RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
SPRED1-201ENST00000299084 KTN1-AS1Q86SY8 53 aa9.66□□□□□ -0.86
SPRED1-201ENST00000299084 LINC00310P59036 64 aa9.65□□□□□ -0.87
SPRED1-201ENST00000299084 C9orf163Q8N9P6 203 aa9.64□□□□□ -0.87
SPRED1-201ENST00000299084 Q8NAQ8 132 aa9.64□□□□□ -0.87
SPRED1-201ENST00000299084 SPTBN4Q9H254 2564 aa9.63□□□□□ -0.87
SPRED1-201ENST00000299084 PCNTO95613 3336 aa9.63□□□□□ -0.87
SPRED1-201ENST00000299084 HRES1P13985 223 aa9.63□□□□□ -0.87
SPRED1-201ENST00000299084 C8orf17Q9NRJ1 99 aa9.62□□□□□ -0.87
SPRED1-201ENST00000299084 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
SPRED1-201ENST00000299084 A0A1B0GVX0 72 aa9.61□□□□□ -0.87
SPRED1-201ENST00000299084 A0A1W2PPR1 153 aa9.61□□□□□ -0.87
SPRED1-201ENST00000299084 WIPF1O43516 503 aa9.61□□□□□ -0.87
SPRED1-201ENST00000299084 LINC00528Q8N1L1 170 aa9.61□□□□□ -0.87
SPRED1-201ENST00000299084 COX8CQ7Z4L0 72 aa9.61□□□□□ -0.87
SPRED1-201ENST00000299084 IGLV1-50A0A075B6I6 118 aa9.59□□□□□ -0.87
SPRED1-201ENST00000299084 A0A096LNJ9 63 aa9.58□□□□□ -0.88
SPRED1-201ENST00000299084 CR1P17927 2039 aa9.58□□□□□ -0.88
SPRED1-201ENST00000299084 C10orf142B7Z368 130 aa9.58□□□□□ -0.88
SPRED1-201ENST00000299084 A0A087WTM6 91 aa9.57□□□□□ -0.88
SPRED1-201ENST00000299084 CEP350Q5VT06 3117 aa9.55□□□□□ -0.88
SPRED1-201ENST00000299084 PLA2G2DQ9UNK4 145 aa9.55□□□□□ -0.88
SPRED1-201ENST00000299084 IGLV7-43P04211 117 aa9.55□□□□□ -0.88
SPRED1-201ENST00000299084 C5orf42Q9H799 3197 aa9.54□□□□□ -0.88
SPRED1-201ENST00000299084 IGLV7-46A0A075B6I9 117 aa9.53□□□□□ -0.88
SPRED1-201ENST00000299084 K7EIL1 84 aa9.53□□□□□ -0.88
SPRED1-201ENST00000299084 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
SPRED1-201ENST00000299084 Q8N1X5 172 aa9.53□□□□□ -0.88
SPRED1-201ENST00000299084 FAM104AQ969W3 186 aa9.52□□□□□ -0.88
SPRED1-201ENST00000299084 PRR15Q8IV56 129 aa9.52□□□□□ -0.89
SPRED1-201ENST00000299084 A0A0A0MQY5 61 aa9.51□□□□□ -0.89
SPRED1-201ENST00000299084 IGFL1Q6UW32 110 aa9.51□□□□□ -0.89
SPRED1-201ENST00000299084 MTORP42345 2549 aa9.51□□□□□ -0.89
SPRED1-201ENST00000299084 Q1T7F1 81 aa9.5□□□□□ -0.89
SPRED1-201ENST00000299084 PRRC2CQ9Y520 2896 aaKnown RBP9.5□□□□□ -0.89
SPRED1-201ENST00000299084 TLX1NBP0CAT3 122 aa9.49□□□□□ -0.89
SPRED1-201ENST00000299084 COL4A2P08572 1712 aa9.48□□□□□ -0.89
SPRED1-201ENST00000299084 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
SPRED1-201ENST00000299084 PSORS1C2Q9UIG4 136 aa9.46□□□□□ -0.89
SPRED1-201ENST00000299084 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
SPRED1-201ENST00000299084 KRTAP10-11P60412 298 aa9.44□□□□□ -0.9
SPRED1-201ENST00000299084 CHD8Q9HCK8 2581 aa9.44□□□□□ -0.9
SPRED1-201ENST00000299084 CEP295Q9C0D2 2601 aa9.43□□□□□ -0.9
SPRED1-201ENST00000299084 USP24Q9UPU5 2620 aa9.43□□□□□ -0.9
SPRED1-201ENST00000299084 C15orf56Q8N910 161 aa9.42□□□□□ -0.9
SPRED1-201ENST00000299084 POLQO75417 2590 aa9.4□□□□□ -0.9
SPRED1-201ENST00000299084 USP9YO00507 2555 aaPredicted RBP9.4□□□□□ -0.9
SPRED1-201ENST00000299084 LINC01546A6NGU7 62 aa9.4□□□□□ -0.9
SPRED1-201ENST00000299084 PRR26Q8N8Z3 221 aa9.39□□□□□ -0.91
SPRED1-201ENST00000299084 A0A0G2JQZ4 141 aa9.38□□□□□ -0.91
SPRED1-201ENST00000299084 A0A1W2PNN7 141 aa9.38□□□□□ -0.91
SPRED1-201ENST00000299084 H3BS24 57 aa9.38□□□□□ -0.91
SPRED1-201ENST00000299084 PRO0461Q9UI25 63 aa9.37□□□□□ -0.91
SPRED1-201ENST00000299084 S4R3F8 94 aa9.37□□□□□ -0.91
SPRED1-201ENST00000299084 PLAC4Q8WY50 150 aa9.37□□□□□ -0.91
SPRED1-201ENST00000299084 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
SPRED1-201ENST00000299084 SPRR4Q96PI1 79 aa9.34□□□□□ -0.91
SPRED1-201ENST00000299084 BPTFQ12830 3046 aa9.33□□□□□ -0.92
SPRED1-201ENST00000299084 SEC61BP60468 96 aaKnown RBP9.31□□□□□ -0.92
SPRED1-201ENST00000299084 Q8N377 158 aa9.3□□□□□ -0.92
SPRED1-201ENST00000299084 KLKP1Q107X0 134 aa9.29□□□□□ -0.92
SPRED1-201ENST00000299084 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
SPRED1-201ENST00000299084 C19orf73Q9NVV2 129 aa9.29□□□□□ -0.92
SPRED1-201ENST00000299084 A0A1B0GU33 70 aa9.29□□□□□ -0.92
SPRED1-201ENST00000299084 FASNP49327 2511 aaKnown RBP9.29□□□□□ -0.92
SPRED1-201ENST00000299084 R4GN34 69 aa9.28□□□□□ -0.92
SPRED1-201ENST00000299084 SPINK7P58062 85 aa9.27□□□□□ -0.92
SPRED1-201ENST00000299084 H7BZZ5 65 aa9.25□□□□□ -0.93
SPRED1-201ENST00000299084 Q5VSD8 79 aa9.25□□□□□ -0.93
SPRED1-201ENST00000299084 CASC10Q5T4H9 136 aa9.23□□□□□ -0.93
SPRED1-201ENST00000299084 H1FX-AS1Q4G0G2 97 aa9.22□□□□□ -0.93
SPRED1-201ENST00000299084 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
SPRED1-201ENST00000299084 SPANXA2-OT1Q8N9U9 137 aa9.22□□□□□ -0.93
SPRED1-201ENST00000299084 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
SPRED1-201ENST00000299084 PRR34Q9NV39 138 aa9.2□□□□□ -0.94
SPRED1-201ENST00000299084 TNP2Q05952 138 aa9.19□□□□□ -0.94
SPRED1-201ENST00000299084 LITAFQ99732 161 aa9.19□□□□□ -0.94
SPRED1-201ENST00000299084 EPG5Q9HCE0 2579 aa9.17□□□□□ -0.94
SPRED1-201ENST00000299084 MKI67P46013 3256 aaKnown RBP9.14□□□□□ -0.95
SPRED1-201ENST00000299084 PRAC1Q96KF2 57 aa9.12□□□□□ -0.95
SPRED1-201ENST00000299084 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.1□□□□□ -0.95
SPRED1-201ENST00000299084 FAM229BQ4G0N7 80 aa9.1□□□□□ -0.95
SPRED1-201ENST00000299084 CHD7Q9P2D1 2997 aa9.09□□□□□ -0.96
SPRED1-201ENST00000299084 LAMA2P24043 3122 aaKnown RBP9.08□□□□□ -0.96
SPRED1-201ENST00000299084 ZCCHC13Q8WW36 166 aaKnown RBP9.07□□□□□ -0.96
SPRED1-201ENST00000299084 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
SPRED1-201ENST00000299084 OXTP01178 125 aa9.03□□□□□ -0.96
SPRED1-201ENST00000299084 BRCA2P51587 3418 aa9.02□□□□□ -0.97
SPRED1-201ENST00000299084 Q75L30 129 aa9.02□□□□□ -0.97
SPRED1-201ENST00000299084 M0QZ58 72 aa9.01□□□□□ -0.97
SPRED1-201ENST00000299084 MGAM2Q2M2H8 2515 aa9.01□□□□□ -0.97
SPRED1-201ENST00000299084 A0A1W2PNM2 257 aa9.01□□□□□ -0.97
SPRED1-201ENST00000299084 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
SPRED1-201ENST00000299084 CFAP54Q96N23 3096 aa8.99□□□□□ -0.97
SPRED1-201ENST00000299084 GIG44P09565 113 aaPredicted RBP8.99□□□□□ -0.97
SPRED1-201ENST00000299084 XIRP2A4UGR9 3374 aa8.98□□□□□ -0.97
SPRED1-201ENST00000299084 Q8N9P0 234 aaPredicted RBP8.96□□□□□ -0.98
SPRED1-201ENST00000299084 LAMA3Q16787 3333 aa8.95□□□□□ -0.98
SPRED1-201ENST00000299084 ROMO1P60602 79 aa8.92□□□□□ -0.98
SPRED1-201ENST00000299084 HTTP42858 3142 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms