RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 LINC00336Q6ZUF6 198 aa13.25□□□□□ -0.29
CACNA1B-201ENST00000277549 KCNQ1DNQ9H478 68 aa13.23□□□□□ -0.29
CACNA1B-201ENST00000277549 A0A1B0GW54 56 aa13.23□□□□□ -0.29
CACNA1B-201ENST00000277549 ZNF462Q96JM2 2506 aa13.21□□□□□ -0.29
CACNA1B-201ENST00000277549 ABCA12Q86UK0 2595 aa13.21□□□□□ -0.29
CACNA1B-201ENST00000277549 C10orf142B7Z368 130 aa13.21□□□□□ -0.29
CACNA1B-201ENST00000277549 CDC42SE1Q9NRR8 79 aa13.21□□□□□ -0.29
CACNA1B-201ENST00000277549 Q8N377 158 aa13.2□□□□□ -0.3
CACNA1B-201ENST00000277549 PLA2G2DQ9UNK4 145 aa13.2□□□□□ -0.3
CACNA1B-201ENST00000277549 C19orf73Q9NVV2 129 aa13.2□□□□□ -0.3
CACNA1B-201ENST00000277549 IGLV7-46A0A075B6I9 117 aa13.2□□□□□ -0.3
CACNA1B-201ENST00000277549 TNP2Q05952 138 aa13.19□□□□□ -0.3
CACNA1B-201ENST00000277549 PRR26Q8N8Z3 221 aa13.19□□□□□ -0.3
CACNA1B-201ENST00000277549 ERC2-IT1O76042 136 aa13.17□□□□□ -0.3
CACNA1B-201ENST00000277549 LINC00612Q8N6U2 182 aa13.14□□□□□ -0.31
CACNA1B-201ENST00000277549 LITAFQ99732 161 aa13.13□□□□□ -0.31
CACNA1B-201ENST00000277549 FAM104AQ969W3 186 aa13.13□□□□□ -0.31
CACNA1B-201ENST00000277549 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
CACNA1B-201ENST00000277549 TLN2Q9Y4G6 2542 aa13.12□□□□□ -0.31
CACNA1B-201ENST00000277549 EIF4EBP3O60516 100 aaPredicted RBP13.11□□□□□ -0.31
CACNA1B-201ENST00000277549 SPRR4Q96PI1 79 aa13.11□□□□□ -0.31
CACNA1B-201ENST00000277549 C9orf163Q8N9P6 203 aa13.1□□□□□ -0.31
CACNA1B-201ENST00000277549 PRO0461Q9UI25 63 aa13.1□□□□□ -0.31
CACNA1B-201ENST00000277549 LUZP6Q538Z0 58 aa13.07□□□□□ -0.32
CACNA1B-201ENST00000277549 WDR87Q6ZQQ6 2873 aa13.06□□□□□ -0.32
CACNA1B-201ENST00000277549 LINC00483Q53H64 154 aa13.02□□□□□ -0.33
CACNA1B-201ENST00000277549 F8P00451 2351 aa13.01□□□□□ -0.33
CACNA1B-201ENST00000277549 GIG44P09565 113 aaPredicted RBP12.99□□□□□ -0.33
CACNA1B-201ENST00000277549 PRR34Q9NV39 138 aa12.98□□□□□ -0.33
CACNA1B-201ENST00000277549 CYP4F30PQ9H0H9 118 aa12.97□□□□□ -0.33
CACNA1B-201ENST00000277549 TLX1NBP0CAT3 122 aa12.97□□□□□ -0.33
CACNA1B-201ENST00000277549 EP400Q96L91 3159 aa12.96□□□□□ -0.33
CACNA1B-201ENST00000277549 WIPF1O43516 503 aa12.95□□□□□ -0.34
CACNA1B-201ENST00000277549 Q5VSD8 79 aa12.94□□□□□ -0.34
CACNA1B-201ENST00000277549 CD164Q04900 197 aa12.93□□□□□ -0.34
CACNA1B-201ENST00000277549 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.93□□□□□ -0.34
CACNA1B-201ENST00000277549 PCSK5Q92824 1860 aa12.92□□□□□ -0.34
CACNA1B-201ENST00000277549 S4R3F8 94 aa12.9□□□□□ -0.34
CACNA1B-201ENST00000277549 SETD2Q9BYW2 2564 aaPredicted RBP12.89□□□□□ -0.35
CACNA1B-201ENST00000277549 RPS28P62857 69 aaKnown RBP12.87□□□□□ -0.35
CACNA1B-201ENST00000277549 CHD8Q9HCK8 2581 aa12.86□□□□□ -0.35
CACNA1B-201ENST00000277549 A0A1W2PNM2 257 aa12.86□□□□□ -0.35
CACNA1B-201ENST00000277549 ACANP16112 2415 aa12.86□□□□□ -0.35
CACNA1B-201ENST00000277549 USP9XQ93008 2570 aaPredicted RBP12.83□□□□□ -0.35
CACNA1B-201ENST00000277549 CNBPP62633 177 aaKnown RBP12.83□□□□□ -0.36
CACNA1B-201ENST00000277549 ANKRD17O75179 2603 aaKnown RBP12.81□□□□□ -0.36
CACNA1B-201ENST00000277549 A0A096LNT2 108 aa12.79□□□□□ -0.36
CACNA1B-201ENST00000277549 FASNP49327 2511 aaKnown RBP12.78□□□□□ -0.36
CACNA1B-201ENST00000277549 CENPFP49454 3210 aa12.78□□□□□ -0.36
CACNA1B-201ENST00000277549 ANKRD11Q6UB99 2663 aaPredicted RBP12.77□□□□□ -0.37
CACNA1B-201ENST00000277549 A0A1B0GU33 70 aa12.76□□□□□ -0.37
CACNA1B-201ENST00000277549 POLQO75417 2590 aa12.76□□□□□ -0.37
CACNA1B-201ENST00000277549 Q1T7F1 81 aa12.76□□□□□ -0.37
CACNA1B-201ENST00000277549 PKD1L2Q7Z442 2459 aa12.75□□□□□ -0.37
CACNA1B-201ENST00000277549 SPTBN4Q9H254 2564 aa12.75□□□□□ -0.37
CACNA1B-201ENST00000277549 KRTAP1-3Q8IUG1 177 aa12.73□□□□□ -0.37
CACNA1B-201ENST00000277549 KTN1-AS1Q86SY8 53 aa12.71□□□□□ -0.37
CACNA1B-201ENST00000277549 HRES1P13985 223 aa12.7□□□□□ -0.38
CACNA1B-201ENST00000277549 CSAG1Q6PB30 78 aa12.7□□□□□ -0.38
CACNA1B-201ENST00000277549 LCA10Q71F78 164 aa12.69□□□□□ -0.38
CACNA1B-201ENST00000277549 MTORP42345 2549 aa12.68□□□□□ -0.38
CACNA1B-201ENST00000277549 H7BZZ5 65 aa12.67□□□□□ -0.38
CACNA1B-201ENST00000277549 R4GN34 69 aa12.66□□□□□ -0.38
CACNA1B-201ENST00000277549 KRTAP1-1Q07627 177 aa12.65□□□□□ -0.39
CACNA1B-201ENST00000277549 UTRNP46939 3433 aa12.63□□□□□ -0.39
CACNA1B-201ENST00000277549 KLKP1Q107X0 134 aa12.61□□□□□ -0.39
CACNA1B-201ENST00000277549 ZCCHC13Q8WW36 166 aaKnown RBP12.6□□□□□ -0.39
CACNA1B-201ENST00000277549 Q8N9P0 234 aaPredicted RBP12.59□□□□□ -0.39
CACNA1B-201ENST00000277549 USP9YO00507 2555 aaPredicted RBP12.58□□□□□ -0.4
CACNA1B-201ENST00000277549 KLK9Q2XQG4 91 aa12.53□□□□□ -0.4
CACNA1B-201ENST00000277549 SEC61BP60468 96 aaKnown RBP12.52□□□□□ -0.4
CACNA1B-201ENST00000277549 PLAC4Q8WY50 150 aa12.51□□□□□ -0.41
CACNA1B-201ENST00000277549 SPANXA2-OT1Q8N9U9 137 aa12.5□□□□□ -0.41
CACNA1B-201ENST00000277549 SPINK7P58062 85 aa12.5□□□□□ -0.41
CACNA1B-201ENST00000277549 M0QZ58 72 aa12.49□□□□□ -0.41
CACNA1B-201ENST00000277549 PRAC1Q96KF2 57 aa12.49□□□□□ -0.41
CACNA1B-201ENST00000277549 CR1P17927 2039 aa12.48□□□□□ -0.41
CACNA1B-201ENST00000277549 H1FX-AS1Q4G0G2 97 aa12.45□□□□□ -0.42
CACNA1B-201ENST00000277549 DMAC1Q96GE9 116 aa12.43□□□□□ -0.42
CACNA1B-201ENST00000277549 CEP295Q9C0D2 2601 aa12.43□□□□□ -0.42
CACNA1B-201ENST00000277549 PLAC8Q9NZF1 115 aa12.41□□□□□ -0.42
CACNA1B-201ENST00000277549 KRTAP10-2P60368 255 aa12.41□□□□□ -0.42
CACNA1B-201ENST00000277549 KRTAP10-1P60331 282 aa12.4□□□□□ -0.42
CACNA1B-201ENST00000277549 USP24Q9UPU5 2620 aa12.4□□□□□ -0.43
CACNA1B-201ENST00000277549 Q5W150 140 aa12.38□□□□□ -0.43
CACNA1B-201ENST00000277549 FAM229BQ4G0N7 80 aa12.37□□□□□ -0.43
CACNA1B-201ENST00000277549 ADM2Q7Z4H4 148 aa12.35□□□□□ -0.43
CACNA1B-201ENST00000277549 MMP24-AS1A0A0U1RRL7 71 aa12.33□□□□□ -0.44
CACNA1B-201ENST00000277549 OCR1Q9BZK8 76 aa12.32□□□□□ -0.44
CACNA1B-201ENST00000277549 LCE6AA0A183 80 aa12.29□□□□□ -0.44
CACNA1B-201ENST00000277549 BPTFQ12830 3046 aa12.26□□□□□ -0.45
CACNA1B-201ENST00000277549 A0A0A0MQY5 61 aa12.25□□□□□ -0.45
CACNA1B-201ENST00000277549 SPATA8Q6RVD6 105 aa12.25□□□□□ -0.45
CACNA1B-201ENST00000277549 KRTAP1-5Q9BYS1 174 aa12.24□□□□□ -0.45
CACNA1B-201ENST00000277549 Q8NDZ9 215 aa12.23□□□□□ -0.45
CACNA1B-201ENST00000277549 Q75L30 129 aa12.18□□□□□ -0.46
CACNA1B-201ENST00000277549 MGAM2Q2M2H8 2515 aa12.14□□□□□ -0.47
CACNA1B-201ENST00000277549 C5orf42Q9H799 3197 aa12.14□□□□□ -0.47
CACNA1B-201ENST00000277549 ROMO1P60602 79 aa12.11□□□□□ -0.47
CACNA1B-201ENST00000277549 DNAH12Q6ZR08 3092 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms