RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 COL7A1Q02388 2944 aa10.33□□□□□ -0.76
NCKIPSD-201ENST00000294129 J3KT08 172 aa10.33□□□□□ -0.76
NCKIPSD-201ENST00000294129 UPK3BQ9BT76 320 aa10.33□□□□□ -0.76
NCKIPSD-201ENST00000294129 HAMPP81172 84 aa10.32□□□□□ -0.76
NCKIPSD-201ENST00000294129 TM2D3Q9BRN9 247 aa10.31□□□□□ -0.76
NCKIPSD-201ENST00000294129 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.31□□□□□ -0.76
NCKIPSD-201ENST00000294129 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
NCKIPSD-201ENST00000294129 GHRHP01286 108 aa10.3□□□□□ -0.76
NCKIPSD-201ENST00000294129 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
NCKIPSD-201ENST00000294129 LINC00528Q8N1L1 170 aa10.29□□□□□ -0.76
NCKIPSD-201ENST00000294129 LOC110117498A0A087WWA1 95 aa10.27□□□□□ -0.76
NCKIPSD-201ENST00000294129 SCXQ7RTU7 201 aa10.27□□□□□ -0.76
NCKIPSD-201ENST00000294129 TMEM258P61165 79 aa10.26□□□□□ -0.77
NCKIPSD-201ENST00000294129 ATP5EP2Q5VTU8 51 aa10.26□□□□□ -0.77
NCKIPSD-201ENST00000294129 DPH3Q96FX2 82 aa10.26□□□□□ -0.77
NCKIPSD-201ENST00000294129 CSMD3Q7Z407 3707 aa10.26□□□□□ -0.77
NCKIPSD-201ENST00000294129 Q6ZVQ6 151 aa10.25□□□□□ -0.77
NCKIPSD-201ENST00000294129 TRBV7-6A0A0J9YX20 115 aa10.24□□□□□ -0.77
NCKIPSD-201ENST00000294129 DNAH10Q8IVF4 4471 aa10.23□□□□□ -0.77
NCKIPSD-201ENST00000294129 RPS28P62857 69 aaKnown RBP10.23□□□□□ -0.77
NCKIPSD-201ENST00000294129 C20orf197Q8N268 126 aa10.23□□□□□ -0.77
NCKIPSD-201ENST00000294129 LINC01547P58512 204 aaPredicted RBP10.22□□□□□ -0.77
NCKIPSD-201ENST00000294129 KCNQ1DNQ9H478 68 aa10.22□□□□□ -0.77
NCKIPSD-201ENST00000294129 RMI2Q96E14 147 aa10.21□□□□□ -0.77
NCKIPSD-201ENST00000294129 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.78
NCKIPSD-201ENST00000294129 TRBV7-4A0A0J9YYF1 115 aa10.21□□□□□ -0.78
NCKIPSD-201ENST00000294129 F8WDY8 70 aa10.2□□□□□ -0.78
NCKIPSD-201ENST00000294129 OXTP01178 125 aa10.2□□□□□ -0.78
NCKIPSD-201ENST00000294129 KRTAP1-5Q9BYS1 174 aa10.2□□□□□ -0.78
NCKIPSD-201ENST00000294129 UBE2DNLQ8IWF7 75 aa10.2□□□□□ -0.78
NCKIPSD-201ENST00000294129 ETDCA0A1B0GVM5 59 aa10.2□□□□□ -0.78
NCKIPSD-201ENST00000294129 H3BQ85 93 aa10.2□□□□□ -0.78
NCKIPSD-201ENST00000294129 PDE6GP18545 87 aa10.19□□□□□ -0.78
NCKIPSD-201ENST00000294129 KRTAP7-1Q8IUC3 87 aa10.19□□□□□ -0.78
NCKIPSD-201ENST00000294129 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.19□□□□□ -0.78
NCKIPSD-201ENST00000294129 PSCAO43653 123 aa10.19□□□□□ -0.78
NCKIPSD-201ENST00000294129 C3orf84H3BNL1 204 aa10.18□□□□□ -0.78
NCKIPSD-201ENST00000294129 ST20-AS1Q8NBB2 130 aa10.18□□□□□ -0.78
NCKIPSD-201ENST00000294129 TLX1NBP0CAT3 122 aa10.17□□□□□ -0.78
NCKIPSD-201ENST00000294129 DNAH1Q9P2D7 4330 aa10.17□□□□□ -0.78
NCKIPSD-201ENST00000294129 Q8N377 158 aa10.17□□□□□ -0.78
NCKIPSD-201ENST00000294129 Q9BRP9 147 aa10.17□□□□□ -0.78
NCKIPSD-201ENST00000294129 IGLV1-50A0A075B6I6 118 aa10.16□□□□□ -0.78
NCKIPSD-201ENST00000294129 MRPL55Q7Z7F7 128 aaKnown RBP10.16□□□□□ -0.78
NCKIPSD-201ENST00000294129 UBE2BP63146 152 aa10.15□□□□□ -0.78
NCKIPSD-201ENST00000294129 Q6ZRX8 168 aa10.15□□□□□ -0.78
NCKIPSD-201ENST00000294129 Q8N9L7 120 aa10.14□□□□□ -0.79
NCKIPSD-201ENST00000294129 MDFIQ99750 246 aa10.14□□□□□ -0.79
NCKIPSD-201ENST00000294129 ERC2-IT1O76042 136 aa10.13□□□□□ -0.79
NCKIPSD-201ENST00000294129 DNAH9Q9NYC9 4486 aa10.12□□□□□ -0.79
NCKIPSD-201ENST00000294129 A0A096LNI7 61 aa10.11□□□□□ -0.79
NCKIPSD-201ENST00000294129 PRYO14603 147 aa10.11□□□□□ -0.79
NCKIPSD-201ENST00000294129 DHRS4-AS1Q9P1J3 65 aa10.11□□□□□ -0.79
NCKIPSD-201ENST00000294129 PLA2G2DQ9UNK4 145 aa10.11□□□□□ -0.79
NCKIPSD-201ENST00000294129 SNURFQ9Y675 71 aa10.11□□□□□ -0.79
NCKIPSD-201ENST00000294129 DNAH7Q8WXX0 4024 aa10.1□□□□□ -0.79
NCKIPSD-201ENST00000294129 C4orf26Q17RF5 130 aa10.1□□□□□ -0.79
NCKIPSD-201ENST00000294129 C5orf47Q569G3 176 aa10.1□□□□□ -0.79
NCKIPSD-201ENST00000294129 SRRM2Q9UQ35 2752 aaKnown RBP10.1□□□□□ -0.79
NCKIPSD-201ENST00000294129 TRAV7A0A075B6U4 112 aa10.1□□□□□ -0.79
NCKIPSD-201ENST00000294129 KRTAP4-16G5E9R7 235 aaPredicted RBP10.1□□□□□ -0.79
NCKIPSD-201ENST00000294129 CHTF8P0CG12 524 aa10.08□□□□□ -0.8
NCKIPSD-201ENST00000294129 NREPQ16612 68 aa10.08□□□□□ -0.8
NCKIPSD-201ENST00000294129 PRLHP81277 87 aa10.08□□□□□ -0.8
NCKIPSD-201ENST00000294129 IGLV5-37A0A075B6J1 123 aa10.07□□□□□ -0.8
NCKIPSD-201ENST00000294129 H7BZZ5 65 aa10.07□□□□□ -0.8
NCKIPSD-201ENST00000294129 CXCL6P80162 114 aa10.07□□□□□ -0.8
NCKIPSD-201ENST00000294129 REG3GQ6UW15 175 aa10.07□□□□□ -0.8
NCKIPSD-201ENST00000294129 A0A0G2JQZ4 141 aa10.07□□□□□ -0.8
NCKIPSD-201ENST00000294129 FAM236DA0A1B0GTK5 79 aa10.07□□□□□ -0.8
NCKIPSD-201ENST00000294129 A0A1W2PNN7 141 aa10.07□□□□□ -0.8
NCKIPSD-201ENST00000294129 FAM236CP0DP71 79 aa10.07□□□□□ -0.8
NCKIPSD-201ENST00000294129 SPRR1AP35321 89 aa10.06□□□□□ -0.8
NCKIPSD-201ENST00000294129 APLNQ9ULZ1 77 aa10.05□□□□□ -0.8
NCKIPSD-201ENST00000294129 BPY2O14599 106 aa10.05□□□□□ -0.8
NCKIPSD-201ENST00000294129 C1orf137Q5JT78 98 aa10.05□□□□□ -0.8
NCKIPSD-201ENST00000294129 Q5XG85 94 aa10.05□□□□□ -0.8
NCKIPSD-201ENST00000294129 HRCT1Q6UXD1 115 aa10.05□□□□□ -0.8
NCKIPSD-201ENST00000294129 HIGD2AQ9BW72 106 aa10.04□□□□□ -0.8
NCKIPSD-201ENST00000294129 FUSP35637 526 aaKnown RBP eCLIP10.03□□□□□ -0.8
NCKIPSD-201ENST00000294129 IGLV5-48A0A075B6I7 105 aa10.02□□□□□ -0.81
NCKIPSD-201ENST00000294129 A0A1W2PNM2 257 aa10.02□□□□□ -0.81
NCKIPSD-201ENST00000294129 C16orf90A8MZG2 172 aa10.02□□□□□ -0.81
NCKIPSD-201ENST00000294129 BCE1O60756 84 aa10.02□□□□□ -0.81
NCKIPSD-201ENST00000294129 KLKP1Q107X0 134 aa10.01□□□□□ -0.81
NCKIPSD-201ENST00000294129 F8WEM9 126 aa10.01□□□□□ -0.81
NCKIPSD-201ENST00000294129 PHF5AQ7RTV0 110 aaKnown RBP10□□□□□ -0.81
NCKIPSD-201ENST00000294129 PLECQ15149 4684 aaKnown RBP10□□□□□ -0.81
NCKIPSD-201ENST00000294129 B9D2Q9BPU9 175 aa9.98□□□□□ -0.81
NCKIPSD-201ENST00000294129 CNBPP62633 177 aaKnown RBP9.97□□□□□ -0.81
NCKIPSD-201ENST00000294129 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
NCKIPSD-201ENST00000294129 IGKV4-1P06312 121 aa9.96□□□□□ -0.81
NCKIPSD-201ENST00000294129 TNP2Q05952 138 aa9.96□□□□□ -0.82
NCKIPSD-201ENST00000294129 SERP1Q9Y6X1 66 aa9.95□□□□□ -0.82
NCKIPSD-201ENST00000294129 Q8NBF4 154 aa9.95□□□□□ -0.82
NCKIPSD-201ENST00000294129 LINC00476Q8WZB0 136 aa9.94□□□□□ -0.82
NCKIPSD-201ENST00000294129 SMIM29Q86T20 159 aa9.93□□□□□ -0.82
NCKIPSD-201ENST00000294129 NBDYA0A0U1RRE5 68 aa9.93□□□□□ -0.82
NCKIPSD-201ENST00000294129 DEFB116Q30KQ4 102 aa9.93□□□□□ -0.82
NCKIPSD-201ENST00000294129 C14orf177Q52M58 125 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms