RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 CDC42SE1Q9NRR8 79 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 CUBNO60494 3623 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 A8MWP4 228 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 M0R2N4 97 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 Q6ZRP5 223 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 SMCPP49901 116 aaPredicted RBP2.56□□□□□ -2
RAB3C-201ENST00000282878 KRTAP23-1A1A580 65 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 C1orf134Q5TEV5 83 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 ANKHD1Q8IWZ3 2542 aaKnown RBP2.56□□□□□ -2
RAB3C-201ENST00000282878 CFAP46Q8IYW2 2715 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 SLPIP03973 132 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 KLK9Q2XQG4 91 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 CNFNQ9BYD5 112 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 LELP1Q5T871 98 aa2.56□□□□□ -2
RAB3C-201ENST00000282878 TRBV6-8A0A0A6YYG3 113 aa2.55□□□□□ -2
RAB3C-201ENST00000282878 Q8N2B8 174 aa2.55□□□□□ -2
RAB3C-201ENST00000282878 ZFHX3Q15911 3703 aa2.55□□□□□ -2
RAB3C-201ENST00000282878 C2CD3Q4AC94 2353 aa2.55□□□□□ -2
RAB3C-201ENST00000282878 KPRPQ5T749 579 aaPredicted RBP2.55□□□□□ -2
RAB3C-201ENST00000282878 ENHOQ6UWT2 76 aa2.55□□□□□ -2
RAB3C-201ENST00000282878 IGLV1-51P01701 117 aa2.55□□□□□ -2
RAB3C-201ENST00000282878 KLKP1Q107X0 134 aa2.55□□□□□ -2
RAB3C-201ENST00000282878 TRBV6-4A0A1B0GX49 114 aa2.54□□□□□ -2
RAB3C-201ENST00000282878 Q8N814 137 aa2.54□□□□□ -2
RAB3C-201ENST00000282878 KRTAP10-11P60412 298 aa2.54□□□□□ -2
RAB3C-201ENST00000282878 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.54□□□□□ -2
RAB3C-201ENST00000282878 DOPEY1Q5JWR5 2465 aa2.54□□□□□ -2
RAB3C-201ENST00000282878 A8MTW9 85 aa2.53□□□□□ -2
RAB3C-201ENST00000282878 NAV2Q8IVL1 2488 aa2.53□□□□□ -2
RAB3C-201ENST00000282878 HRNRQ86YZ3 2850 aaPredicted RBP2.53□□□□□ -2
RAB3C-201ENST00000282878 IGKV2-28A0A075B6P5 120 aa2.53□□□□□ -2
RAB3C-201ENST00000282878 IGKV2D-28P01615 120 aa2.53□□□□□ -2
RAB3C-201ENST00000282878 DMAC1Q96GE9 116 aa2.53□□□□□ -2
RAB3C-201ENST00000282878 TRBV30A0A0K0K1B3 111 aa2.53□□□□□ -2
RAB3C-201ENST00000282878 LYPD5Q6UWN5 251 aa2.53□□□□□ -2
RAB3C-201ENST00000282878 AMELXQ99217 191 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 WFDC13Q8IUB5 93 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 TRBV6-5A0A0K0K1A5 114 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 DEFB116Q30KQ4 102 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 SMIM29Q86T20 159 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 TRAV22A0A0B4J277 110 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 NDUFAF8A1L188 74 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 Q6ZTC4 211 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 CASC10Q5T4H9 136 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 HECTD1Q9ULT8 2610 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 CELSR1Q9NYQ6 3014 aa2.52□□□□□ -2.01
RAB3C-201ENST00000282878 EPG5Q9HCE0 2579 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 LITAFQ99732 161 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 CDC42SE2Q9NRR3 84 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 PTPN13Q12923 2485 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 FAM208BQ5VWN6 2430 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 USP24Q9UPU5 2620 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 C9orf129Q5T035 196 aaKnown RBP2.51□□□□□ -2.01
RAB3C-201ENST00000282878 LINC00308Q8TCZ7 52 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 LINC01556Q5JQF7 62 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 C16orf95Q9H693 158 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 LINC00959A0A1B0GUT2 108 aa2.51□□□□□ -2.01
RAB3C-201ENST00000282878 NOTCH2Q04721 2471 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 LINC01546A6NGU7 62 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 H7BZZ5 65 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 C1orf137Q5JT78 98 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 Q8NDZ9 215 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 H0Y9P7 68 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 Q8IZM0 81 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 PRO0461Q9UI25 63 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 UNQ6190/PRO20217Q6UXQ8 127 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 Q6ZQY7 126 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 UQCR11O14957 56 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 ACYP2P14621 99 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 USP9XQ93008 2570 aaPredicted RBP2.5□□□□□ -2.01
RAB3C-201ENST00000282878 MIR22HGQ0VDD5 57 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 SMIM11BQ8TCY0 68 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 LINC00208Q96KT6 92 aa2.5□□□□□ -2.01
RAB3C-201ENST00000282878 USP9YO00507 2555 aaPredicted RBP2.5□□□□□ -2.01
RAB3C-201ENST00000282878 A0A087X002 238 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 FP248Q71RG6 208 aaPredicted RBP2.49□□□□□ -2.01
RAB3C-201ENST00000282878 IGSF10Q6WRI0 2623 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 A0A087WVE0 104 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 LINC00476Q8WZB0 136 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 C1orf64Q8NEQ6 169 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 PRLHP81277 87 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 Q9BRP9 147 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 A0A087WYN8 130 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 A0A0G2JQZ4 141 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 A0A1W2PNN7 141 aa2.49□□□□□ -2.01
RAB3C-201ENST00000282878 A0A1B0GU69 56 aa2.48□□□□□ -2.01
RAB3C-201ENST00000282878 LOC101927531A0A1B0GV80 90 aa2.48□□□□□ -2.01
RAB3C-201ENST00000282878 EGFEM1PQ0D2K5 195 aa2.48□□□□□ -2.01
RAB3C-201ENST00000282878 TP53AIP1Q9HCN2 124 aa2.48□□□□□ -2.01
RAB3C-201ENST00000282878 JMJD1CQ15652 2540 aa2.48□□□□□ -2.01
RAB3C-201ENST00000282878 SPINK1P00995 79 aa2.48□□□□□ -2.01
RAB3C-201ENST00000282878 FAM229BQ4G0N7 80 aa2.48□□□□□ -2.01
RAB3C-201ENST00000282878 CRYBG3Q68DQ2 2970 aa2.48□□□□□ -2.01
RAB3C-201ENST00000282878 VPS13CQ709C8 3753 aa2.47□□□□□ -2.01
RAB3C-201ENST00000282878 MAP1AP78559 2803 aaPredicted RBP2.47□□□□□ -2.01
RAB3C-201ENST00000282878 LINC00575Q6W349 94 aa2.47□□□□□ -2.01
RAB3C-201ENST00000282878 CCDC168Q8NDH2 2452 aa2.47□□□□□ -2.01
RAB3C-201ENST00000282878 TLX1NBP0CAT3 122 aa2.46□□□□□ -2.02
RAB3C-201ENST00000282878 IGKV2D-30A0A075B6S6 120 aa2.46□□□□□ -2.02
RAB3C-201ENST00000282878 IGKV2-30P06310 120 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms