RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SMIM11BQ8TCY0 68 aa13.44□□□□□ -0.26
PDLIM3-203ENST00000284771 SPRR1AP35321 89 aa13.44□□□□□ -0.26
PDLIM3-203ENST00000284771 REG3GQ6UW15 175 aa13.44□□□□□ -0.26
PDLIM3-203ENST00000284771 KRTAP4-16G5E9R7 235 aaPredicted RBP13.43□□□□□ -0.26
PDLIM3-203ENST00000284771 H7C2G1 150 aa13.43□□□□□ -0.26
PDLIM3-203ENST00000284771 PRYO14603 147 aa13.42□□□□□ -0.26
PDLIM3-203ENST00000284771 ZNF73O43830 326 aaPredicted RBP13.41□□□□□ -0.26
PDLIM3-203ENST00000284771 C1orf137Q5JT78 98 aa13.4□□□□□ -0.26
PDLIM3-203ENST00000284771 KRTAP10-4P60372 401 aaPredicted RBP13.39□□□□□ -0.27
PDLIM3-203ENST00000284771 C6orf99Q4VX62 202 aa13.39□□□□□ -0.27
PDLIM3-203ENST00000284771 BCE1O60756 84 aa13.37□□□□□ -0.27
PDLIM3-203ENST00000284771 RPL28P46779 137 aaKnown RBP13.37□□□□□ -0.27
PDLIM3-203ENST00000284771 TSPAN13O95857 204 aa13.36□□□□□ -0.27
PDLIM3-203ENST00000284771 RPL37AP61513 92 aaKnown RBP13.36□□□□□ -0.27
PDLIM3-203ENST00000284771 DIRC1Q969H9 104 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 CBY1Q9Y3M2 126 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 B5MCH6 92 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 PRLHP81277 87 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 Q1RN00 199 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 FAM19A1Q7Z5A9 133 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 KRTAP13-1Q8IUC0 172 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 IGLV7-43P04211 117 aa13.33□□□□□ -0.28
PDLIM3-203ENST00000284771 SRRM2Q9UQ35 2752 aaKnown RBP13.33□□□□□ -0.28
PDLIM3-203ENST00000284771 Q8N1X5 172 aa13.32□□□□□ -0.28
PDLIM3-203ENST00000284771 ETDCA0A1B0GVM5 59 aa13.31□□□□□ -0.28
PDLIM3-203ENST00000284771 Q5VSD8 79 aa13.31□□□□□ -0.28
PDLIM3-203ENST00000284771 FAM229AH3BQW9 127 aa13.31□□□□□ -0.28
PDLIM3-203ENST00000284771 TRIAP1O43715 76 aa13.3□□□□□ -0.28
PDLIM3-203ENST00000284771 ELOF1P60002 83 aaKnown RBP13.3□□□□□ -0.28
PDLIM3-203ENST00000284771 Q6ZRX8 168 aa13.3□□□□□ -0.28
PDLIM3-203ENST00000284771 NAA38Q9BRA0 125 aaKnown RBP13.3□□□□□ -0.28
PDLIM3-203ENST00000284771 TAX1BP3O14907 124 aa13.29□□□□□ -0.28
PDLIM3-203ENST00000284771 Q9BRP9 147 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 TRBV7-6A0A0J9YX20 115 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 H0Y9J4 135 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 ZNF861PO60384 105 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 UBE2AP49459 152 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 COX7BP24311 80 aa13.27□□□□□ -0.29
PDLIM3-203ENST00000284771 SMCR5Q8TEV8 140 aa13.26□□□□□ -0.29
PDLIM3-203ENST00000284771 HERC2O95714 4834 aa13.26□□□□□ -0.29
PDLIM3-203ENST00000284771 PLA2G1BP04054 148 aaKnown RBP13.25□□□□□ -0.29
PDLIM3-203ENST00000284771 PSMB2P49721 201 aa13.24□□□□□ -0.29
PDLIM3-203ENST00000284771 COL5A1-AS1Q5SY13 56 aa13.24□□□□□ -0.29
PDLIM3-203ENST00000284771 VAMP3Q15836 100 aa13.23□□□□□ -0.29
PDLIM3-203ENST00000284771 ERC2-IT1O76042 136 aa13.22□□□□□ -0.29
PDLIM3-203ENST00000284771 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
PDLIM3-203ENST00000284771 HIGD2AQ9BW72 106 aa13.22□□□□□ -0.29
PDLIM3-203ENST00000284771 KRTAP4-5Q9BYR2 181 aa13.22□□□□□ -0.29
PDLIM3-203ENST00000284771 H3BUT2 72 aa13.21□□□□□ -0.29
PDLIM3-203ENST00000284771 C9orf118A6NHY6 69 aa13.21□□□□□ -0.3
PDLIM3-203ENST00000284771 LINC00575Q6W349 94 aa13.21□□□□□ -0.3
PDLIM3-203ENST00000284771 CLEC2BQ92478 149 aa13.19□□□□□ -0.3
PDLIM3-203ENST00000284771 H0YGX0 51 aa13.18□□□□□ -0.3
PDLIM3-203ENST00000284771 COX6CP09669 75 aa13.17□□□□□ -0.3
PDLIM3-203ENST00000284771 INAFM2P0DMQ5 153 aa13.17□□□□□ -0.3
PDLIM3-203ENST00000284771 SCGB1C2P0DMR2 95 aa13.16□□□□□ -0.3
PDLIM3-203ENST00000284771 DHRS4-AS1Q9P1J3 65 aa13.16□□□□□ -0.3
PDLIM3-203ENST00000284771 SPINK6Q6UWN8 80 aa13.15□□□□□ -0.3
PDLIM3-203ENST00000284771 hADV29S1A0JD25 119 aa13.13□□□□□ -0.31
PDLIM3-203ENST00000284771 ST20-AS1Q8NBB2 130 aa13.13□□□□□ -0.31
PDLIM3-203ENST00000284771 A0A1W2PPM0 123 aa13.12□□□□□ -0.31
PDLIM3-203ENST00000284771 SLC25A20O43772 301 aa13.1□□□□□ -0.31
PDLIM3-203ENST00000284771 TCL1BO95988 128 aa13.1□□□□□ -0.31
PDLIM3-203ENST00000284771 PKHD1L1Q86WI1 4243 aa13.1□□□□□ -0.31
PDLIM3-203ENST00000284771 LST1O00453 97 aa13.08□□□□□ -0.32
PDLIM3-203ENST00000284771 Q6ZQY7 126 aa13.07□□□□□ -0.32
PDLIM3-203ENST00000284771 ABCA13Q86UQ4 5058 aa13.07□□□□□ -0.32
PDLIM3-203ENST00000284771 KRTAP1-4P0C5Y4 121 aa13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 LINC01547P58512 204 aaPredicted RBP13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 SPRR4Q96PI1 79 aa13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 ANAPC11Q9NYG5 84 aa13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 A0A1B0GX51 115 aa13.05□□□□□ -0.32
PDLIM3-203ENST00000284771 FABP2P12104 132 aa13.04□□□□□ -0.32
PDLIM3-203ENST00000284771 LRP1Q07954 4544 aaKnown RBP13.04□□□□□ -0.32
PDLIM3-203ENST00000284771 GAGE2AQ6NT46 116 aa13.03□□□□□ -0.32
PDLIM3-203ENST00000284771 LYRM7Q5U5X0 104 aa13.02□□□□□ -0.32
PDLIM3-203ENST00000284771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.02□□□□□ -0.32
PDLIM3-203ENST00000284771 DEFB105AQ8NG35 78 aa13.02□□□□□ -0.32
PDLIM3-203ENST00000284771 TRACP01848 142 aa13.02□□□□□ -0.33
PDLIM3-203ENST00000284771 IGLV5-48A0A075B6I7 105 aa13.01□□□□□ -0.33
PDLIM3-203ENST00000284771 TRBV20-1A0A075B6N2 111 aa13.01□□□□□ -0.33
PDLIM3-203ENST00000284771 ATXN8Q156A1 80 aa13□□□□□ -0.33
PDLIM3-203ENST00000284771 Q8N377 158 aa13□□□□□ -0.33
PDLIM3-203ENST00000284771 SNCGO76070 127 aa12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 LINC00483Q53H64 154 aa12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 MYCBP2O75592 4640 aa12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 ZNF706Q9Y5V0 76 aaPredicted RBP12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 SPCS1Q9Y6A9 102 aa12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 SPRR1BP22528 89 aa12.97□□□□□ -0.33
PDLIM3-203ENST00000284771 H3BMG7 143 aa12.96□□□□□ -0.33
PDLIM3-203ENST00000284771 DNAL4O96015 105 aa12.96□□□□□ -0.33
PDLIM3-203ENST00000284771 A0A087X002 238 aa12.96□□□□□ -0.34
PDLIM3-203ENST00000284771 TEX49A0A1B0GTD5 131 aa12.96□□□□□ -0.34
PDLIM3-203ENST00000284771 SMIM29Q86T20 159 aa12.95□□□□□ -0.34
PDLIM3-203ENST00000284771 C3orf22Q8N5N4 141 aa12.95□□□□□ -0.34
PDLIM3-203ENST00000284771 FAT3Q8TDW7 4589 aa12.94□□□□□ -0.34
PDLIM3-203ENST00000284771 OCIAD2Q56VL3 154 aa12.93□□□□□ -0.34
PDLIM3-203ENST00000284771 ORMDL1Q9P0S3 153 aa12.93□□□□□ -0.34
PDLIM3-203ENST00000284771 K7EP34 96 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 297.5 ms