RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 LINC00313P59037 77 aa10.93□□□□□ -0.66
SH3RF1-201ENST00000284637 A8MWP4 228 aa10.92□□□□□ -0.66
SH3RF1-201ENST00000284637 KCNQ1DNQ9H478 68 aa10.91□□□□□ -0.66
SH3RF1-201ENST00000284637 CYSTM1Q9H1C7 97 aa10.91□□□□□ -0.66
SH3RF1-201ENST00000284637 IGLV1-50A0A075B6I6 118 aa10.91□□□□□ -0.66
SH3RF1-201ENST00000284637 ZNF575Q86XF7 245 aa10.89□□□□□ -0.67
SH3RF1-201ENST00000284637 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
SH3RF1-201ENST00000284637 RTL8CO15255 209 aa10.88□□□□□ -0.67
SH3RF1-201ENST00000284637 DNAH10OSP0CZ25 163 aa10.88□□□□□ -0.67
SH3RF1-201ENST00000284637 FP248Q71RG6 208 aaPredicted RBP10.88□□□□□ -0.67
SH3RF1-201ENST00000284637 A0A0G2JQZ4 141 aa10.88□□□□□ -0.67
SH3RF1-201ENST00000284637 A0A1W2PNN7 141 aa10.88□□□□□ -0.67
SH3RF1-201ENST00000284637 KRTAP24-1Q3LI83 254 aa10.88□□□□□ -0.67
SH3RF1-201ENST00000284637 ATRQ13535 2644 aa10.87□□□□□ -0.67
SH3RF1-201ENST00000284637 UQCR11O14957 56 aa10.87□□□□□ -0.67
SH3RF1-201ENST00000284637 GIG44P09565 113 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-201ENST00000284637 IGFL1Q6UW32 110 aa10.87□□□□□ -0.67
SH3RF1-201ENST00000284637 HECTD1Q9ULT8 2610 aa10.87□□□□□ -0.67
SH3RF1-201ENST00000284637 CDC42SE1Q9NRR8 79 aa10.86□□□□□ -0.67
SH3RF1-201ENST00000284637 Q8N377 158 aa10.86□□□□□ -0.67
SH3RF1-201ENST00000284637 SPANXA2-OT1Q8N9U9 137 aa10.85□□□□□ -0.67
SH3RF1-201ENST00000284637 OCR1Q9BZK8 76 aa10.85□□□□□ -0.67
SH3RF1-201ENST00000284637 PRR34Q9NV39 138 aa10.85□□□□□ -0.67
SH3RF1-201ENST00000284637 MRPL34Q9BQ48 92 aaKnown RBP10.84□□□□□ -0.67
SH3RF1-201ENST00000284637 RBM12B-AS1Q9P1G2 102 aa10.84□□□□□ -0.67
SH3RF1-201ENST00000284637 C15orf56Q8N910 161 aa10.83□□□□□ -0.68
SH3RF1-201ENST00000284637 TYMSOSQ8TAI1 123 aa10.8□□□□□ -0.68
SH3RF1-201ENST00000284637 Q96NJ1 140 aa10.79□□□□□ -0.68
SH3RF1-201ENST00000284637 C19orf73Q9NVV2 129 aa10.79□□□□□ -0.68
SH3RF1-201ENST00000284637 OXTP01178 125 aa10.78□□□□□ -0.68
SH3RF1-201ENST00000284637 FAM229AH3BQW9 127 aa10.78□□□□□ -0.68
SH3RF1-201ENST00000284637 MIR22HGQ0VDD5 57 aa10.77□□□□□ -0.68
SH3RF1-201ENST00000284637 MAST4O15021 2626 aa10.76□□□□□ -0.69
SH3RF1-201ENST00000284637 C5orf42Q9H799 3197 aa10.76□□□□□ -0.69
SH3RF1-201ENST00000284637 C8orf17Q9NRJ1 99 aa10.75□□□□□ -0.69
SH3RF1-201ENST00000284637 SPINT4Q6UDR6 99 aa10.75□□□□□ -0.69
SH3RF1-201ENST00000284637 A0A0C4DFX4 3053 aa10.73□□□□□ -0.69
SH3RF1-201ENST00000284637 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
SH3RF1-201ENST00000284637 LINC00612Q8N6U2 182 aa10.72□□□□□ -0.69
SH3RF1-201ENST00000284637 CENPEQ02224 2701 aa10.72□□□□□ -0.69
SH3RF1-201ENST00000284637 DSCR10P59022 87 aa10.71□□□□□ -0.69
SH3RF1-201ENST00000284637 A0A096LNT2 108 aa10.71□□□□□ -0.69
SH3RF1-201ENST00000284637 A0A1W2PNM2 257 aa10.71□□□□□ -0.7
SH3RF1-201ENST00000284637 KRTAP10-11P60412 298 aa10.69□□□□□ -0.7
SH3RF1-201ENST00000284637 CHD7Q9P2D1 2997 aa10.68□□□□□ -0.7
SH3RF1-201ENST00000284637 A0A1B0GVX0 72 aa10.68□□□□□ -0.7
SH3RF1-201ENST00000284637 FLNAP21333 2647 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-201ENST00000284637 CFAP54Q96N23 3096 aa10.67□□□□□ -0.7
SH3RF1-201ENST00000284637 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
SH3RF1-201ENST00000284637 PLA2G1BP04054 148 aaKnown RBP10.66□□□□□ -0.7
SH3RF1-201ENST00000284637 AKAP13Q12802 2813 aa10.66□□□□□ -0.7
SH3RF1-201ENST00000284637 SSBP3-AS1Q7Z2R9 100 aa10.66□□□□□ -0.7
SH3RF1-201ENST00000284637 ANAPC11Q9NYG5 84 aa10.66□□□□□ -0.7
SH3RF1-201ENST00000284637 KRTAP10-3P60369 221 aa10.66□□□□□ -0.7
SH3RF1-201ENST00000284637 IGLV5-48A0A075B6I7 105 aa10.66□□□□□ -0.7
SH3RF1-201ENST00000284637 Q75L30 129 aa10.66□□□□□ -0.7
SH3RF1-201ENST00000284637 CASC10Q5T4H9 136 aa10.64□□□□□ -0.71
SH3RF1-201ENST00000284637 TLX1NBP0CAT3 122 aa10.63□□□□□ -0.71
SH3RF1-201ENST00000284637 H3BS24 57 aa10.62□□□□□ -0.71
SH3RF1-201ENST00000284637 PLA2G2DQ9UNK4 145 aa10.62□□□□□ -0.71
SH3RF1-201ENST00000284637 Q8N9P0 234 aaPredicted RBP10.61□□□□□ -0.71
SH3RF1-201ENST00000284637 ZNF861PO60384 105 aa10.61□□□□□ -0.71
SH3RF1-201ENST00000284637 K7EIL1 84 aa10.6□□□□□ -0.71
SH3RF1-201ENST00000284637 LINC01554Q52M75 96 aa10.6□□□□□ -0.71
SH3RF1-201ENST00000284637 ITPR3Q14573 2671 aa10.59□□□□□ -0.71
SH3RF1-201ENST00000284637 CR1P17927 2039 aa10.58□□□□□ -0.72
SH3RF1-201ENST00000284637 C9orf163Q8N9P6 203 aa10.58□□□□□ -0.72
SH3RF1-201ENST00000284637 Q5VV11 94 aa10.55□□□□□ -0.72
SH3RF1-201ENST00000284637 IGLV7-46A0A075B6I9 117 aa10.54□□□□□ -0.72
SH3RF1-201ENST00000284637 SPRR4Q96PI1 79 aa10.51□□□□□ -0.73
SH3RF1-201ENST00000284637 CHD6Q8TD26 2715 aa10.51□□□□□ -0.73
SH3RF1-201ENST00000284637 A0A087WTM6 91 aa10.51□□□□□ -0.73
SH3RF1-201ENST00000284637 LINC01558Q9Y6Z2 57 aa10.51□□□□□ -0.73
SH3RF1-201ENST00000284637 C9orf92A6NGG3 77 aa10.5□□□□□ -0.73
SH3RF1-201ENST00000284637 PRR26Q8N8Z3 221 aa10.5□□□□□ -0.73
SH3RF1-201ENST00000284637 RANBP2P49792 3224 aaKnown RBP10.5□□□□□ -0.73
SH3RF1-201ENST00000284637 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
SH3RF1-201ENST00000284637 PSORS1C2Q9UIG4 136 aa10.5□□□□□ -0.73
SH3RF1-201ENST00000284637 LAMA2P24043 3122 aaKnown RBP10.47□□□□□ -0.73
SH3RF1-201ENST00000284637 LINC00304Q8N9R0 145 aa10.47□□□□□ -0.73
SH3RF1-201ENST00000284637 WWC2-AS2Q96NR7 200 aa10.44□□□□□ -0.74
SH3RF1-201ENST00000284637 CFAP46Q8IYW2 2715 aa10.44□□□□□ -0.74
SH3RF1-201ENST00000284637 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
SH3RF1-201ENST00000284637 IGLV7-43P04211 117 aa10.44□□□□□ -0.74
SH3RF1-201ENST00000284637 PRAC1Q96KF2 57 aa10.44□□□□□ -0.74
SH3RF1-201ENST00000284637 Q8N1X5 172 aa10.43□□□□□ -0.74
SH3RF1-201ENST00000284637 CRIPTQ9P021 101 aa10.43□□□□□ -0.74
SH3RF1-201ENST00000284637 KRTAP1-3Q8IUG1 177 aa10.42□□□□□ -0.74
SH3RF1-201ENST00000284637 IGLV5-37A0A075B6J1 123 aa10.42□□□□□ -0.74
SH3RF1-201ENST00000284637 CHD9Q3L8U1 2897 aa10.41□□□□□ -0.74
SH3RF1-201ENST00000284637 HELZ2Q9BYK8 2649 aaKnown RBP10.4□□□□□ -0.74
SH3RF1-201ENST00000284637 SMR3BP02814 79 aaPredicted RBP10.39□□□□□ -0.75
SH3RF1-201ENST00000284637 MGAQ8IWI9 3026 aa10.38□□□□□ -0.75
SH3RF1-201ENST00000284637 Q8NDZ9 215 aa10.38□□□□□ -0.75
SH3RF1-201ENST00000284637 KRTAP1-1Q07627 177 aa10.36□□□□□ -0.75
SH3RF1-201ENST00000284637 STAB1Q9NY15 2570 aa10.34□□□□□ -0.75
SH3RF1-201ENST00000284637 A0A0D9SG42 100 aa10.34□□□□□ -0.75
SH3RF1-201ENST00000284637 HTTP42858 3142 aa10.33□□□□□ -0.76
SH3RF1-201ENST00000284637 LAMA3Q16787 3333 aa10.33□□□□□ -0.76
SH3RF1-201ENST00000284637 MAP1AP78559 2803 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms