RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
ERCC8-201ENST00000265038 DDTP30046 118 aa5□□□□□ -1.61
ERCC8-201ENST00000265038 PCP2Q8IVA1 136 aa5□□□□□ -1.61
ERCC8-201ENST00000265038 A0A087X002 238 aa4.99□□□□□ -1.61
ERCC8-201ENST00000265038 IGLV6-57P01721 117 aa4.99□□□□□ -1.61
ERCC8-201ENST00000265038 LINC00337Q8N6G1 96 aa4.99□□□□□ -1.61
ERCC8-201ENST00000265038 RPL13AP40429 203 aaKnown RBP4.98□□□□□ -1.61
ERCC8-201ENST00000265038 HIGD2AQ9BW72 106 aa4.98□□□□□ -1.61
ERCC8-201ENST00000265038 CRYGAP11844 174 aa4.97□□□□□ -1.61
ERCC8-201ENST00000265038 S100A7L2Q5SY68 101 aa4.97□□□□□ -1.61
ERCC8-201ENST00000265038 SCGB1D4Q6XE38 83 aa4.97□□□□□ -1.61
ERCC8-201ENST00000265038 SPANXDQ9BXN6 97 aa4.97□□□□□ -1.61
ERCC8-201ENST00000265038 SPANXCQ9NY87 97 aa4.97□□□□□ -1.61
ERCC8-201ENST00000265038 ETDCA0A1B0GVM5 59 aa4.97□□□□□ -1.61
ERCC8-201ENST00000265038 B5MCH6 92 aa4.97□□□□□ -1.61
ERCC8-201ENST00000265038 KRTAP13-2Q52LG2 175 aa4.97□□□□□ -1.61
ERCC8-201ENST00000265038 S100A12P80511 92 aa4.96□□□□□ -1.62
ERCC8-201ENST00000265038 SMCR5Q8TEV8 140 aa4.96□□□□□ -1.62
ERCC8-201ENST00000265038 TRAV23DV6A0A075B6W5 121 aa4.96□□□□□ -1.62
ERCC8-201ENST00000265038 FAM229BQ4G0N7 80 aa4.96□□□□□ -1.62
ERCC8-201ENST00000265038 HSBP1L1C9JCN9 74 aa4.95□□□□□ -1.62
ERCC8-201ENST00000265038 SCGB1D1O95968 90 aa4.95□□□□□ -1.62
ERCC8-201ENST00000265038 MUSTN1Q8IVN3 82 aa4.95□□□□□ -1.62
ERCC8-201ENST00000265038 TYMSOSQ8TAI1 123 aa4.95□□□□□ -1.62
ERCC8-201ENST00000265038 SPRR4Q96PI1 79 aa4.95□□□□□ -1.62
ERCC8-201ENST00000265038 ZNF73O43830 326 aaPredicted RBP4.94□□□□□ -1.62
ERCC8-201ENST00000265038 ERC2-IT1O76042 136 aa4.94□□□□□ -1.62
ERCC8-201ENST00000265038 IFITM1P13164 125 aa4.94□□□□□ -1.62
ERCC8-201ENST00000265038 Q6ZVH6 145 aa4.94□□□□□ -1.62
ERCC8-201ENST00000265038 OR13C6PQ8NH95 151 aa4.94□□□□□ -1.62
ERCC8-201ENST00000265038 Q9BRP9 147 aa4.94□□□□□ -1.62
ERCC8-201ENST00000265038 PPDPFQ9H3Y8 114 aa4.94□□□□□ -1.62
ERCC8-201ENST00000265038 Q6ZRX8 168 aa4.94□□□□□ -1.62
ERCC8-201ENST00000265038 LINC00518Q8N0U6 118 aa4.94□□□□□ -1.62
ERCC8-201ENST00000265038 C3orf22Q8N5N4 141 aa4.92□□□□□ -1.62
ERCC8-201ENST00000265038 ZNF706Q9Y5V0 76 aaPredicted RBP4.92□□□□□ -1.62
ERCC8-201ENST00000265038 COPS9Q8WXC6 57 aa4.92□□□□□ -1.62
ERCC8-201ENST00000265038 CBY1Q9Y3M2 126 aa4.92□□□□□ -1.62
ERCC8-201ENST00000265038 TSPAN13O95857 204 aa4.91□□□□□ -1.62
ERCC8-201ENST00000265038 LINC00483Q53H64 154 aa4.91□□□□□ -1.62
ERCC8-201ENST00000265038 JOSD1Q15040 202 aaPredicted RBP4.9□□□□□ -1.62
ERCC8-201ENST00000265038 GAGE2AQ6NT46 116 aa4.9□□□□□ -1.62
ERCC8-201ENST00000265038 SVIPQ8NHG7 77 aa4.9□□□□□ -1.62
ERCC8-201ENST00000265038 COX8AP10176 69 aa4.9□□□□□ -1.63
ERCC8-201ENST00000265038 HINT1P49773 126 aaPredicted RBP4.9□□□□□ -1.63
ERCC8-201ENST00000265038 C6orf99Q4VX62 202 aa4.89□□□□□ -1.63
ERCC8-201ENST00000265038 LINC00304Q8N9R0 145 aa4.89□□□□□ -1.63
ERCC8-201ENST00000265038 A6NDN8 102 aa4.89□□□□□ -1.63
ERCC8-201ENST00000265038 DLEU1O43261 78 aa4.89□□□□□ -1.63
ERCC8-201ENST00000265038 ELOF1P60002 83 aaKnown RBP4.89□□□□□ -1.63
ERCC8-201ENST00000265038 ST20-AS1Q8NBB2 130 aa4.89□□□□□ -1.63
ERCC8-201ENST00000265038 COX7BP24311 80 aa4.88□□□□□ -1.63
ERCC8-201ENST00000265038 SPATA45Q537H7 98 aa4.88□□□□□ -1.63
ERCC8-201ENST00000265038 C14orf144Q96I85 54 aa4.88□□□□□ -1.63
ERCC8-201ENST00000265038 PAM16Q9Y3D7 125 aa4.88□□□□□ -1.63
ERCC8-201ENST00000265038 TRAV13-2A0A0B4J235 113 aa4.87□□□□□ -1.63
ERCC8-201ENST00000265038 A4D1N5 150 aa4.87□□□□□ -1.63
ERCC8-201ENST00000265038 DHRS4-AS1Q9P1J3 65 aa4.87□□□□□ -1.63
ERCC8-201ENST00000265038 TRBV7-6A0A0J9YX20 115 aa4.86□□□□□ -1.63
ERCC8-201ENST00000265038 PYY3Q5JQD4 70 aa4.86□□□□□ -1.63
ERCC8-201ENST00000265038 SMIM11BQ8TCY0 68 aa4.86□□□□□ -1.63
ERCC8-201ENST00000265038 VAMP8Q9BV40 100 aa4.86□□□□□ -1.63
ERCC8-201ENST00000265038 PRR4Q16378 134 aa4.85□□□□□ -1.63
ERCC8-201ENST00000265038 Q8NBF4 154 aa4.85□□□□□ -1.63
ERCC8-201ENST00000265038 HIST1H4GQ99525 98 aa4.85□□□□□ -1.63
ERCC8-201ENST00000265038 LRP2P98164 4655 aa4.85□□□□□ -1.63
ERCC8-201ENST00000265038 IGLV9-49A0A0B4J1Y8 123 aa4.85□□□□□ -1.63
ERCC8-201ENST00000265038 A0A1B0GWB2 263 aa4.85□□□□□ -1.63
ERCC8-201ENST00000265038 SPRR1BP22528 89 aa4.85□□□□□ -1.63
ERCC8-201ENST00000265038 CTAG1AP78358 180 aa4.85□□□□□ -1.63
ERCC8-201ENST00000265038 C2orf91Q6ZV80 131 aa4.85□□□□□ -1.63
ERCC8-201ENST00000265038 MOBPQ13875 183 aa4.84□□□□□ -1.63
ERCC8-201ENST00000265038 SPAG11AQ6PDA7 123 aa4.84□□□□□ -1.63
ERCC8-201ENST00000265038 SLC25A34Q6PIV7 304 aa4.84□□□□□ -1.63
ERCC8-201ENST00000265038 SSBP3-AS1Q7Z2R9 100 aa4.84□□□□□ -1.63
ERCC8-201ENST00000265038 HIGD1BQ9P298 99 aa4.84□□□□□ -1.63
ERCC8-201ENST00000265038 C12orf57Q99622 126 aa4.84□□□□□ -1.64
ERCC8-201ENST00000265038 RETNLBQ9BQ08 111 aa4.84□□□□□ -1.64
ERCC8-201ENST00000265038 LPAP08519 4548 aa4.82□□□□□ -1.64
ERCC8-201ENST00000265038 UBR4Q5T4S7 5183 aa4.82□□□□□ -1.64
ERCC8-201ENST00000265038 LINC01547P58512 204 aaPredicted RBP4.82□□□□□ -1.64
ERCC8-201ENST00000265038 DEFB105AQ8NG35 78 aa4.82□□□□□ -1.64
ERCC8-201ENST00000265038 SPINK1P00995 79 aa4.81□□□□□ -1.64
ERCC8-201ENST00000265038 CFC1BP0CG36 223 aa4.81□□□□□ -1.64
ERCC8-201ENST00000265038 CFC1P0CG37 223 aa4.81□□□□□ -1.64
ERCC8-201ENST00000265038 TAL2Q16559 108 aa4.81□□□□□ -1.64
ERCC8-201ENST00000265038 C9orf153Q5TBE3 101 aa4.81□□□□□ -1.64
ERCC8-201ENST00000265038 IGLV5-48A0A075B6I7 105 aa4.8□□□□□ -1.64
ERCC8-201ENST00000265038 TEX49A0A1B0GTD5 131 aa4.8□□□□□ -1.64
ERCC8-201ENST00000265038 VAMP3Q15836 100 aa4.8□□□□□ -1.64
ERCC8-201ENST00000265038 LINC00575Q6W349 94 aa4.8□□□□□ -1.64
ERCC8-201ENST00000265038 SMIM29Q86T20 159 aa4.8□□□□□ -1.64
ERCC8-201ENST00000265038 LAMTOR3Q9UHA4 124 aa4.8□□□□□ -1.64
ERCC8-201ENST00000265038 CEND1Q8N111 149 aa4.79□□□□□ -1.64
ERCC8-201ENST00000265038 NHP2Q9NX24 153 aaKnown RBP4.79□□□□□ -1.64
ERCC8-201ENST00000265038 A0A0B4J2C4 111 aa4.79□□□□□ -1.64
ERCC8-201ENST00000265038 Q1RN00 199 aa4.79□□□□□ -1.64
ERCC8-201ENST00000265038 XP32Q5T750 250 aa4.79□□□□□ -1.64
ERCC8-201ENST00000265038 Q8N377 158 aa4.79□□□□□ -1.64
ERCC8-201ENST00000265038 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms