RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 PPDPFQ9H3Y8 114 aa10.78□□□□□ -0.68
COPE-201ENST00000262812 ZNF706Q9Y5V0 76 aaPredicted RBP10.78□□□□□ -0.68
COPE-201ENST00000262812 TRAV23DV6A0A075B6W5 121 aa10.77□□□□□ -0.69
COPE-201ENST00000262812 S100A6P06703 90 aa10.77□□□□□ -0.69
COPE-201ENST00000262812 C3orf22Q8N5N4 141 aa10.77□□□□□ -0.69
COPE-201ENST00000262812 OR13C6PQ8NH95 151 aa10.77□□□□□ -0.69
COPE-201ENST00000262812 SPANXCQ9NY87 97 aa10.76□□□□□ -0.69
COPE-201ENST00000262812 ERC2-IT1O76042 136 aa10.75□□□□□ -0.69
COPE-201ENST00000262812 AKR1D1P51857 326 aa10.75□□□□□ -0.69
COPE-201ENST00000262812 PCP2Q8IVA1 136 aa10.75□□□□□ -0.69
COPE-201ENST00000262812 LINC00304Q8N9R0 145 aa10.75□□□□□ -0.69
COPE-201ENST00000262812 ZNF73O43830 326 aaPredicted RBP10.73□□□□□ -0.69
COPE-201ENST00000262812 GAGE2AQ6NT46 116 aa10.73□□□□□ -0.69
COPE-201ENST00000262812 Q9BRP9 147 aa10.73□□□□□ -0.69
COPE-201ENST00000262812 LPAP08519 4548 aa10.72□□□□□ -0.69
COPE-201ENST00000262812 SNRPEP62304 92 aaKnown RBP10.72□□□□□ -0.69
COPE-201ENST00000262812 Q6ZRX8 168 aa10.72□□□□□ -0.69
COPE-201ENST00000262812 SPANXDQ9BXN6 97 aa10.71□□□□□ -0.69
COPE-201ENST00000262812 JOSD1Q15040 202 aaPredicted RBP10.7□□□□□ -0.7
COPE-201ENST00000262812 HINT1P49773 126 aaPredicted RBP10.69□□□□□ -0.7
COPE-201ENST00000262812 CBY1Q9Y3M2 126 aa10.69□□□□□ -0.7
COPE-201ENST00000262812 MUSTN1Q8IVN3 82 aa10.68□□□□□ -0.7
COPE-201ENST00000262812 LINC00518Q8N0U6 118 aa10.68□□□□□ -0.7
COPE-201ENST00000262812 RNF213Q63HN8 5207 aa10.67□□□□□ -0.7
COPE-201ENST00000262812 HSBP1L1C9JCN9 74 aa10.67□□□□□ -0.7
COPE-201ENST00000262812 IFITM1P13164 125 aa10.66□□□□□ -0.7
COPE-201ENST00000262812 LINC00483Q53H64 154 aa10.66□□□□□ -0.7
COPE-201ENST00000262812 COPS9Q8WXC6 57 aa10.66□□□□□ -0.7
COPE-201ENST00000262812 RETNLBQ9BQ08 111 aa10.66□□□□□ -0.7
COPE-201ENST00000262812 SCGB1D1O95968 90 aa10.65□□□□□ -0.7
COPE-201ENST00000262812 IGLV9-49A0A0B4J1Y8 123 aa10.64□□□□□ -0.71
COPE-201ENST00000262812 C4orf48Q5BLP8 95 aa10.64□□□□□ -0.71
COPE-201ENST00000262812 Q6ZVH6 145 aa10.64□□□□□ -0.71
COPE-201ENST00000262812 ST20-AS1Q8NBB2 130 aa10.64□□□□□ -0.71
COPE-201ENST00000262812 Q8NBF4 154 aa10.64□□□□□ -0.71
COPE-201ENST00000262812 A6NDN8 102 aa10.63□□□□□ -0.71
COPE-201ENST00000262812 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
COPE-201ENST00000262812 COX7BP24311 80 aa10.61□□□□□ -0.71
COPE-201ENST00000262812 MOBPQ13875 183 aa10.61□□□□□ -0.71
COPE-201ENST00000262812 C6orf99Q4VX62 202 aa10.61□□□□□ -0.71
COPE-201ENST00000262812 SPAG11AQ6PDA7 123 aa10.61□□□□□ -0.71
COPE-201ENST00000262812 DHRS4-AS1Q9P1J3 65 aa10.58□□□□□ -0.72
COPE-201ENST00000262812 ELOF1P60002 83 aaKnown RBP10.56□□□□□ -0.72
COPE-201ENST00000262812 CTAG1AP78358 180 aa10.56□□□□□ -0.72
COPE-201ENST00000262812 C9orf153Q5TBE3 101 aa10.55□□□□□ -0.72
COPE-201ENST00000262812 SSBP3-AS1Q7Z2R9 100 aa10.55□□□□□ -0.72
COPE-201ENST00000262812 TRAV13-2A0A0B4J235 113 aa10.54□□□□□ -0.72
COPE-201ENST00000262812 IGLV7-46A0A075B6I9 117 aa10.53□□□□□ -0.72
COPE-201ENST00000262812 DEFB105AQ8NG35 78 aa10.53□□□□□ -0.72
COPE-201ENST00000262812 SPINK1P00995 79 aa10.52□□□□□ -0.73
COPE-201ENST00000262812 TRBV7-6A0A0J9YX20 115 aa10.51□□□□□ -0.73
COPE-201ENST00000262812 TAL2Q16559 108 aa10.51□□□□□ -0.73
COPE-201ENST00000262812 SMIM11BQ8TCY0 68 aa10.51□□□□□ -0.73
COPE-201ENST00000262812 A4D1N5 150 aa10.5□□□□□ -0.73
COPE-201ENST00000262812 A0A1B0GWB2 263 aa10.49□□□□□ -0.73
COPE-201ENST00000262812 COX8AP10176 69 aa10.49□□□□□ -0.73
COPE-201ENST00000262812 HIST1H4GQ99525 98 aa10.49□□□□□ -0.73
COPE-201ENST00000262812 SPRR1BP22528 89 aa10.48□□□□□ -0.73
COPE-201ENST00000262812 C14orf144Q96I85 54 aa10.48□□□□□ -0.73
COPE-201ENST00000262812 SLC25A34Q6PIV7 304 aa10.47□□□□□ -0.73
COPE-201ENST00000262812 LAMTOR3Q9UHA4 124 aa10.47□□□□□ -0.73
COPE-201ENST00000262812 PAM16Q9Y3D7 125 aa10.47□□□□□ -0.73
COPE-201ENST00000262812 C12orf57Q99622 126 aa10.46□□□□□ -0.73
COPE-201ENST00000262812 Q1RN00 199 aa10.45□□□□□ -0.74
COPE-201ENST00000262812 SPATA45Q537H7 98 aa10.45□□□□□ -0.74
COPE-201ENST00000262812 TEX49A0A1B0GTD5 131 aa10.44□□□□□ -0.74
COPE-201ENST00000262812 CDIP1Q9H305 208 aa10.44□□□□□ -0.74
COPE-201ENST00000262812 DLEU1O43261 78 aa10.43□□□□□ -0.74
COPE-201ENST00000262812 VAMP3Q15836 100 aa10.43□□□□□ -0.74
COPE-201ENST00000262812 HRCT1Q6UXD1 115 aa10.43□□□□□ -0.74
COPE-201ENST00000262812 TPRXLQ17RH7 258 aa10.42□□□□□ -0.74
COPE-201ENST00000262812 FP248Q71RG6 208 aaPredicted RBP10.42□□□□□ -0.74
COPE-201ENST00000262812 VAMP8Q9BV40 100 aa10.42□□□□□ -0.74
COPE-201ENST00000262812 Q8N377 158 aa10.41□□□□□ -0.74
COPE-201ENST00000262812 RPS29P62273 56 aaKnown RBP10.4□□□□□ -0.74
COPE-201ENST00000262812 NHP2Q9NX24 153 aaKnown RBP10.4□□□□□ -0.74
COPE-201ENST00000262812 SLC25A20O43772 301 aa10.39□□□□□ -0.75
COPE-201ENST00000262812 LINC01547P58512 204 aaPredicted RBP10.39□□□□□ -0.75
COPE-201ENST00000262812 SMIM29Q86T20 159 aa10.38□□□□□ -0.75
COPE-201ENST00000262812 IGLV5-48A0A075B6I7 105 aa10.37□□□□□ -0.75
COPE-201ENST00000262812 LINC00575Q6W349 94 aa10.37□□□□□ -0.75
COPE-201ENST00000262812 TMA7Q9Y2S6 64 aaKnown RBP10.37□□□□□ -0.75
COPE-201ENST00000262812 H7C2G1 150 aa10.36□□□□□ -0.75
COPE-201ENST00000262812 PRO1933Q9H354 126 aa10.36□□□□□ -0.75
COPE-201ENST00000262812 HIGD1BQ9P298 99 aa10.35□□□□□ -0.75
COPE-201ENST00000262812 hADV29S1A0JD25 119 aa10.34□□□□□ -0.75
COPE-201ENST00000262812 CFC1BP0CG36 223 aa10.34□□□□□ -0.75
COPE-201ENST00000262812 CFC1P0CG37 223 aa10.34□□□□□ -0.75
COPE-201ENST00000262812 C2orf91Q6ZV80 131 aa10.34□□□□□ -0.75
COPE-201ENST00000262812 MUC2Q02817 5179 aa10.33□□□□□ -0.76
COPE-201ENST00000262812 A0A0G2JQZ4 141 aa10.33□□□□□ -0.76
COPE-201ENST00000262812 KRTAP13-3Q3SY46 172 aa10.33□□□□□ -0.76
COPE-201ENST00000262812 RAB37Q96AX2 223 aa10.33□□□□□ -0.76
COPE-201ENST00000262812 PYY3Q5JQD4 70 aa10.31□□□□□ -0.76
COPE-201ENST00000262812 Q6ZQY7 126 aa10.3□□□□□ -0.76
COPE-201ENST00000262812 LIMD2Q9BT23 127 aa10.3□□□□□ -0.76
COPE-201ENST00000262812 BVES-AS1Q5T3Y7 98 aa10.29□□□□□ -0.76
COPE-201ENST00000262812 CEND1Q8N111 149 aa10.28□□□□□ -0.76
COPE-201ENST00000262812 CD164Q04900 197 aa10.27□□□□□ -0.77
COPE-201ENST00000262812 F8WEM9 126 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms