RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 KIAA0087Q14695 138 aa9.66□□□□□ -0.86
TMEM47-201ENST00000275954 NDUFB1O75438 58 aa9.66□□□□□ -0.86
TMEM47-201ENST00000275954 C1orf137Q5JT78 98 aa9.65□□□□□ -0.86
TMEM47-201ENST00000275954 Q6ZVQ6 151 aa9.65□□□□□ -0.86
TMEM47-201ENST00000275954 C7orf33Q8WU49 177 aa9.65□□□□□ -0.86
TMEM47-201ENST00000275954 TENM2Q9NT68 2774 aa9.65□□□□□ -0.86
TMEM47-201ENST00000275954 PRLHP81277 87 aa9.65□□□□□ -0.87
TMEM47-201ENST00000275954 HRCT1Q6UXD1 115 aa9.65□□□□□ -0.87
TMEM47-201ENST00000275954 DEFB116Q30KQ4 102 aa9.64□□□□□ -0.87
TMEM47-201ENST00000275954 FAM19A3Q7Z5A8 133 aa9.63□□□□□ -0.87
TMEM47-201ENST00000275954 TRBV7-7A0A0K0K1E9 115 aa9.63□□□□□ -0.87
TMEM47-201ENST00000275954 MP68P56378 58 aa9.63□□□□□ -0.87
TMEM47-201ENST00000275954 PRR4Q16378 134 aa9.62□□□□□ -0.87
TMEM47-201ENST00000275954 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
TMEM47-201ENST00000275954 C22orf24Q9Y442 160 aa9.62□□□□□ -0.87
TMEM47-201ENST00000275954 SMCR5Q8TEV8 140 aa9.62□□□□□ -0.87
TMEM47-201ENST00000275954 LINC00612Q8N6U2 182 aa9.62□□□□□ -0.87
TMEM47-201ENST00000275954 C9orf129Q5T035 196 aaKnown RBP9.61□□□□□ -0.87
TMEM47-201ENST00000275954 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
TMEM47-201ENST00000275954 IGLV9-49A0A0B4J1Y8 123 aa9.61□□□□□ -0.87
TMEM47-201ENST00000275954 LINC00588Q9Y4M8 146 aa9.61□□□□□ -0.87
TMEM47-201ENST00000275954 Q6ZRP5 223 aa9.6□□□□□ -0.87
TMEM47-201ENST00000275954 SRRM2Q9UQ35 2752 aaKnown RBP9.6□□□□□ -0.87
TMEM47-201ENST00000275954 LINC01547P58512 204 aaPredicted RBP9.6□□□□□ -0.87
TMEM47-201ENST00000275954 REG3GQ6UW15 175 aa9.6□□□□□ -0.87
TMEM47-201ENST00000275954 LINC00167Q96N53 147 aa9.6□□□□□ -0.87
TMEM47-201ENST00000275954 NUPR2A6NF83 97 aa9.59□□□□□ -0.87
TMEM47-201ENST00000275954 FAM236DA0A1B0GTK5 79 aa9.59□□□□□ -0.87
TMEM47-201ENST00000275954 FAM236CP0DP71 79 aa9.59□□□□□ -0.87
TMEM47-201ENST00000275954 FAM30AQ9NZY2 134 aa9.58□□□□□ -0.88
TMEM47-201ENST00000275954 SPINK6Q6UWN8 80 aa9.58□□□□□ -0.88
TMEM47-201ENST00000275954 H3BNG1 76 aa9.56□□□□□ -0.88
TMEM47-201ENST00000275954 PRR34Q9NV39 138 aa9.56□□□□□ -0.88
TMEM47-201ENST00000275954 A0A087WSZ3 146 aa9.56□□□□□ -0.88
TMEM47-201ENST00000275954 FAM168BA1KXE4 195 aa9.56□□□□□ -0.88
TMEM47-201ENST00000275954 TMEM258P61165 79 aa9.55□□□□□ -0.88
TMEM47-201ENST00000275954 VPREB1P12018 145 aa9.55□□□□□ -0.88
TMEM47-201ENST00000275954 MPLKIPQ8TAP9 179 aa9.55□□□□□ -0.88
TMEM47-201ENST00000275954 TRRAPQ9Y4A5 3859 aa9.54□□□□□ -0.88
TMEM47-201ENST00000275954 ST20-AS1Q8NBB2 130 aa9.53□□□□□ -0.88
TMEM47-201ENST00000275954 SVIPQ8NHG7 77 aa9.53□□□□□ -0.88
TMEM47-201ENST00000275954 ELOF1P60002 83 aaKnown RBP9.53□□□□□ -0.88
TMEM47-201ENST00000275954 IGLV6-57P01721 117 aa9.52□□□□□ -0.89
TMEM47-201ENST00000275954 SERTAD4-AS1Q5TG53 156 aa9.52□□□□□ -0.89
TMEM47-201ENST00000275954 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
TMEM47-201ENST00000275954 NHLRC4P0CG21 123 aaPredicted RBP9.51□□□□□ -0.89
TMEM47-201ENST00000275954 Q6ZQT0 140 aa9.51□□□□□ -0.89
TMEM47-201ENST00000275954 TRAV7A0A075B6U4 112 aa9.51□□□□□ -0.89
TMEM47-201ENST00000275954 Q9BRP9 147 aa9.51□□□□□ -0.89
TMEM47-201ENST00000275954 PRYO14603 147 aa9.5□□□□□ -0.89
TMEM47-201ENST00000275954 C15orf56Q8N910 161 aa9.5□□□□□ -0.89
TMEM47-201ENST00000275954 IGKV4-1P06312 121 aa9.49□□□□□ -0.89
TMEM47-201ENST00000275954 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
TMEM47-201ENST00000275954 DNAH10OSP0CZ25 163 aa9.48□□□□□ -0.89
TMEM47-201ENST00000275954 C5orf47Q569G3 176 aa9.48□□□□□ -0.89
TMEM47-201ENST00000275954 CASC10Q5T4H9 136 aa9.48□□□□□ -0.89
TMEM47-201ENST00000275954 C1orf134Q5TEV5 83 aa9.48□□□□□ -0.89
TMEM47-201ENST00000275954 F8WDY8 70 aa9.46□□□□□ -0.9
TMEM47-201ENST00000275954 PHF5AQ7RTV0 110 aaKnown RBP9.46□□□□□ -0.9
TMEM47-201ENST00000275954 WWC2-AS2Q96NR7 200 aa9.45□□□□□ -0.9
TMEM47-201ENST00000275954 ZNF469Q96JG9 3925 aaPredicted RBP9.45□□□□□ -0.9
TMEM47-201ENST00000275954 Q6ZRX8 168 aa9.44□□□□□ -0.9
TMEM47-201ENST00000275954 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
TMEM47-201ENST00000275954 C4orf48Q5BLP8 95 aa9.44□□□□□ -0.9
TMEM47-201ENST00000275954 IGLV5-52A0A0A0MRZ9 124 aa9.43□□□□□ -0.9
TMEM47-201ENST00000275954 A0A0G2JQZ4 141 aa9.42□□□□□ -0.9
TMEM47-201ENST00000275954 A0A1W2PNN7 141 aa9.42□□□□□ -0.9
TMEM47-201ENST00000275954 LINC00208Q96KT6 92 aa9.42□□□□□ -0.9
TMEM47-201ENST00000275954 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
TMEM47-201ENST00000275954 TMEM254Q8TBM7 123 aa9.41□□□□□ -0.9
TMEM47-201ENST00000275954 CXCL6P80162 114 aa9.4□□□□□ -0.9
TMEM47-201ENST00000275954 Q8NDZ9 215 aa9.4□□□□□ -0.9
TMEM47-201ENST00000275954 BRK1Q8WUW1 75 aa9.4□□□□□ -0.9
TMEM47-201ENST00000275954 TM2D3Q9BRN9 247 aa9.4□□□□□ -0.91
TMEM47-201ENST00000275954 LOC110117498A0A087WWA1 95 aa9.39□□□□□ -0.91
TMEM47-201ENST00000275954 FLG2Q5D862 2391 aaPredicted RBP9.38□□□□□ -0.91
TMEM47-201ENST00000275954 CIRBP-AS1Q8TBR5 109 aa9.38□□□□□ -0.91
TMEM47-201ENST00000275954 TRBV7-6A0A0J9YX20 115 aa9.38□□□□□ -0.91
TMEM47-201ENST00000275954 NDUFC1O43677 76 aa9.38□□□□□ -0.91
TMEM47-201ENST00000275954 SMIM29Q86T20 159 aa9.38□□□□□ -0.91
TMEM47-201ENST00000275954 LINC00476Q8WZB0 136 aa9.37□□□□□ -0.91
TMEM47-201ENST00000275954 CRYGAP11844 174 aa9.36□□□□□ -0.91
TMEM47-201ENST00000275954 NBDYA0A0U1RRE5 68 aa9.36□□□□□ -0.91
TMEM47-201ENST00000275954 Q8NBF4 154 aa9.35□□□□□ -0.91
TMEM47-201ENST00000275954 KCNQ1DNQ9H478 68 aa9.35□□□□□ -0.91
TMEM47-201ENST00000275954 IGHV6-1A0A0B4J1U7 121 aa9.35□□□□□ -0.91
TMEM47-201ENST00000275954 EPM2AB3EWF7 344 aa9.34□□□□□ -0.91
TMEM47-201ENST00000275954 C16orf90A8MZG2 172 aa9.34□□□□□ -0.91
TMEM47-201ENST00000275954 Q8N377 158 aa9.34□□□□□ -0.91
TMEM47-201ENST00000275954 IGLV1-50A0A075B6I6 118 aa9.33□□□□□ -0.92
TMEM47-201ENST00000275954 CASC2Q6XLA1 102 aa9.33□□□□□ -0.92
TMEM47-201ENST00000275954 ZNF706Q9Y5V0 76 aaPredicted RBP9.33□□□□□ -0.92
TMEM47-201ENST00000275954 RPL37AP61513 92 aaKnown RBP9.31□□□□□ -0.92
TMEM47-201ENST00000275954 ERC2-IT1O76042 136 aa9.31□□□□□ -0.92
TMEM47-201ENST00000275954 CHKB-CPT1BH3BT56 60 aa9.31□□□□□ -0.92
TMEM47-201ENST00000275954 HCG22E2RYF7 251 aa9.31□□□□□ -0.92
TMEM47-201ENST00000275954 A0A0U1RQV1 116 aa9.3□□□□□ -0.92
TMEM47-201ENST00000275954 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
TMEM47-201ENST00000275954 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
TMEM47-201ENST00000275954 TRBV7-4A0A0J9YYF1 115 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms