RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 SSBP3-AS1Q7Z2R9 100 aa7.95□□□□□ -1.14
TPM1-202ENST00000288398 FAT4Q6V0I7 4981 aa7.95□□□□□ -1.14
TPM1-202ENST00000288398 TSPEAR-AS2P59090 65 aa7.94□□□□□ -1.14
TPM1-202ENST00000288398 SEC61BP60468 96 aaKnown RBP7.94□□□□□ -1.14
TPM1-202ENST00000288398 KRTAP13-3Q3SY46 172 aa7.94□□□□□ -1.14
TPM1-202ENST00000288398 C9orf153Q5TBE3 101 aa7.94□□□□□ -1.14
TPM1-202ENST00000288398 Q6ZRX8 168 aa7.94□□□□□ -1.14
TPM1-202ENST00000288398 CBY1Q9Y3M2 126 aa7.94□□□□□ -1.14
TPM1-202ENST00000288398 LOC107984156A0A0G2JMH3 177 aa7.93□□□□□ -1.14
TPM1-202ENST00000288398 SLC25A20O43772 301 aa7.93□□□□□ -1.14
TPM1-202ENST00000288398 SERF1AO75920 110 aa7.93□□□□□ -1.14
TPM1-202ENST00000288398 FABP4P15090 132 aa7.93□□□□□ -1.14
TPM1-202ENST00000288398 HINT1P49773 126 aaPredicted RBP7.93□□□□□ -1.14
TPM1-202ENST00000288398 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
TPM1-202ENST00000288398 ARL17AQ8IVW1 177 aa7.93□□□□□ -1.14
TPM1-202ENST00000288398 TRAV23DV6A0A075B6W5 121 aa7.92□□□□□ -1.14
TPM1-202ENST00000288398 ERC2-IT1O76042 136 aa7.92□□□□□ -1.14
TPM1-202ENST00000288398 NDUFC2O95298 119 aa7.92□□□□□ -1.14
TPM1-202ENST00000288398 IGKCP01834 107 aa7.92□□□□□ -1.14
TPM1-202ENST00000288398 HIST1H2BLQ99880 126 aa7.92□□□□□ -1.14
TPM1-202ENST00000288398 MUC17Q685J3 4493 aa7.91□□□□□ -1.14
TPM1-202ENST00000288398 ASB16-AS1Q495Z4 193 aa7.91□□□□□ -1.14
TPM1-202ENST00000288398 LINC01547P58512 204 aaPredicted RBP7.9□□□□□ -1.14
TPM1-202ENST00000288398 NPC2P61916 151 aa7.9□□□□□ -1.14
TPM1-202ENST00000288398 PMCHL2Q9BQD1 86 aa7.9□□□□□ -1.14
TPM1-202ENST00000288398 Q9BRP9 147 aa7.9□□□□□ -1.14
TPM1-202ENST00000288398 ZNF73O43830 326 aaPredicted RBP7.89□□□□□ -1.15
TPM1-202ENST00000288398 IGLV6-57P01721 117 aa7.89□□□□□ -1.15
TPM1-202ENST00000288398 Q8N377 158 aa7.89□□□□□ -1.15
TPM1-202ENST00000288398 S100A2P29034 98 aa7.88□□□□□ -1.15
TPM1-202ENST00000288398 SLC25A34Q6PIV7 304 aa7.87□□□□□ -1.15
TPM1-202ENST00000288398 SMIM6P0DI80 62 aa7.86□□□□□ -1.15
TPM1-202ENST00000288398 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
TPM1-202ENST00000288398 OR13C6PQ8NH95 151 aa7.86□□□□□ -1.15
TPM1-202ENST00000288398 A0A0J9YXY3 114 aa7.85□□□□□ -1.15
TPM1-202ENST00000288398 LIMD2Q9BT23 127 aa7.84□□□□□ -1.15
TPM1-202ENST00000288398 E9PLD3 99 aa7.83□□□□□ -1.16
TPM1-202ENST00000288398 PYY3Q5JQD4 70 aa7.83□□□□□ -1.16
TPM1-202ENST00000288398 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
TPM1-202ENST00000288398 AKR1D1P51857 326 aa7.82□□□□□ -1.16
TPM1-202ENST00000288398 ADAMTSL4-AS1Q5T5F5 129 aa7.82□□□□□ -1.16
TPM1-202ENST00000288398 SOSTDC1Q6X4U4 206 aa7.82□□□□□ -1.16
TPM1-202ENST00000288398 SPANXCQ9NY87 97 aa7.82□□□□□ -1.16
TPM1-202ENST00000288398 DHRS4-AS1Q9P1J3 65 aa7.82□□□□□ -1.16
TPM1-202ENST00000288398 LAMTOR3Q9UHA4 124 aa7.81□□□□□ -1.16
TPM1-202ENST00000288398 XP32Q5T750 250 aa7.8□□□□□ -1.16
TPM1-202ENST00000288398 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
TPM1-202ENST00000288398 HRCT1Q6UXD1 115 aa7.79□□□□□ -1.16
TPM1-202ENST00000288398 LINC00308Q8TCZ7 52 aa7.79□□□□□ -1.16
TPM1-202ENST00000288398 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
TPM1-202ENST00000288398 EIF4EBP3O60516 100 aaPredicted RBP7.78□□□□□ -1.16
TPM1-202ENST00000288398 TIMM17BO60830 172 aa7.78□□□□□ -1.16
TPM1-202ENST00000288398 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
TPM1-202ENST00000288398 SYS1-DBNDD2H3BUS1 97 aa7.77□□□□□ -1.17
TPM1-202ENST00000288398 COX7BP24311 80 aa7.77□□□□□ -1.17
TPM1-202ENST00000288398 TAL2Q16559 108 aa7.77□□□□□ -1.17
TPM1-202ENST00000288398 C12orf57Q99622 126 aa7.77□□□□□ -1.17
TPM1-202ENST00000288398 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
TPM1-202ENST00000288398 PET117Q6UWS5 81 aa7.76□□□□□ -1.17
TPM1-202ENST00000288398 SPRR1BP22528 89 aa7.75□□□□□ -1.17
TPM1-202ENST00000288398 KRTAP4-1Q9BYQ7 146 aa7.75□□□□□ -1.17
TPM1-202ENST00000288398 DEFB105AQ8NG35 78 aa7.74□□□□□ -1.17
TPM1-202ENST00000288398 COPS9Q8WXC6 57 aa7.74□□□□□ -1.17
TPM1-202ENST00000288398 ELOF1P60002 83 aaKnown RBP7.73□□□□□ -1.17
TPM1-202ENST00000288398 C6orf99Q4VX62 202 aa7.73□□□□□ -1.17
TPM1-202ENST00000288398 LINC01545Q5VT33 79 aa7.73□□□□□ -1.17
TPM1-202ENST00000288398 SCGB1D4Q6XE38 83 aa7.73□□□□□ -1.17
TPM1-202ENST00000288398 LITAFQ99732 161 aa7.73□□□□□ -1.17
TPM1-202ENST00000288398 PRO1933Q9H354 126 aa7.73□□□□□ -1.17
TPM1-202ENST00000288398 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
TPM1-202ENST00000288398 Q1RN00 199 aa7.72□□□□□ -1.17
TPM1-202ENST00000288398 TEX49A0A1B0GTD5 131 aa7.71□□□□□ -1.18
TPM1-202ENST00000288398 H7C2G1 150 aa7.71□□□□□ -1.18
TPM1-202ENST00000288398 KRTDAPP60985 99 aa7.7□□□□□ -1.18
TPM1-202ENST00000288398 CD164Q04900 197 aa7.7□□□□□ -1.18
TPM1-202ENST00000288398 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
TPM1-202ENST00000288398 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
TPM1-202ENST00000288398 IGLV8-61A0A075B6I0 122 aa7.69□□□□□ -1.18
TPM1-202ENST00000288398 C20orf202A1L168 122 aa7.69□□□□□ -1.18
TPM1-202ENST00000288398 SCGB1D1O95968 90 aa7.69□□□□□ -1.18
TPM1-202ENST00000288398 PCOTHQ58A44 107 aa7.69□□□□□ -1.18
TPM1-202ENST00000288398 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
TPM1-202ENST00000288398 A6NDN8 102 aa7.68□□□□□ -1.18
TPM1-202ENST00000288398 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
TPM1-202ENST00000288398 TTTY13Q9BZ97 58 aa7.67□□□□□ -1.18
TPM1-202ENST00000288398 NHP2Q9NX24 153 aaKnown RBP7.66□□□□□ -1.18
TPM1-202ENST00000288398 IFITM1P13164 125 aa7.65□□□□□ -1.18
TPM1-202ENST00000288398 A4D1N5 150 aa7.64□□□□□ -1.19
TPM1-202ENST00000288398 LCE2DQ5TA82 110 aaPredicted RBP7.64□□□□□ -1.19
TPM1-202ENST00000288398 Q6ZVH6 145 aa7.64□□□□□ -1.19
TPM1-202ENST00000288398 VAMP8Q9BV40 100 aa7.63□□□□□ -1.19
TPM1-202ENST00000288398 F8WEM9 126 aa7.62□□□□□ -1.19
TPM1-202ENST00000288398 CFC1BP0CG36 223 aa7.62□□□□□ -1.19
TPM1-202ENST00000288398 TRAV13-2A0A0B4J235 113 aa7.61□□□□□ -1.19
TPM1-202ENST00000288398 TSTD3H0UI37 97 aa7.61□□□□□ -1.19
TPM1-202ENST00000288398 TCL1BO95988 128 aa7.61□□□□□ -1.19
TPM1-202ENST00000288398 Q5XG85 94 aa7.61□□□□□ -1.19
TPM1-202ENST00000288398 IGLV5-48A0A075B6I7 105 aa7.6□□□□□ -1.19
TPM1-202ENST00000288398 VAMP3Q15836 100 aa7.59□□□□□ -1.19
TPM1-202ENST00000288398 C1orf195Q5TG92 126 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms