RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 Q6ZRX8 168 aa7.72□□□□□ -1.17
SNIP1-201ENST00000296215 C4orf3Q8WVX3 66 aa7.72□□□□□ -1.17
SNIP1-201ENST00000296215 DEFB135Q30KP9 77 aa7.72□□□□□ -1.17
SNIP1-201ENST00000296215 LUZP6Q538Z0 58 aa7.71□□□□□ -1.17
SNIP1-201ENST00000296215 POLQO75417 2590 aa7.71□□□□□ -1.18
SNIP1-201ENST00000296215 MUC22E2RYF6 1773 aaPredicted RBP7.71□□□□□ -1.18
SNIP1-201ENST00000296215 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.18
SNIP1-201ENST00000296215 DEFB131BA0A096LNP1 70 aa7.7□□□□□ -1.18
SNIP1-201ENST00000296215 F8P00451 2351 aa7.7□□□□□ -1.18
SNIP1-201ENST00000296215 LMO4P61968 165 aa7.69□□□□□ -1.18
SNIP1-201ENST00000296215 USP34Q70CQ2 3546 aa7.69□□□□□ -1.18
SNIP1-201ENST00000296215 TLN1Q9Y490 2541 aaKnown RBP7.69□□□□□ -1.18
SNIP1-201ENST00000296215 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
SNIP1-201ENST00000296215 LINC00612Q8N6U2 182 aa7.69□□□□□ -1.18
SNIP1-201ENST00000296215 CDH23Q9H251 3354 aa7.68□□□□□ -1.18
SNIP1-201ENST00000296215 IGLV5-48A0A075B6I7 105 aa7.67□□□□□ -1.18
SNIP1-201ENST00000296215 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
SNIP1-201ENST00000296215 ROMO1P60602 79 aa7.66□□□□□ -1.18
SNIP1-201ENST00000296215 HRES1P13985 223 aa7.65□□□□□ -1.18
SNIP1-201ENST00000296215 IGKV2D-30A0A075B6S6 120 aa7.65□□□□□ -1.19
SNIP1-201ENST00000296215 IGKV2-30P06310 120 aa7.65□□□□□ -1.19
SNIP1-201ENST00000296215 IGFL1Q6UW32 110 aa7.63□□□□□ -1.19
SNIP1-201ENST00000296215 MRPL34Q9BQ48 92 aaKnown RBP7.63□□□□□ -1.19
SNIP1-201ENST00000296215 RAI1Q7Z5J4 1906 aaPredicted RBP7.63□□□□□ -1.19
SNIP1-201ENST00000296215 GVQW2A0A096LPI5 108 aaPredicted RBP7.63□□□□□ -1.19
SNIP1-201ENST00000296215 C18orf65Q6ZTR6 163 aa7.63□□□□□ -1.19
SNIP1-201ENST00000296215 XIRP2A4UGR9 3374 aa7.62□□□□□ -1.19
SNIP1-201ENST00000296215 ANKRD11Q6UB99 2663 aaPredicted RBP7.62□□□□□ -1.19
SNIP1-201ENST00000296215 A0A0G2JQZ4 141 aa7.61□□□□□ -1.19
SNIP1-201ENST00000296215 A0A1W2PNN7 141 aa7.61□□□□□ -1.19
SNIP1-201ENST00000296215 X6R8D5 127 aa7.6□□□□□ -1.19
SNIP1-201ENST00000296215 VCANP13611 3396 aa7.59□□□□□ -1.19
SNIP1-201ENST00000296215 CR1P17927 2039 aa7.59□□□□□ -1.2
SNIP1-201ENST00000296215 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
SNIP1-201ENST00000296215 USP9XQ93008 2570 aaPredicted RBP7.58□□□□□ -1.2
SNIP1-201ENST00000296215 SPRR4Q96PI1 79 aa7.58□□□□□ -1.2
SNIP1-201ENST00000296215 NDUFAF8A1L188 74 aa7.57□□□□□ -1.2
SNIP1-201ENST00000296215 A0A1W2PNU3 283 aaPredicted RBP7.57□□□□□ -1.2
SNIP1-201ENST00000296215 KLK9Q2XQG4 91 aa7.57□□□□□ -1.2
SNIP1-201ENST00000296215 IGLV1-50A0A075B6I6 118 aa7.56□□□□□ -1.2
SNIP1-201ENST00000296215 Q6ZR54 194 aa7.56□□□□□ -1.2
SNIP1-201ENST00000296215 CEP295Q9C0D2 2601 aa7.56□□□□□ -1.2
SNIP1-201ENST00000296215 LCE6AA0A183 80 aa7.55□□□□□ -1.2
SNIP1-201ENST00000296215 DNAH10OSP0CZ25 163 aa7.55□□□□□ -1.2
SNIP1-201ENST00000296215 TLX1NBP0CAT3 122 aa7.55□□□□□ -1.2
SNIP1-201ENST00000296215 KRTAP25-1Q3LHN0 102 aa7.54□□□□□ -1.2
SNIP1-201ENST00000296215 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
SNIP1-201ENST00000296215 EYSQ5T1H1 3165 aa7.53□□□□□ -1.2
SNIP1-201ENST00000296215 TLN2Q9Y4G6 2542 aa7.52□□□□□ -1.21
SNIP1-201ENST00000296215 A0A087X002 238 aa7.51□□□□□ -1.21
SNIP1-201ENST00000296215 UNC80Q8N2C7 3258 aa7.51□□□□□ -1.21
SNIP1-201ENST00000296215 COL4A2P08572 1712 aa7.5□□□□□ -1.21
SNIP1-201ENST00000296215 CHTF8P0CG12 524 aa7.5□□□□□ -1.21
SNIP1-201ENST00000296215 FAM229AH3BQW9 127 aa7.5□□□□□ -1.21
SNIP1-201ENST00000296215 TNRC18O15417 2968 aaPredicted RBP7.5□□□□□ -1.21
SNIP1-201ENST00000296215 CNBPP62633 177 aaKnown RBP7.49□□□□□ -1.21
SNIP1-201ENST00000296215 SETD2Q9BYW2 2564 aaPredicted RBP7.49□□□□□ -1.21
SNIP1-201ENST00000296215 COL27A1Q8IZC6 1860 aaPredicted RBP7.49□□□□□ -1.21
SNIP1-201ENST00000296215 HTTP42858 3142 aa7.48□□□□□ -1.21
SNIP1-201ENST00000296215 RTL8CO15255 209 aa7.47□□□□□ -1.21
SNIP1-201ENST00000296215 Q8NDZ9 215 aa7.47□□□□□ -1.21
SNIP1-201ENST00000296215 PIEZO2Q9H5I5 2752 aa7.47□□□□□ -1.21
SNIP1-201ENST00000296215 A0A1B0GVX0 72 aa7.46□□□□□ -1.21
SNIP1-201ENST00000296215 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.22
SNIP1-201ENST00000296215 CIRBP-AS1Q8TBR5 109 aa7.46□□□□□ -1.22
SNIP1-201ENST00000296215 NUPR2A6NF83 97 aa7.46□□□□□ -1.22
SNIP1-201ENST00000296215 C14orf177Q52M58 125 aa7.46□□□□□ -1.22
SNIP1-201ENST00000296215 SETXQ7Z333 2677 aaKnown RBP7.45□□□□□ -1.22
SNIP1-201ENST00000296215 ACANP16112 2415 aa7.44□□□□□ -1.22
SNIP1-201ENST00000296215 Q6YL49 198 aa7.43□□□□□ -1.22
SNIP1-201ENST00000296215 C19orf73Q9NVV2 129 aa7.43□□□□□ -1.22
SNIP1-201ENST00000296215 DNAH14Q0VDD8 3507 aa7.41□□□□□ -1.22
SNIP1-201ENST00000296215 PRRC2CQ9Y520 2896 aaKnown RBP7.41□□□□□ -1.22
SNIP1-201ENST00000296215 RANBP2P49792 3224 aaKnown RBP7.4□□□□□ -1.23
SNIP1-201ENST00000296215 FAM168BA1KXE4 195 aa7.4□□□□□ -1.23
SNIP1-201ENST00000296215 APLNQ9ULZ1 77 aa7.4□□□□□ -1.23
SNIP1-201ENST00000296215 PRUNE2Q8WUY3 3088 aa7.4□□□□□ -1.23
SNIP1-201ENST00000296215 MMP24-AS1A0A0U1RRL7 71 aa7.39□□□□□ -1.23
SNIP1-201ENST00000296215 IGLV5-37A0A075B6J1 123 aa7.39□□□□□ -1.23
SNIP1-201ENST00000296215 A0A1B0GU33 70 aa7.39□□□□□ -1.23
SNIP1-201ENST00000296215 LY6G6CO95867 125 aa7.39□□□□□ -1.23
SNIP1-201ENST00000296215 MYO15AQ9UKN7 3530 aa7.39□□□□□ -1.23
SNIP1-201ENST00000296215 HECTD1Q9ULT8 2610 aa7.38□□□□□ -1.23
SNIP1-201ENST00000296215 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
SNIP1-201ENST00000296215 SPEGQ15772 3267 aa7.36□□□□□ -1.23
SNIP1-201ENST00000296215 FLG2Q5D862 2391 aaPredicted RBP7.36□□□□□ -1.23
SNIP1-201ENST00000296215 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
SNIP1-201ENST00000296215 C15orf56Q8N910 161 aa7.35□□□□□ -1.23
SNIP1-201ENST00000296215 KRTAP29-1A8MX34 341 aaPredicted RBP7.34□□□□□ -1.23
SNIP1-201ENST00000296215 SZT2Q5T011 3432 aa7.33□□□□□ -1.24
SNIP1-201ENST00000296215 SMR3AQ99954 134 aa7.32□□□□□ -1.24
SNIP1-201ENST00000296215 MAST4O15021 2626 aa7.32□□□□□ -1.24
SNIP1-201ENST00000296215 A8MUU9 505 aa7.32□□□□□ -1.24
SNIP1-201ENST00000296215 PRR34Q9NV39 138 aa7.32□□□□□ -1.24
SNIP1-201ENST00000296215 LINC00483Q53H64 154 aa7.31□□□□□ -1.24
SNIP1-201ENST00000296215 ZNF861PO60384 105 aa7.29□□□□□ -1.24
SNIP1-201ENST00000296215 A0A0D9SG42 100 aa7.29□□□□□ -1.24
SNIP1-201ENST00000296215 USP9YO00507 2555 aaPredicted RBP7.28□□□□□ -1.24
SNIP1-201ENST00000296215 LINC01556Q5JQF7 62 aa7.28□□□□□ -1.24
SNIP1-201ENST00000296215 KRTAP10-9P60411 292 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms