RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 HSPG2P98160 4391 aa15.24■□□□□ 0.03
SCN1B-201ENST00000262631 C7orf33Q8WU49 177 aa15.23■□□□□ 0.03
SCN1B-201ENST00000262631 A4D1N5 150 aa15.22■□□□□ 0.03
SCN1B-201ENST00000262631 LINC00167Q96N53 147 aa15.22■□□□□ 0.03
SCN1B-201ENST00000262631 KRTAP11-1Q8IUC1 163 aa15.22■□□□□ 0.03
SCN1B-201ENST00000262631 PPDPFLQ8WWR9 84 aa15.21■□□□□ 0.03
SCN1B-201ENST00000262631 M0R378 163 aa15.2■□□□□ 0.02
SCN1B-201ENST00000262631 SMR3BP02814 79 aaPredicted RBP15.2■□□□□ 0.02
SCN1B-201ENST00000262631 RPL37AP8A6NKH3 93 aa15.19■□□□□ 0.02
SCN1B-201ENST00000262631 TSPAN13O95857 204 aa15.19■□□□□ 0.02
SCN1B-201ENST00000262631 FAT1Q14517 4588 aa15.18■□□□□ 0.02
SCN1B-201ENST00000262631 TRBV10-2A0A0K0K1G8 114 aa15.18■□□□□ 0.02
SCN1B-201ENST00000262631 TEN1Q86WV5 123 aa15.18■□□□□ 0.02
SCN1B-201ENST00000262631 LINC00337Q8N6G1 96 aa15.17■□□□□ 0.02
SCN1B-201ENST00000262631 UBE2BP63146 152 aa15.16■□□□□ 0.02
SCN1B-201ENST00000262631 TRBV10-3A0A0K0K1G6 114 aa15.15■□□□□ 0.02
SCN1B-201ENST00000262631 PSMB2P49721 201 aa15.15■□□□□ 0.02
SCN1B-201ENST00000262631 SMCPP49901 116 aaPredicted RBP15.15■□□□□ 0.02
SCN1B-201ENST00000262631 IGLV1-50A0A075B6I6 118 aa15.14■□□□□ 0.01
SCN1B-201ENST00000262631 CDIP1Q9H305 208 aa15.14■□□□□ 0.01
SCN1B-201ENST00000262631 IGLV6-57P01721 117 aa15.12■□□□□ 0.01
SCN1B-201ENST00000262631 CFC1BP0CG36 223 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 CFC1P0CG37 223 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 S100A7L2Q5SY68 101 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 LINC00528Q8N1L1 170 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 VPS13BQ7Z7G8 4022 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 OR13C6PQ8NH95 151 aa15.1■□□□□ 0.01
SCN1B-201ENST00000262631 KRTAP17-1Q9BYP8 105 aa15.1■□□□□ 0.01
SCN1B-201ENST00000262631 PRO1854Q9UHT4 67 aa15.09■□□□□ 0.01
SCN1B-201ENST00000262631 PSORS1C2Q9UIG4 136 aa15.09■□□□□ 0.01
SCN1B-201ENST00000262631 SVIPQ8NHG7 77 aa15.07■□□□□ 0
SCN1B-201ENST00000262631 TMEM126AQ9H061 195 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 TRAV13-2A0A0B4J235 113 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 A0A0B4J2C4 111 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 TCL1BO95988 128 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 LINC01600Q96MT4 127 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 KCNQ1DNQ9H478 68 aa15.05■□□□□ -0
SCN1B-201ENST00000262631 SCGB1C2P0DMR2 95 aa15.02□□□□□ -0.01
SCN1B-201ENST00000262631 REG3GQ6UW15 175 aa15.02□□□□□ -0.01
SCN1B-201ENST00000262631 TRAV23DV6A0A075B6W5 121 aa15.01□□□□□ -0.01
SCN1B-201ENST00000262631 MT-ATP8P03928 68 aa15.01□□□□□ -0.01
SCN1B-201ENST00000262631 RPL13AP40429 203 aaKnown RBP15.01□□□□□ -0.01
SCN1B-201ENST00000262631 PRYO14603 147 aa15□□□□□ -0.01
SCN1B-201ENST00000262631 RPL37AP61513 92 aaKnown RBP15□□□□□ -0.01
SCN1B-201ENST00000262631 C1orf137Q5JT78 98 aa15□□□□□ -0.01
SCN1B-201ENST00000262631 ANKRD29Q8N6D5 301 aa15□□□□□ -0.01
SCN1B-201ENST00000262631 SLC25A20O43772 301 aa14.98□□□□□ -0.01
SCN1B-201ENST00000262631 SPRR1AP35321 89 aa14.98□□□□□ -0.01
SCN1B-201ENST00000262631 KRTAP10-4P60372 401 aaPredicted RBP14.98□□□□□ -0.01
SCN1B-201ENST00000262631 SMIM11BQ8TCY0 68 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 H7C2G1 150 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 ATXN8Q156A1 80 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 Q5VSD8 79 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 Q8N1X5 172 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 KRTAP4-16G5E9R7 235 aaPredicted RBP14.96□□□□□ -0.01
SCN1B-201ENST00000262631 FAM229AH3BQW9 127 aa14.96□□□□□ -0.01
SCN1B-201ENST00000262631 ZNF73O43830 326 aaPredicted RBP14.96□□□□□ -0.01
SCN1B-201ENST00000262631 BCE1O60756 84 aa14.96□□□□□ -0.01
SCN1B-201ENST00000262631 HERC2O95714 4834 aa14.95□□□□□ -0.02
SCN1B-201ENST00000262631 SRRM2Q9UQ35 2752 aaKnown RBP14.94□□□□□ -0.02
SCN1B-201ENST00000262631 C6orf99Q4VX62 202 aa14.93□□□□□ -0.02
SCN1B-201ENST00000262631 Q6Q795 121 aa14.93□□□□□ -0.02
SCN1B-201ENST00000262631 C9JAW5 83 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 IGLV7-43P04211 117 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 PRLHP81277 87 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 FAM19A1Q7Z5A9 133 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 ANAPC13Q9BS18 74 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 DIRC1Q969H9 104 aa14.9□□□□□ -0.02
SCN1B-201ENST00000262631 ETDCA0A1B0GVM5 59 aa14.89□□□□□ -0.03
SCN1B-201ENST00000262631 PLA2G1BP04054 148 aaKnown RBP14.89□□□□□ -0.03
SCN1B-201ENST00000262631 KRTAP13-1Q8IUC0 172 aa14.89□□□□□ -0.03
SCN1B-201ENST00000262631 B5MCH6 92 aa14.88□□□□□ -0.03
SCN1B-201ENST00000262631 SNCGO76070 127 aa14.87□□□□□ -0.03
SCN1B-201ENST00000262631 RPL28P46779 137 aaKnown RBP14.87□□□□□ -0.03
SCN1B-201ENST00000262631 UBE2AP49459 152 aa14.87□□□□□ -0.03
SCN1B-201ENST00000262631 Q1RN00 199 aa14.87□□□□□ -0.03
SCN1B-201ENST00000262631 H3BT86 120 aa14.84□□□□□ -0.03
SCN1B-201ENST00000262631 Q6ZRX8 168 aa14.84□□□□□ -0.03
SCN1B-201ENST00000262631 ZNF861PO60384 105 aa14.84□□□□□ -0.03
SCN1B-201ENST00000262631 KRTAP4-5Q9BYR2 181 aa14.84□□□□□ -0.03
SCN1B-201ENST00000262631 COX6CP09669 75 aa14.83□□□□□ -0.04
SCN1B-201ENST00000262631 ELOF1P60002 83 aaKnown RBP14.83□□□□□ -0.04
SCN1B-201ENST00000262631 Q9BRP9 147 aa14.82□□□□□ -0.04
SCN1B-201ENST00000262631 COX7BP24311 80 aa14.81□□□□□ -0.04
SCN1B-201ENST00000262631 FAM240AA0A1B0GVK7 77 aa14.81□□□□□ -0.04
SCN1B-201ENST00000262631 H0Y9J4 135 aa14.81□□□□□ -0.04
SCN1B-201ENST00000262631 TRIAP1O43715 76 aa14.81□□□□□ -0.04
SCN1B-201ENST00000262631 TRBV7-6A0A0J9YX20 115 aa14.8□□□□□ -0.04
SCN1B-201ENST00000262631 HIGD2AQ9BW72 106 aa14.8□□□□□ -0.04
SCN1B-201ENST00000262631 SMCR5Q8TEV8 140 aa14.78□□□□□ -0.04
SCN1B-201ENST00000262631 NDUFV3P56181 108 aaKnown RBP14.77□□□□□ -0.04
SCN1B-201ENST00000262631 ERC2-IT1O76042 136 aa14.75□□□□□ -0.05
SCN1B-201ENST00000262631 SPINK6Q6UWN8 80 aa14.74□□□□□ -0.05
SCN1B-201ENST00000262631 LST1O00453 97 aa14.71□□□□□ -0.05
SCN1B-201ENST00000262631 PKHD1L1Q86WI1 4243 aa14.71□□□□□ -0.05
SCN1B-201ENST00000262631 LINC00575Q6W349 94 aa14.71□□□□□ -0.06
SCN1B-201ENST00000262631 FAM218AQ96MZ4 157 aa14.71□□□□□ -0.06
SCN1B-201ENST00000262631 DHRS4-AS1Q9P1J3 65 aa14.7□□□□□ -0.06
SCN1B-201ENST00000262631 ABCA13Q86UQ4 5058 aa14.69□□□□□ -0.06
SCN1B-201ENST00000262631 TEX49A0A1B0GTD5 131 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms