RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 DNAH10Q8IVF4 4471 aa10.88□□□□□ -0.67
VPS54-201ENST00000272322 Q6ZVQ6 151 aa10.88□□□□□ -0.67
VPS54-201ENST00000272322 C7orf33Q8WU49 177 aa10.88□□□□□ -0.67
VPS54-201ENST00000272322 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.87□□□□□ -0.67
VPS54-201ENST00000272322 LOC107984640A0A0U1RRK4 108 aa10.87□□□□□ -0.67
VPS54-201ENST00000272322 ELOF1P60002 83 aaKnown RBP10.86□□□□□ -0.67
VPS54-201ENST00000272322 C2orf48Q96LS8 159 aa10.86□□□□□ -0.67
VPS54-201ENST00000272322 A0A0G2JQZ4 141 aa10.86□□□□□ -0.67
VPS54-201ENST00000272322 A0A1W2PNN7 141 aa10.86□□□□□ -0.67
VPS54-201ENST00000272322 LINC01547P58512 204 aaPredicted RBP10.85□□□□□ -0.67
VPS54-201ENST00000272322 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
VPS54-201ENST00000272322 K7EIL1 84 aa10.84□□□□□ -0.67
VPS54-201ENST00000272322 H3BNG1 76 aa10.83□□□□□ -0.68
VPS54-201ENST00000272322 C20orf197Q8N268 126 aa10.83□□□□□ -0.68
VPS54-201ENST00000272322 TRAV10A0A0B4J240 114 aa10.82□□□□□ -0.68
VPS54-201ENST00000272322 LINC00528Q8N1L1 170 aa10.81□□□□□ -0.68
VPS54-201ENST00000272322 SERP2Q8N6R1 65 aa10.81□□□□□ -0.68
VPS54-201ENST00000272322 HUWE1Q7Z6Z7 4374 aaKnown RBP10.8□□□□□ -0.68
VPS54-201ENST00000272322 UBE2BP63146 152 aa10.79□□□□□ -0.68
VPS54-201ENST00000272322 SNURFQ9Y675 71 aa10.79□□□□□ -0.68
VPS54-201ENST00000272322 PSCAO43653 123 aa10.78□□□□□ -0.68
VPS54-201ENST00000272322 DNAH10OSP0CZ25 163 aa10.78□□□□□ -0.68
VPS54-201ENST00000272322 ETDCA0A1B0GVM5 59 aa10.78□□□□□ -0.68
VPS54-201ENST00000272322 ERC2-IT1O76042 136 aa10.76□□□□□ -0.69
VPS54-201ENST00000272322 UBE2DNLQ8IWF7 75 aa10.75□□□□□ -0.69
VPS54-201ENST00000272322 FUSP35637 526 aaKnown RBP eCLIP10.75□□□□□ -0.69
VPS54-201ENST00000272322 KRTAP1-5Q9BYS1 174 aa10.75□□□□□ -0.69
VPS54-201ENST00000272322 LOC110117498A0A087WWA1 95 aa10.75□□□□□ -0.69
VPS54-201ENST00000272322 BPY2O14599 106 aa10.75□□□□□ -0.69
VPS54-201ENST00000272322 Q8N377 158 aa10.74□□□□□ -0.69
VPS54-201ENST00000272322 KRTAP7-1Q8IUC3 87 aa10.73□□□□□ -0.69
VPS54-201ENST00000272322 TRBV7-4A0A0J9YYF1 115 aa10.73□□□□□ -0.69
VPS54-201ENST00000272322 CHTF8P0CG12 524 aa10.73□□□□□ -0.69
VPS54-201ENST00000272322 PRLHP81277 87 aa10.73□□□□□ -0.69
VPS54-201ENST00000272322 Q9BRP9 147 aa10.73□□□□□ -0.69
VPS54-201ENST00000272322 NREPQ16612 68 aa10.72□□□□□ -0.69
VPS54-201ENST00000272322 DPH3Q96FX2 82 aa10.72□□□□□ -0.69
VPS54-201ENST00000272322 HIGD2AQ9BW72 106 aa10.71□□□□□ -0.69
VPS54-201ENST00000272322 DEFB116Q30KQ4 102 aa10.71□□□□□ -0.69
VPS54-201ENST00000272322 TGP01266 2768 aa10.71□□□□□ -0.7
VPS54-201ENST00000272322 A0A096LNI7 61 aa10.7□□□□□ -0.7
VPS54-201ENST00000272322 CRYGAP11844 174 aa10.7□□□□□ -0.7
VPS54-201ENST00000272322 TM2D3Q9BRN9 247 aa10.69□□□□□ -0.7
VPS54-201ENST00000272322 KCNQ1DNQ9H478 68 aa10.69□□□□□ -0.7
VPS54-201ENST00000272322 ATP5EP2Q5VTU8 51 aa10.68□□□□□ -0.7
VPS54-201ENST00000272322 MRPL55Q7Z7F7 128 aaKnown RBP10.68□□□□□ -0.7
VPS54-201ENST00000272322 Q6ZRX8 168 aa10.67□□□□□ -0.7
VPS54-201ENST00000272322 RMI2Q96E14 147 aa10.67□□□□□ -0.7
VPS54-201ENST00000272322 IGLV1-50A0A075B6I6 118 aa10.66□□□□□ -0.7
VPS54-201ENST00000272322 PDE6GP18545 87 aa10.66□□□□□ -0.7
VPS54-201ENST00000272322 DNAH9Q9NYC9 4486 aa10.65□□□□□ -0.7
VPS54-201ENST00000272322 MDFIQ99750 246 aa10.65□□□□□ -0.7
VPS54-201ENST00000272322 DNAH7Q8WXX0 4024 aa10.65□□□□□ -0.71
VPS54-201ENST00000272322 C1orf137Q5JT78 98 aa10.64□□□□□ -0.71
VPS54-201ENST00000272322 TRBV7-6A0A0J9YX20 115 aa10.62□□□□□ -0.71
VPS54-201ENST00000272322 DNAH3Q8TD57 4116 aa10.61□□□□□ -0.71
VPS54-201ENST00000272322 A0A1W2PNM2 257 aa10.6□□□□□ -0.71
VPS54-201ENST00000272322 PHF5AQ7RTV0 110 aaKnown RBP10.6□□□□□ -0.71
VPS54-201ENST00000272322 REG3GQ6UW15 175 aa10.59□□□□□ -0.71
VPS54-201ENST00000272322 DHRS4-AS1Q9P1J3 65 aa10.58□□□□□ -0.72
VPS54-201ENST00000272322 CXCL6P80162 114 aa10.57□□□□□ -0.72
VPS54-201ENST00000272322 KRTAP11-1Q8IUC1 163 aa10.56□□□□□ -0.72
VPS54-201ENST00000272322 OXTP01178 125 aa10.56□□□□□ -0.72
VPS54-201ENST00000272322 FAM30AQ9NZY2 134 aa10.56□□□□□ -0.72
VPS54-201ENST00000272322 KRTAP4-16G5E9R7 235 aaPredicted RBP10.55□□□□□ -0.72
VPS54-201ENST00000272322 H3BQ85 93 aa10.55□□□□□ -0.72
VPS54-201ENST00000272322 J3KT08 172 aa10.55□□□□□ -0.72
VPS54-201ENST00000272322 TRAV7A0A075B6U4 112 aa10.54□□□□□ -0.72
VPS54-201ENST00000272322 F8WEM9 126 aa10.54□□□□□ -0.72
VPS54-201ENST00000272322 TLX1NBP0CAT3 122 aa10.54□□□□□ -0.72
VPS54-201ENST00000272322 PRYO14603 147 aa10.54□□□□□ -0.72
VPS54-201ENST00000272322 PLECQ15149 4684 aaKnown RBP10.54□□□□□ -0.72
VPS54-201ENST00000272322 IGKV4-1P06312 121 aa10.53□□□□□ -0.72
VPS54-201ENST00000272322 TMEM258P61165 79 aa10.52□□□□□ -0.72
VPS54-201ENST00000272322 LINC00476Q8WZB0 136 aa10.51□□□□□ -0.73
VPS54-201ENST00000272322 SMIM29Q86T20 159 aa10.5□□□□□ -0.73
VPS54-201ENST00000272322 PANO1I0J062 215 aa10.5□□□□□ -0.73
VPS54-201ENST00000272322 DNAH1Q9P2D7 4330 aa10.49□□□□□ -0.73
VPS54-201ENST00000272322 A0A087WSZ3 146 aa10.49□□□□□ -0.73
VPS54-201ENST00000272322 IGLV5-48A0A075B6I7 105 aa10.49□□□□□ -0.73
VPS54-201ENST00000272322 H7BZZ5 65 aa10.49□□□□□ -0.73
VPS54-201ENST00000272322 SPRR1AP35321 89 aa10.49□□□□□ -0.73
VPS54-201ENST00000272322 RPL37AP61513 92 aaKnown RBP10.48□□□□□ -0.73
VPS54-201ENST00000272322 F8WDY8 70 aa10.48□□□□□ -0.73
VPS54-201ENST00000272322 K7EQZ3 153 aa10.48□□□□□ -0.73
VPS54-201ENST00000272322 FAM236DA0A1B0GTK5 79 aa10.47□□□□□ -0.73
VPS54-201ENST00000272322 FAM236CP0DP71 79 aa10.47□□□□□ -0.73
VPS54-201ENST00000272322 WFDC13Q8IUB5 93 aa10.47□□□□□ -0.73
VPS54-201ENST00000272322 Q8NBF4 154 aa10.47□□□□□ -0.73
VPS54-201ENST00000272322 APLNQ9ULZ1 77 aa10.47□□□□□ -0.73
VPS54-201ENST00000272322 C16orf90A8MZG2 172 aa10.46□□□□□ -0.73
VPS54-201ENST00000272322 UBE2AP49459 152 aa10.46□□□□□ -0.74
VPS54-201ENST00000272322 PLA2G2DQ9UNK4 145 aa10.45□□□□□ -0.74
VPS54-201ENST00000272322 EPM2AB3EWF7 344 aa10.44□□□□□ -0.74
VPS54-201ENST00000272322 IGFL1Q6UW32 110 aa10.44□□□□□ -0.74
VPS54-201ENST00000272322 TMEM254Q8TBM7 123 aa10.44□□□□□ -0.74
VPS54-201ENST00000272322 PRR4Q16378 134 aa10.44□□□□□ -0.74
VPS54-201ENST00000272322 C4orf26Q17RF5 130 aa10.44□□□□□ -0.74
VPS54-201ENST00000272322 HRCT1Q6UXD1 115 aa10.43□□□□□ -0.74
VPS54-201ENST00000272322 IGLV5-37A0A075B6J1 123 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms