RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 WWC2-AS2Q96NR7 200 aa9.55□□□□□ -0.88
CUX2-201ENST00000261726 DNAH10OSP0CZ25 163 aa9.55□□□□□ -0.88
CUX2-201ENST00000261726 C9orf129Q5T035 196 aaKnown RBP9.55□□□□□ -0.88
CUX2-201ENST00000261726 IGF2RP11717 2491 aa9.54□□□□□ -0.88
CUX2-201ENST00000261726 LRRK2Q5S007 2527 aa9.54□□□□□ -0.88
CUX2-201ENST00000261726 SPEGQ15772 3267 aa9.53□□□□□ -0.88
CUX2-201ENST00000261726 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
CUX2-201ENST00000261726 IGLV1-50A0A075B6I6 118 aa9.52□□□□□ -0.89
CUX2-201ENST00000261726 IGFL1Q6UW32 110 aa9.51□□□□□ -0.89
CUX2-201ENST00000261726 C8orf17Q9NRJ1 99 aa9.51□□□□□ -0.89
CUX2-201ENST00000261726 A0A0G2JQZ4 141 aa9.5□□□□□ -0.89
CUX2-201ENST00000261726 A0A1W2PNN7 141 aa9.5□□□□□ -0.89
CUX2-201ENST00000261726 A0A0D9SG42 100 aa9.5□□□□□ -0.89
CUX2-201ENST00000261726 SMR3BP02814 79 aaPredicted RBP9.5□□□□□ -0.89
CUX2-201ENST00000261726 CYP4F30PQ9H0H9 118 aa9.49□□□□□ -0.89
CUX2-201ENST00000261726 JMJD1CQ15652 2540 aa9.49□□□□□ -0.89
CUX2-201ENST00000261726 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
CUX2-201ENST00000261726 MYO9AB2RTY4 2548 aa9.49□□□□□ -0.89
CUX2-201ENST00000261726 LITAFQ99732 161 aa9.47□□□□□ -0.89
CUX2-201ENST00000261726 CELSR3Q9NYQ7 3312 aa9.47□□□□□ -0.89
CUX2-201ENST00000261726 WDFY4Q6ZS81 3184 aa9.47□□□□□ -0.89
CUX2-201ENST00000261726 ANAPC11Q9NYG5 84 aa9.47□□□□□ -0.89
CUX2-201ENST00000261726 M0R2T5 61 aa9.46□□□□□ -0.89
CUX2-201ENST00000261726 A0A0C4DFX4 3053 aa9.46□□□□□ -0.9
CUX2-201ENST00000261726 VPS13AQ96RL7 3174 aa9.45□□□□□ -0.9
CUX2-201ENST00000261726 A0A1B0GVX0 72 aa9.45□□□□□ -0.9
CUX2-201ENST00000261726 FN1P02751 2386 aaKnown RBP9.45□□□□□ -0.9
CUX2-201ENST00000261726 PRR15Q8IV56 129 aa9.44□□□□□ -0.9
CUX2-201ENST00000261726 KCNQ1DNQ9H478 68 aa9.44□□□□□ -0.9
CUX2-201ENST00000261726 ERC2-IT1O76042 136 aa9.43□□□□□ -0.9
CUX2-201ENST00000261726 ZNF861PO60384 105 aa9.41□□□□□ -0.9
CUX2-201ENST00000261726 RBM12B-AS1Q9P1G2 102 aa9.41□□□□□ -0.9
CUX2-201ENST00000261726 TLN1Q9Y490 2541 aaKnown RBP9.41□□□□□ -0.9
CUX2-201ENST00000261726 F8P00451 2351 aa9.41□□□□□ -0.9
CUX2-201ENST00000261726 ABCA12Q86UK0 2595 aa9.41□□□□□ -0.9
CUX2-201ENST00000261726 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
CUX2-201ENST00000261726 C15orf56Q8N910 161 aa9.4□□□□□ -0.9
CUX2-201ENST00000261726 ZFYVE26Q68DK2 2539 aa9.39□□□□□ -0.91
CUX2-201ENST00000261726 KRTAP10-11P60412 298 aa9.39□□□□□ -0.91
CUX2-201ENST00000261726 Q8N1X5 172 aa9.38□□□□□ -0.91
CUX2-201ENST00000261726 Q8N377 158 aa9.38□□□□□ -0.91
CUX2-201ENST00000261726 CDC42SE1Q9NRR8 79 aa9.38□□□□□ -0.91
CUX2-201ENST00000261726 K7EIL1 84 aa9.35□□□□□ -0.91
CUX2-201ENST00000261726 ZNF575Q86XF7 245 aa9.35□□□□□ -0.91
CUX2-201ENST00000261726 IGLV5-48A0A075B6I7 105 aa9.35□□□□□ -0.91
CUX2-201ENST00000261726 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
CUX2-201ENST00000261726 TLN2Q9Y4G6 2542 aa9.34□□□□□ -0.91
CUX2-201ENST00000261726 A0A087WTM6 91 aa9.34□□□□□ -0.91
CUX2-201ENST00000261726 CSNK1G2-AS1Q8NCQ2 148 aa9.33□□□□□ -0.92
CUX2-201ENST00000261726 SPTBN4Q9H254 2564 aa9.32□□□□□ -0.92
CUX2-201ENST00000261726 FREM2Q5SZK8 3169 aa9.32□□□□□ -0.92
CUX2-201ENST00000261726 FAM104AQ969W3 186 aa9.31□□□□□ -0.92
CUX2-201ENST00000261726 CHD8Q9HCK8 2581 aa9.31□□□□□ -0.92
CUX2-201ENST00000261726 ANKRD11Q6UB99 2663 aaPredicted RBP9.31□□□□□ -0.92
CUX2-201ENST00000261726 ZNF462Q96JM2 2506 aa9.3□□□□□ -0.92
CUX2-201ENST00000261726 PRRC2CQ9Y520 2896 aaKnown RBP9.3□□□□□ -0.92
CUX2-201ENST00000261726 IGLV7-43P04211 117 aa9.3□□□□□ -0.92
CUX2-201ENST00000261726 LINC00336Q6ZUF6 198 aa9.29□□□□□ -0.92
CUX2-201ENST00000261726 KTN1-AS1Q86SY8 53 aa9.29□□□□□ -0.92
CUX2-201ENST00000261726 LUZP6Q538Z0 58 aa9.28□□□□□ -0.92
CUX2-201ENST00000261726 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
CUX2-201ENST00000261726 PSORS1C2Q9UIG4 136 aa9.28□□□□□ -0.92
CUX2-201ENST00000261726 LCA10Q71F78 164 aa9.27□□□□□ -0.93
CUX2-201ENST00000261726 PRR34Q9NV39 138 aa9.26□□□□□ -0.93
CUX2-201ENST00000261726 CEP295Q9C0D2 2601 aa9.26□□□□□ -0.93
CUX2-201ENST00000261726 CD164Q04900 197 aa9.25□□□□□ -0.93
CUX2-201ENST00000261726 H7BZZ5 65 aa9.24□□□□□ -0.93
CUX2-201ENST00000261726 CFAP54Q96N23 3096 aa9.24□□□□□ -0.93
CUX2-201ENST00000261726 WDFY3Q8IZQ1 3526 aa9.24□□□□□ -0.93
CUX2-201ENST00000261726 CASC10Q5T4H9 136 aa9.23□□□□□ -0.93
CUX2-201ENST00000261726 C9orf163Q8N9P6 203 aa9.23□□□□□ -0.93
CUX2-201ENST00000261726 SPRR4Q96PI1 79 aa9.23□□□□□ -0.93
CUX2-201ENST00000261726 C19orf73Q9NVV2 129 aa9.22□□□□□ -0.93
CUX2-201ENST00000261726 FRYLO94915 3013 aa9.21□□□□□ -0.93
CUX2-201ENST00000261726 KRTAP10-3P60369 221 aa9.21□□□□□ -0.94
CUX2-201ENST00000261726 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.94
CUX2-201ENST00000261726 SETD2Q9BYW2 2564 aaPredicted RBP9.2□□□□□ -0.94
CUX2-201ENST00000261726 TLX1NBP0CAT3 122 aa9.2□□□□□ -0.94
CUX2-201ENST00000261726 DMDP11532 3685 aa9.2□□□□□ -0.94
CUX2-201ENST00000261726 USP9XQ93008 2570 aaPredicted RBP9.2□□□□□ -0.94
CUX2-201ENST00000261726 CAMK2N1Q7Z7J9 78 aa9.19□□□□□ -0.94
CUX2-201ENST00000261726 Q6ZSA8 131 aa9.18□□□□□ -0.94
CUX2-201ENST00000261726 A0A1W2PNM2 257 aa9.17□□□□□ -0.94
CUX2-201ENST00000261726 MGAQ8IWI9 3026 aa9.17□□□□□ -0.94
CUX2-201ENST00000261726 PKD1L2Q7Z442 2459 aa9.17□□□□□ -0.94
CUX2-201ENST00000261726 GIG44P09565 113 aaPredicted RBP9.16□□□□□ -0.94
CUX2-201ENST00000261726 PRR26Q8N8Z3 221 aa9.15□□□□□ -0.94
CUX2-201ENST00000261726 FASNP49327 2511 aaKnown RBP9.14□□□□□ -0.95
CUX2-201ENST00000261726 KLK9Q2XQG4 91 aa9.14□□□□□ -0.95
CUX2-201ENST00000261726 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
CUX2-201ENST00000261726 SPANXA2-OT1Q8N9U9 137 aa9.13□□□□□ -0.95
CUX2-201ENST00000261726 Q1T7F1 81 aa9.12□□□□□ -0.95
CUX2-201ENST00000261726 LINC00612Q8N6U2 182 aa9.12□□□□□ -0.95
CUX2-201ENST00000261726 AKAP13Q12802 2813 aa9.11□□□□□ -0.95
CUX2-201ENST00000261726 ACANP16112 2415 aa9.09□□□□□ -0.95
CUX2-201ENST00000261726 CNBPP62633 177 aaKnown RBP9.09□□□□□ -0.95
CUX2-201ENST00000261726 IGLV7-46A0A075B6I9 117 aa9.07□□□□□ -0.96
CUX2-201ENST00000261726 EPG5Q9HCE0 2579 aa9.07□□□□□ -0.96
CUX2-201ENST00000261726 ANKRD17O75179 2603 aaKnown RBP9.06□□□□□ -0.96
CUX2-201ENST00000261726 A0A1B0GU33 70 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms