RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
SPTLC1-201ENST00000262554 LINC00846Q9NV44 126 aa8.38□□□□□ -1.07
SPTLC1-201ENST00000262554 NUPR2A6NF83 97 aa8.36□□□□□ -1.07
SPTLC1-201ENST00000262554 H3BS24 57 aa8.36□□□□□ -1.07
SPTLC1-201ENST00000262554 LOC110117498A0A087WWA1 95 aa8.35□□□□□ -1.07
SPTLC1-201ENST00000262554 FAM168BA1KXE4 195 aa8.35□□□□□ -1.07
SPTLC1-201ENST00000262554 DSCR8Q96T75 97 aa8.34□□□□□ -1.07
SPTLC1-201ENST00000262554 PRYO14603 147 aa8.34□□□□□ -1.07
SPTLC1-201ENST00000262554 Q6JHZ5 121 aa8.34□□□□□ -1.07
SPTLC1-201ENST00000262554 Q6ZQT0 140 aa8.34□□□□□ -1.07
SPTLC1-201ENST00000262554 STAB2Q8WWQ8 2551 aa8.34□□□□□ -1.07
SPTLC1-201ENST00000262554 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
SPTLC1-201ENST00000262554 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
SPTLC1-201ENST00000262554 PDE6GP18545 87 aa8.33□□□□□ -1.08
SPTLC1-201ENST00000262554 CNBPP62633 177 aaKnown RBP8.33□□□□□ -1.08
SPTLC1-201ENST00000262554 C14orf177Q52M58 125 aa8.33□□□□□ -1.08
SPTLC1-201ENST00000262554 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
SPTLC1-201ENST00000262554 MRPL55Q7Z7F7 128 aaKnown RBP8.32□□□□□ -1.08
SPTLC1-201ENST00000262554 KRTAP7-1Q8IUC3 87 aa8.31□□□□□ -1.08
SPTLC1-201ENST00000262554 DHRS4-AS1Q9P1J3 65 aa8.3□□□□□ -1.08
SPTLC1-201ENST00000262554 ETDCA0A1B0GVM5 59 aa8.3□□□□□ -1.08
SPTLC1-201ENST00000262554 Q6ZRX8 168 aa8.3□□□□□ -1.08
SPTLC1-201ENST00000262554 IGKV3D-7A0A0C4DH55 119 aa8.29□□□□□ -1.08
SPTLC1-201ENST00000262554 NBDYA0A0U1RRE5 68 aa8.29□□□□□ -1.08
SPTLC1-201ENST00000262554 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
SPTLC1-201ENST00000262554 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
SPTLC1-201ENST00000262554 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
SPTLC1-201ENST00000262554 B5MCH6 92 aa8.29□□□□□ -1.08
SPTLC1-201ENST00000262554 SPRR1AP35321 89 aa8.29□□□□□ -1.08
SPTLC1-201ENST00000262554 UBL5Q9BZL1 73 aa8.29□□□□□ -1.08
SPTLC1-201ENST00000262554 KRTAP4-16G5E9R7 235 aaPredicted RBP8.28□□□□□ -1.08
SPTLC1-201ENST00000262554 A0A096LNI7 61 aa8.28□□□□□ -1.08
SPTLC1-201ENST00000262554 TRBV7-4A0A0J9YYF1 115 aa8.28□□□□□ -1.08
SPTLC1-201ENST00000262554 ATP5EP2Q5VTU8 51 aa8.28□□□□□ -1.08
SPTLC1-201ENST00000262554 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1-201ENST00000262554 IGKV2-24A0A0C4DH68 120 aa8.26□□□□□ -1.09
SPTLC1-201ENST00000262554 DNAH9Q9NYC9 4486 aa8.25□□□□□ -1.09
SPTLC1-201ENST00000262554 REG3GQ6UW15 175 aa8.25□□□□□ -1.09
SPTLC1-201ENST00000262554 DEFB105AQ8NG35 78 aa8.25□□□□□ -1.09
SPTLC1-201ENST00000262554 Q9BRP9 147 aa8.25□□□□□ -1.09
SPTLC1-201ENST00000262554 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
SPTLC1-201ENST00000262554 M0R2N4 97 aa8.23□□□□□ -1.09
SPTLC1-201ENST00000262554 Q8N377 158 aa8.23□□□□□ -1.09
SPTLC1-201ENST00000262554 PKIGQ9Y2B9 76 aa8.23□□□□□ -1.09
SPTLC1-201ENST00000262554 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
SPTLC1-201ENST00000262554 A0A1W2PNN7 141 aa8.21□□□□□ -1.09
SPTLC1-201ENST00000262554 HIST1H4AP62805 103 aaKnown RBP8.21□□□□□ -1.09
SPTLC1-201ENST00000262554 UBE2BP63146 152 aa8.21□□□□□ -1.09
SPTLC1-201ENST00000262554 LINC01547P58512 204 aaPredicted RBP8.21□□□□□ -1.1
SPTLC1-201ENST00000262554 Q6ZRN7 208 aaPredicted RBP8.21□□□□□ -1.1
SPTLC1-201ENST00000262554 Q6ZVQ6 151 aa8.2□□□□□ -1.1
SPTLC1-201ENST00000262554 C9orf163Q8N9P6 203 aa8.2□□□□□ -1.1
SPTLC1-201ENST00000262554 IGLV5-48A0A075B6I7 105 aa8.19□□□□□ -1.1
SPTLC1-201ENST00000262554 CCDC179H3BU77 68 aa8.19□□□□□ -1.1
SPTLC1-201ENST00000262554 A0A087WVE0 104 aa8.18□□□□□ -1.1
SPTLC1-201ENST00000262554 ATOX1O00244 68 aa8.18□□□□□ -1.1
SPTLC1-201ENST00000262554 ST20-AS1Q8NBB2 130 aa8.18□□□□□ -1.1
SPTLC1-201ENST00000262554 LYSTQ99698 3801 aa8.18□□□□□ -1.1
SPTLC1-201ENST00000262554 ERC2-IT1O76042 136 aa8.17□□□□□ -1.1
SPTLC1-201ENST00000262554 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
SPTLC1-201ENST00000262554 HAMPP81172 84 aa8.17□□□□□ -1.1
SPTLC1-201ENST00000262554 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
SPTLC1-201ENST00000262554 DYNC2H1Q8NCM8 4307 aaKnown RBP8.17□□□□□ -1.1
SPTLC1-201ENST00000262554 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
SPTLC1-201ENST00000262554 FAM19A1Q7Z5A9 133 aa8.17□□□□□ -1.1
SPTLC1-201ENST00000262554 C3orf22Q8N5N4 141 aa8.16□□□□□ -1.1
SPTLC1-201ENST00000262554 CXCL6P80162 114 aa8.15□□□□□ -1.1
SPTLC1-201ENST00000262554 TENM2Q9NT68 2774 aa8.15□□□□□ -1.11
SPTLC1-201ENST00000262554 PHF5AQ7RTV0 110 aaKnown RBP8.14□□□□□ -1.11
SPTLC1-201ENST00000262554 PRLHP81277 87 aa8.13□□□□□ -1.11
SPTLC1-201ENST00000262554 UQCRQO14949 82 aa8.12□□□□□ -1.11
SPTLC1-201ENST00000262554 FUSP35637 526 aaKnown RBP eCLIP8.12□□□□□ -1.11
SPTLC1-201ENST00000262554 C1orf137Q5JT78 98 aa8.12□□□□□ -1.11
SPTLC1-201ENST00000262554 A0A087WTM6 91 aa8.11□□□□□ -1.11
SPTLC1-201ENST00000262554 A0A1B0GW54 56 aa8.11□□□□□ -1.11
SPTLC1-201ENST00000262554 DNAH7Q8WXX0 4024 aa8.11□□□□□ -1.11
SPTLC1-201ENST00000262554 COX7CP15954 63 aa8.11□□□□□ -1.11
SPTLC1-201ENST00000262554 DPH3Q96FX2 82 aa8.11□□□□□ -1.11
SPTLC1-201ENST00000262554 HIGD2AQ9BW72 106 aa8.11□□□□□ -1.11
SPTLC1-201ENST00000262554 F8WEM9 126 aa8.1□□□□□ -1.11
SPTLC1-201ENST00000262554 NREPQ16612 68 aa8.1□□□□□ -1.11
SPTLC1-201ENST00000262554 Q6ZR54 194 aa8.1□□□□□ -1.11
SPTLC1-201ENST00000262554 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
SPTLC1-201ENST00000262554 H0Y9J4 135 aa8.09□□□□□ -1.11
SPTLC1-201ENST00000262554 C3orf84H3BNL1 204 aa8.09□□□□□ -1.11
SPTLC1-201ENST00000262554 MEGF8Q7Z7M0 2845 aa8.09□□□□□ -1.11
SPTLC1-201ENST00000262554 SMIM29Q86T20 159 aa8.09□□□□□ -1.12
SPTLC1-201ENST00000262554 KRTAP11-1Q8IUC1 163 aa8.09□□□□□ -1.12
SPTLC1-201ENST00000262554 A0A1W2PNM2 257 aa8.08□□□□□ -1.12
SPTLC1-201ENST00000262554 SCXQ7RTU7 201 aa8.08□□□□□ -1.12
SPTLC1-201ENST00000262554 SERP2Q8N6R1 65 aa8.08□□□□□ -1.12
SPTLC1-201ENST00000262554 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
SPTLC1-201ENST00000262554 PANO1I0J062 215 aa8.07□□□□□ -1.12
SPTLC1-201ENST00000262554 C9orf153Q5TBE3 101 aa8.07□□□□□ -1.12
SPTLC1-201ENST00000262554 Q8NBF4 154 aa8.07□□□□□ -1.12
SPTLC1-201ENST00000262554 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
SPTLC1-201ENST00000262554 UBE2AP49459 152 aa8.06□□□□□ -1.12
SPTLC1-201ENST00000262554 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
SPTLC1-201ENST00000262554 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
SPTLC1-201ENST00000262554 PRKDCP78527 4128 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms