RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
A1CF-201ENST00000282641 IGLV1-50A0A075B6I6 118 aa5.69□□□□□ -1.5
A1CF-201ENST00000282641 DSCR10P59022 87 aa5.69□□□□□ -1.5
A1CF-201ENST00000282641 DEFB136Q30KP8 78 aa5.69□□□□□ -1.5
A1CF-201ENST00000282641 DEFB135Q30KP9 77 aa5.68□□□□□ -1.5
A1CF-201ENST00000282641 ANAPC11Q9NYG5 84 aa5.68□□□□□ -1.5
A1CF-201ENST00000282641 COX6B2Q6YFQ2 88 aa5.68□□□□□ -1.5
A1CF-201ENST00000282641 PRR3P79522 188 aaKnown RBP5.67□□□□□ -1.5
A1CF-201ENST00000282641 A0A1W2PNU3 283 aaPredicted RBP5.67□□□□□ -1.5
A1CF-201ENST00000282641 A0A096LNT2 108 aa5.67□□□□□ -1.5
A1CF-201ENST00000282641 IGKV2-24A0A0C4DH68 120 aa5.67□□□□□ -1.5
A1CF-201ENST00000282641 C9orf163Q8N9P6 203 aa5.67□□□□□ -1.5
A1CF-201ENST00000282641 SPRR1AP35321 89 aa5.67□□□□□ -1.5
A1CF-201ENST00000282641 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
A1CF-201ENST00000282641 FLNAP21333 2647 aaKnown RBP5.66□□□□□ -1.5
A1CF-201ENST00000282641 C11orf45Q8TAV5 145 aa5.66□□□□□ -1.5
A1CF-201ENST00000282641 LY6G6CO95867 125 aa5.66□□□□□ -1.5
A1CF-201ENST00000282641 DNAH10OSP0CZ25 163 aa5.66□□□□□ -1.5
A1CF-201ENST00000282641 CRIPTQ9P021 101 aa5.66□□□□□ -1.5
A1CF-201ENST00000282641 IGFL1Q6UW32 110 aa5.65□□□□□ -1.51
A1CF-201ENST00000282641 PCOTHQ58A44 107 aa5.65□□□□□ -1.51
A1CF-201ENST00000282641 A0A1W2PNM2 257 aa5.64□□□□□ -1.51
A1CF-201ENST00000282641 PRB2P02812 416 aaPredicted RBP5.64□□□□□ -1.51
A1CF-201ENST00000282641 Q8N377 158 aa5.64□□□□□ -1.51
A1CF-201ENST00000282641 NBEAL1Q6ZS30 2694 aa5.63□□□□□ -1.51
A1CF-201ENST00000282641 PRB1P04280 392 aa5.63□□□□□ -1.51
A1CF-201ENST00000282641 FAM229BQ4G0N7 80 aa5.62□□□□□ -1.51
A1CF-201ENST00000282641 CSNK1G2-AS1Q8NCQ2 148 aa5.62□□□□□ -1.51
A1CF-201ENST00000282641 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
A1CF-201ENST00000282641 NOTCH1P46531 2555 aa5.61□□□□□ -1.51
A1CF-201ENST00000282641 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
A1CF-201ENST00000282641 KMT2BQ9UMN6 2715 aaPredicted RBP5.6□□□□□ -1.51
A1CF-201ENST00000282641 SSBP3-AS1Q7Z2R9 100 aa5.6□□□□□ -1.51
A1CF-201ENST00000282641 A0A096LPF7 62 aa5.6□□□□□ -1.51
A1CF-201ENST00000282641 C9orf129Q5T035 196 aaKnown RBP5.59□□□□□ -1.51
A1CF-201ENST00000282641 KRTAP29-1A8MX34 341 aaPredicted RBP5.58□□□□□ -1.52
A1CF-201ENST00000282641 C1orf134Q5TEV5 83 aa5.58□□□□□ -1.52
A1CF-201ENST00000282641 ST20-AS1Q8NBB2 130 aa5.58□□□□□ -1.52
A1CF-201ENST00000282641 M0R2N4 97 aa5.57□□□□□ -1.52
A1CF-201ENST00000282641 PRO3102Q9H379 93 aa5.57□□□□□ -1.52
A1CF-201ENST00000282641 PRR26Q8N8Z3 221 aa5.57□□□□□ -1.52
A1CF-201ENST00000282641 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
A1CF-201ENST00000282641 NUPR2A6NF83 97 aa5.56□□□□□ -1.52
A1CF-201ENST00000282641 LINC00472Q9H8W2 130 aa5.55□□□□□ -1.52
A1CF-201ENST00000282641 MMP24-AS1A0A0U1RRL7 71 aa5.55□□□□□ -1.52
A1CF-201ENST00000282641 ATRQ13535 2644 aa5.55□□□□□ -1.52
A1CF-201ENST00000282641 ROMO1P60602 79 aa5.55□□□□□ -1.52
A1CF-201ENST00000282641 IGLV7-43P04211 117 aa5.54□□□□□ -1.52
A1CF-201ENST00000282641 HRES1P13985 223 aa5.54□□□□□ -1.52
A1CF-201ENST00000282641 MAST4O15021 2626 aa5.53□□□□□ -1.52
A1CF-201ENST00000282641 MGAM2Q2M2H8 2515 aa5.52□□□□□ -1.53
A1CF-201ENST00000282641 C19orf73Q9NVV2 129 aa5.51□□□□□ -1.53
A1CF-201ENST00000282641 USP24Q9UPU5 2620 aa5.51□□□□□ -1.53
A1CF-201ENST00000282641 KRTAP16-1A8MUX0 517 aa5.51□□□□□ -1.53
A1CF-201ENST00000282641 PLAC8Q9NZF1 115 aa5.51□□□□□ -1.53
A1CF-201ENST00000282641 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
A1CF-201ENST00000282641 ITPR3Q14573 2671 aa5.49□□□□□ -1.53
A1CF-201ENST00000282641 COL6A5A8TX70 2615 aa5.49□□□□□ -1.53
A1CF-201ENST00000282641 FLG2Q5D862 2391 aaPredicted RBP5.48□□□□□ -1.53
A1CF-201ENST00000282641 ZNF292O60281 2723 aa5.47□□□□□ -1.53
A1CF-201ENST00000282641 A0A1B0GU33 70 aa5.46□□□□□ -1.53
A1CF-201ENST00000282641 PRLHP81277 87 aa5.46□□□□□ -1.54
A1CF-201ENST00000282641 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
A1CF-201ENST00000282641 KRTAP4-16G5E9R7 235 aaPredicted RBP5.44□□□□□ -1.54
A1CF-201ENST00000282641 SPINK7P58062 85 aa5.44□□□□□ -1.54
A1CF-201ENST00000282641 RTL8CO15255 209 aa5.44□□□□□ -1.54
A1CF-201ENST00000282641 CSAG1Q6PB30 78 aa5.44□□□□□ -1.54
A1CF-201ENST00000282641 IGLV9-49A0A0B4J1Y8 123 aa5.43□□□□□ -1.54
A1CF-201ENST00000282641 CHD6Q8TD26 2715 aa5.43□□□□□ -1.54
A1CF-201ENST00000282641 GIG44P09565 113 aaPredicted RBP5.43□□□□□ -1.54
A1CF-201ENST00000282641 NSD1Q96L73 2696 aaPredicted RBP5.42□□□□□ -1.54
A1CF-201ENST00000282641 LINC00483Q53H64 154 aa5.41□□□□□ -1.54
A1CF-201ENST00000282641 BAHCC1Q9P281 2608 aa5.41□□□□□ -1.54
A1CF-201ENST00000282641 IGKV2D-30A0A075B6S6 120 aa5.41□□□□□ -1.54
A1CF-201ENST00000282641 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
A1CF-201ENST00000282641 C10orf99Q6UWK7 81 aa5.41□□□□□ -1.54
A1CF-201ENST00000282641 SPINK6Q6UWN8 80 aa5.4□□□□□ -1.55
A1CF-201ENST00000282641 MAP1AP78559 2803 aaPredicted RBP5.4□□□□□ -1.55
A1CF-201ENST00000282641 AKAP13Q12802 2813 aa5.38□□□□□ -1.55
A1CF-201ENST00000282641 SETXQ7Z333 2677 aaKnown RBP5.38□□□□□ -1.55
A1CF-201ENST00000282641 STAB2Q8WWQ8 2551 aa5.37□□□□□ -1.55
A1CF-201ENST00000282641 ZNF861PO60384 105 aa5.37□□□□□ -1.55
A1CF-201ENST00000282641 TEP1Q99973 2627 aaKnown RBP5.37□□□□□ -1.55
A1CF-201ENST00000282641 C18orf65Q6ZTR6 163 aa5.36□□□□□ -1.55
A1CF-201ENST00000282641 NIPBLQ6KC79 2804 aaeCLIP5.36□□□□□ -1.55
A1CF-201ENST00000282641 ITPR1Q14643 2758 aa5.35□□□□□ -1.55
A1CF-201ENST00000282641 PRAC1Q96KF2 57 aa5.35□□□□□ -1.55
A1CF-201ENST00000282641 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
A1CF-201ENST00000282641 CFAP46Q8IYW2 2715 aa5.35□□□□□ -1.55
A1CF-201ENST00000282641 DEFB116Q30KQ4 102 aa5.34□□□□□ -1.55
A1CF-201ENST00000282641 SPINK1P00995 79 aa5.34□□□□□ -1.55
A1CF-201ENST00000282641 STAB1Q9NY15 2570 aa5.33□□□□□ -1.56
A1CF-201ENST00000282641 DEFB4AO15263 64 aa5.33□□□□□ -1.56
A1CF-201ENST00000282641 DMBT1Q9UGM3 2413 aaPredicted RBP5.32□□□□□ -1.56
A1CF-201ENST00000282641 RPL37P61927 97 aaKnown RBP5.32□□□□□ -1.56
A1CF-201ENST00000282641 A0A096LNI7 61 aa5.31□□□□□ -1.56
A1CF-201ENST00000282641 Q5W150 140 aa5.3□□□□□ -1.56
A1CF-201ENST00000282641 CIRBP-AS1Q8TBR5 109 aa5.3□□□□□ -1.56
A1CF-201ENST00000282641 UTP20O75691 2785 aaKnown RBP5.29□□□□□ -1.56
A1CF-201ENST00000282641 IGLV5-52A0A0A0MRZ9 124 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms