RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 EGFEM1PQ0D2K5 195 aa9.57□□□□□ -0.88
SFSWAP-201ENST00000261674 ESRGQ1W209 222 aa9.57□□□□□ -0.88
SFSWAP-201ENST00000261674 ELOF1P60002 83 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-201ENST00000261674 PDE6GP18545 87 aa9.56□□□□□ -0.88
SFSWAP-201ENST00000261674 Q6ZRP5 223 aa9.56□□□□□ -0.88
SFSWAP-201ENST00000261674 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-201ENST00000261674 NKAPP1Q8N9T2 125 aa9.56□□□□□ -0.88
SFSWAP-201ENST00000261674 RPL37AP8A6NKH3 93 aa9.56□□□□□ -0.88
SFSWAP-201ENST00000261674 C4orf26Q17RF5 130 aa9.56□□□□□ -0.88
SFSWAP-201ENST00000261674 TRAV7A0A075B6U4 112 aa9.55□□□□□ -0.88
SFSWAP-201ENST00000261674 NDUFC2-KCTD14E9PQ53 114 aa9.55□□□□□ -0.88
SFSWAP-201ENST00000261674 RPS28P62857 69 aaKnown RBP9.55□□□□□ -0.88
SFSWAP-201ENST00000261674 TM2D3Q9BRN9 247 aa9.55□□□□□ -0.88
SFSWAP-201ENST00000261674 C15orf56Q8N910 161 aa9.54□□□□□ -0.88
SFSWAP-201ENST00000261674 CSMD3Q7Z407 3707 aa9.54□□□□□ -0.88
SFSWAP-201ENST00000261674 FAM236DA0A1B0GTK5 79 aa9.53□□□□□ -0.88
SFSWAP-201ENST00000261674 WIPF1O43516 503 aa9.53□□□□□ -0.88
SFSWAP-201ENST00000261674 FAM236CP0DP71 79 aa9.53□□□□□ -0.88
SFSWAP-201ENST00000261674 NREPQ16612 68 aa9.53□□□□□ -0.88
SFSWAP-201ENST00000261674 TRBV7-4A0A0J9YYF1 115 aa9.53□□□□□ -0.88
SFSWAP-201ENST00000261674 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
SFSWAP-201ENST00000261674 SYCNQ0VAF6 134 aa9.52□□□□□ -0.88
SFSWAP-201ENST00000261674 F8WEM9 126 aa9.52□□□□□ -0.89
SFSWAP-201ENST00000261674 DEFB131BA0A096LNP1 70 aa9.51□□□□□ -0.89
SFSWAP-201ENST00000261674 BPY2O14599 106 aa9.5□□□□□ -0.89
SFSWAP-201ENST00000261674 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
SFSWAP-201ENST00000261674 H7BZZ5 65 aa9.5□□□□□ -0.89
SFSWAP-201ENST00000261674 CXCL6P80162 114 aa9.5□□□□□ -0.89
SFSWAP-201ENST00000261674 SERTAD4-AS1Q5TG53 156 aa9.5□□□□□ -0.89
SFSWAP-201ENST00000261674 H3BQ85 93 aa9.48□□□□□ -0.89
SFSWAP-201ENST00000261674 KRTAP26-1Q6PEX3 210 aa9.48□□□□□ -0.89
SFSWAP-201ENST00000261674 C5orf47Q569G3 176 aa9.47□□□□□ -0.89
SFSWAP-201ENST00000261674 PRKDCP78527 4128 aaKnown RBP9.47□□□□□ -0.89
SFSWAP-201ENST00000261674 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
SFSWAP-201ENST00000261674 C11orf45Q8TAV5 145 aa9.47□□□□□ -0.89
SFSWAP-201ENST00000261674 C7orf33Q8WU49 177 aa9.47□□□□□ -0.89
SFSWAP-201ENST00000261674 FBN3Q75N90 2809 aa9.46□□□□□ -0.89
SFSWAP-201ENST00000261674 LYSTQ99698 3801 aa9.46□□□□□ -0.9
SFSWAP-201ENST00000261674 HUWE1Q7Z6Z7 4374 aaKnown RBP9.44□□□□□ -0.9
SFSWAP-201ENST00000261674 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
SFSWAP-201ENST00000261674 ST20-AS1Q8NBB2 130 aa9.43□□□□□ -0.9
SFSWAP-201ENST00000261674 ETDCA0A1B0GVM5 59 aa9.43□□□□□ -0.9
SFSWAP-201ENST00000261674 Q8N377 158 aa9.43□□□□□ -0.9
SFSWAP-201ENST00000261674 DNAH3Q8TD57 4116 aa9.43□□□□□ -0.9
SFSWAP-201ENST00000261674 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
SFSWAP-201ENST00000261674 KLKP1Q107X0 134 aa9.41□□□□□ -0.9
SFSWAP-201ENST00000261674 UBE2BP63146 152 aa9.41□□□□□ -0.9
SFSWAP-201ENST00000261674 LINC01556Q5JQF7 62 aa9.4□□□□□ -0.9
SFSWAP-201ENST00000261674 Q5XG85 94 aa9.4□□□□□ -0.9
SFSWAP-201ENST00000261674 TMEM254Q8TBM7 123 aa9.4□□□□□ -0.9
SFSWAP-201ENST00000261674 FUSP35637 526 aaKnown RBP eCLIP9.39□□□□□ -0.91
SFSWAP-201ENST00000261674 A0A0G2JQZ4 141 aa9.39□□□□□ -0.91
SFSWAP-201ENST00000261674 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
SFSWAP-201ENST00000261674 IGKV4-1P06312 121 aa9.39□□□□□ -0.91
SFSWAP-201ENST00000261674 FAM30AQ9NZY2 134 aa9.38□□□□□ -0.91
SFSWAP-201ENST00000261674 H3BNG1 76 aa9.38□□□□□ -0.91
SFSWAP-201ENST00000261674 SERP1Q9Y6X1 66 aa9.38□□□□□ -0.91
SFSWAP-201ENST00000261674 BCE1O60756 84 aa9.37□□□□□ -0.91
SFSWAP-201ENST00000261674 KCNQ1DNQ9H478 68 aa9.37□□□□□ -0.91
SFSWAP-201ENST00000261674 C1orf137Q5JT78 98 aa9.37□□□□□ -0.91
SFSWAP-201ENST00000261674 SRRM2Q9UQ35 2752 aaKnown RBP9.36□□□□□ -0.91
SFSWAP-201ENST00000261674 Q9BRP9 147 aa9.36□□□□□ -0.91
SFSWAP-201ENST00000261674 ERC2-IT1O76042 136 aa9.35□□□□□ -0.91
SFSWAP-201ENST00000261674 IGKV2-24A0A0C4DH68 120 aa9.35□□□□□ -0.91
SFSWAP-201ENST00000261674 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
SFSWAP-201ENST00000261674 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
SFSWAP-201ENST00000261674 DEFB116Q30KQ4 102 aa9.35□□□□□ -0.91
SFSWAP-201ENST00000261674 DNAH9Q9NYC9 4486 aa9.35□□□□□ -0.91
SFSWAP-201ENST00000261674 Q6ZRX8 168 aa9.34□□□□□ -0.91
SFSWAP-201ENST00000261674 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
SFSWAP-201ENST00000261674 SMIM29Q86T20 159 aa9.33□□□□□ -0.92
SFSWAP-201ENST00000261674 LINC00588Q9Y4M8 146 aa9.33□□□□□ -0.92
SFSWAP-201ENST00000261674 MPLKIPQ8TAP9 179 aa9.32□□□□□ -0.92
SFSWAP-201ENST00000261674 DHRS4-AS1Q9P1J3 65 aa9.32□□□□□ -0.92
SFSWAP-201ENST00000261674 IGLV1-50A0A075B6I6 118 aa9.3□□□□□ -0.92
SFSWAP-201ENST00000261674 DNAH10OSP0CZ25 163 aa9.29□□□□□ -0.92
SFSWAP-201ENST00000261674 MRPL55Q7Z7F7 128 aaKnown RBP9.29□□□□□ -0.92
SFSWAP-201ENST00000261674 LRCOL1A6NCL2 159 aa9.29□□□□□ -0.92
SFSWAP-201ENST00000261674 PRYO14603 147 aa9.29□□□□□ -0.92
SFSWAP-201ENST00000261674 NDUFC1O43677 76 aa9.29□□□□□ -0.92
SFSWAP-201ENST00000261674 B9D2Q9BPU9 175 aa9.29□□□□□ -0.92
SFSWAP-201ENST00000261674 OCR1Q9BZK8 76 aa9.29□□□□□ -0.92
SFSWAP-201ENST00000261674 IGLV5-48A0A075B6I7 105 aa9.28□□□□□ -0.92
SFSWAP-201ENST00000261674 PRLHP81277 87 aa9.27□□□□□ -0.92
SFSWAP-201ENST00000261674 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
SFSWAP-201ENST00000261674 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
SFSWAP-201ENST00000261674 PRR4Q16378 134 aa9.27□□□□□ -0.93
SFSWAP-201ENST00000261674 FP248Q71RG6 208 aaPredicted RBP9.26□□□□□ -0.93
SFSWAP-201ENST00000261674 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.26□□□□□ -0.93
SFSWAP-201ENST00000261674 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
SFSWAP-201ENST00000261674 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
SFSWAP-201ENST00000261674 Q8NBF4 154 aa9.26□□□□□ -0.93
SFSWAP-201ENST00000261674 K7EQZ3 153 aa9.25□□□□□ -0.93
SFSWAP-201ENST00000261674 DNAH7Q8WXX0 4024 aa9.24□□□□□ -0.93
SFSWAP-201ENST00000261674 PSCAO43653 123 aa9.24□□□□□ -0.93
SFSWAP-201ENST00000261674 A0A096LNI7 61 aa9.23□□□□□ -0.93
SFSWAP-201ENST00000261674 FAM229BQ4G0N7 80 aa9.23□□□□□ -0.93
SFSWAP-201ENST00000261674 REG3GQ6UW15 175 aa9.23□□□□□ -0.93
SFSWAP-201ENST00000261674 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
SFSWAP-201ENST00000261674 F8WDY8 70 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms