RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 RPL37AP8A6NKH3 93 aa12.49□□□□□ -0.41
LPCAT3-201ENST00000261407 HAMPP81172 84 aa12.49□□□□□ -0.41
LPCAT3-201ENST00000261407 NKAPP1Q8N9T2 125 aa12.49□□□□□ -0.41
LPCAT3-201ENST00000261407 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
LPCAT3-201ENST00000261407 UPK3BQ9BT76 320 aa12.48□□□□□ -0.41
LPCAT3-201ENST00000261407 LINC01547P58512 204 aaPredicted RBP12.48□□□□□ -0.41
LPCAT3-201ENST00000261407 ATP5EP2Q5VTU8 51 aa12.48□□□□□ -0.41
LPCAT3-201ENST00000261407 DNAH9Q9NYC9 4486 aa12.47□□□□□ -0.41
LPCAT3-201ENST00000261407 KRTAP7-1Q8IUC3 87 aa12.46□□□□□ -0.42
LPCAT3-201ENST00000261407 SMIM20Q8N5G0 67 aa12.46□□□□□ -0.42
LPCAT3-201ENST00000261407 KCNQ1DNQ9H478 68 aa12.46□□□□□ -0.42
LPCAT3-201ENST00000261407 STAB2Q8WWQ8 2551 aa12.46□□□□□ -0.42
LPCAT3-201ENST00000261407 SERP2Q8N6R1 65 aa12.45□□□□□ -0.42
LPCAT3-201ENST00000261407 DEFB105AQ8NG35 78 aa12.45□□□□□ -0.42
LPCAT3-201ENST00000261407 CSMD3Q7Z407 3707 aa12.45□□□□□ -0.42
LPCAT3-201ENST00000261407 F8WDY8 70 aa12.44□□□□□ -0.42
LPCAT3-201ENST00000261407 H3BQ85 93 aa12.44□□□□□ -0.42
LPCAT3-201ENST00000261407 CRYGAP11844 174 aa12.43□□□□□ -0.42
LPCAT3-201ENST00000261407 SCXQ7RTU7 201 aa12.43□□□□□ -0.42
LPCAT3-201ENST00000261407 GHRHP01286 108 aa12.42□□□□□ -0.42
LPCAT3-201ENST00000261407 PDE6GP18545 87 aa12.42□□□□□ -0.42
LPCAT3-201ENST00000261407 TLX1NBP0CAT3 122 aa12.41□□□□□ -0.42
LPCAT3-201ENST00000261407 DNAH7Q8WXX0 4024 aa12.39□□□□□ -0.43
LPCAT3-201ENST00000261407 TENM2Q9NT68 2774 aa12.39□□□□□ -0.43
LPCAT3-201ENST00000261407 Q8N377 158 aa12.39□□□□□ -0.43
LPCAT3-201ENST00000261407 Q9BRP9 147 aa12.39□□□□□ -0.43
LPCAT3-201ENST00000261407 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
LPCAT3-201ENST00000261407 IGLV1-50A0A075B6I6 118 aa12.37□□□□□ -0.43
LPCAT3-201ENST00000261407 KRTAP1-5Q9BYS1 174 aa12.36□□□□□ -0.43
LPCAT3-201ENST00000261407 KRTAP4-16G5E9R7 235 aaPredicted RBP12.36□□□□□ -0.43
LPCAT3-201ENST00000261407 Q6ZRX8 168 aa12.35□□□□□ -0.43
LPCAT3-201ENST00000261407 ST20-AS1Q8NBB2 130 aa12.35□□□□□ -0.43
LPCAT3-201ENST00000261407 PLA2G2DQ9UNK4 145 aa12.35□□□□□ -0.43
LPCAT3-201ENST00000261407 C3orf84H3BNL1 204 aa12.32□□□□□ -0.44
LPCAT3-201ENST00000261407 CXCL6P80162 114 aa12.32□□□□□ -0.44
LPCAT3-201ENST00000261407 ERC2-IT1O76042 136 aa12.31□□□□□ -0.44
LPCAT3-201ENST00000261407 Q8N9L7 120 aa12.31□□□□□ -0.44
LPCAT3-201ENST00000261407 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
LPCAT3-201ENST00000261407 RMI2Q96E14 147 aa12.31□□□□□ -0.44
LPCAT3-201ENST00000261407 IGLV5-37A0A075B6J1 123 aa12.3□□□□□ -0.44
LPCAT3-201ENST00000261407 SPRR1AP35321 89 aa12.3□□□□□ -0.44
LPCAT3-201ENST00000261407 ETDCA0A1B0GVM5 59 aa12.3□□□□□ -0.44
LPCAT3-201ENST00000261407 PRYO14603 147 aa12.28□□□□□ -0.44
LPCAT3-201ENST00000261407 LOC107984640A0A0U1RRK4 108 aa12.27□□□□□ -0.44
LPCAT3-201ENST00000261407 DHRS4-AS1Q9P1J3 65 aa12.27□□□□□ -0.45
LPCAT3-201ENST00000261407 C20orf197Q8N268 126 aa12.26□□□□□ -0.45
LPCAT3-201ENST00000261407 PLECQ15149 4684 aaKnown RBP12.26□□□□□ -0.45
LPCAT3-201ENST00000261407 IGLV5-48A0A075B6I7 105 aa12.26□□□□□ -0.45
LPCAT3-201ENST00000261407 IGKV2-24A0A0C4DH68 120 aa12.26□□□□□ -0.45
LPCAT3-201ENST00000261407 A0A096LNI7 61 aa12.24□□□□□ -0.45
LPCAT3-201ENST00000261407 UBE2BP63146 152 aa12.23□□□□□ -0.45
LPCAT3-201ENST00000261407 NREPQ16612 68 aa12.23□□□□□ -0.45
LPCAT3-201ENST00000261407 SRRM2Q9UQ35 2752 aaKnown RBP12.23□□□□□ -0.45
LPCAT3-201ENST00000261407 A0A1W2PNM2 257 aa12.22□□□□□ -0.45
LPCAT3-201ENST00000261407 A0A1W2PNN7 141 aa12.22□□□□□ -0.45
LPCAT3-201ENST00000261407 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.45
LPCAT3-201ENST00000261407 BPY2O14599 106 aa12.21□□□□□ -0.45
LPCAT3-201ENST00000261407 TNP2Q05952 138 aa12.2□□□□□ -0.46
LPCAT3-201ENST00000261407 REG3GQ6UW15 175 aa12.2□□□□□ -0.46
LPCAT3-201ENST00000261407 DYNC2H1Q8NCM8 4307 aaKnown RBP12.19□□□□□ -0.46
LPCAT3-201ENST00000261407 TRAV7A0A075B6U4 112 aa12.19□□□□□ -0.46
LPCAT3-201ENST00000261407 A0A0G2JQZ4 141 aa12.19□□□□□ -0.46
LPCAT3-201ENST00000261407 PSCAO43653 123 aa12.19□□□□□ -0.46
LPCAT3-201ENST00000261407 C1orf137Q5JT78 98 aa12.18□□□□□ -0.46
LPCAT3-201ENST00000261407 IGKV4-1P06312 121 aa12.18□□□□□ -0.46
LPCAT3-201ENST00000261407 TMEM258P61165 79 aa12.18□□□□□ -0.46
LPCAT3-201ENST00000261407 APLNQ9ULZ1 77 aa12.18□□□□□ -0.46
LPCAT3-201ENST00000261407 UBE2DNLQ8IWF7 75 aa12.17□□□□□ -0.46
LPCAT3-201ENST00000261407 PRLHP81277 87 aa12.17□□□□□ -0.46
LPCAT3-201ENST00000261407 SNURFQ9Y675 71 aa12.16□□□□□ -0.46
LPCAT3-201ENST00000261407 CHTF8P0CG12 524 aa12.16□□□□□ -0.46
LPCAT3-201ENST00000261407 MDFIQ99750 246 aa12.16□□□□□ -0.46
LPCAT3-201ENST00000261407 DPH3Q96FX2 82 aa12.15□□□□□ -0.46
LPCAT3-201ENST00000261407 C16orf90A8MZG2 172 aa12.14□□□□□ -0.47
LPCAT3-201ENST00000261407 SMIM29Q86T20 159 aa12.14□□□□□ -0.47
LPCAT3-201ENST00000261407 KRTAP11-1Q8IUC1 163 aa12.13□□□□□ -0.47
LPCAT3-201ENST00000261407 BCE1O60756 84 aa12.13□□□□□ -0.47
LPCAT3-201ENST00000261407 FUSP35637 526 aaKnown RBP eCLIP12.13□□□□□ -0.47
LPCAT3-201ENST00000261407 CNBPP62633 177 aaKnown RBP12.13□□□□□ -0.47
LPCAT3-201ENST00000261407 J3KT08 172 aa12.11□□□□□ -0.47
LPCAT3-201ENST00000261407 OXTP01178 125 aa12.11□□□□□ -0.47
LPCAT3-201ENST00000261407 Q8NBF4 154 aa12.1□□□□□ -0.47
LPCAT3-201ENST00000261407 H7BZZ5 65 aa12.09□□□□□ -0.47
LPCAT3-201ENST00000261407 PHF5AQ7RTV0 110 aaKnown RBP12.09□□□□□ -0.47
LPCAT3-201ENST00000261407 HIGD2AQ9BW72 106 aa12.09□□□□□ -0.47
LPCAT3-201ENST00000261407 STARD9Q9P2P6 4700 aa12.08□□□□□ -0.48
LPCAT3-201ENST00000261407 LINC00476Q8WZB0 136 aa12.07□□□□□ -0.48
LPCAT3-201ENST00000261407 KLKP1Q107X0 134 aa12.06□□□□□ -0.48
LPCAT3-201ENST00000261407 SPRR4Q96PI1 79 aa12.06□□□□□ -0.48
LPCAT3-201ENST00000261407 SVIPQ8NHG7 77 aa12.06□□□□□ -0.48
LPCAT3-201ENST00000261407 RPS28P62857 69 aaKnown RBP12.04□□□□□ -0.48
LPCAT3-201ENST00000261407 PRKDCP78527 4128 aaKnown RBP12.03□□□□□ -0.48
LPCAT3-201ENST00000261407 IGFL1Q6UW32 110 aa12.03□□□□□ -0.48
LPCAT3-201ENST00000261407 B9D2Q9BPU9 175 aa12.03□□□□□ -0.48
LPCAT3-201ENST00000261407 LRCOL1A6NCL2 159 aa12.02□□□□□ -0.49
LPCAT3-201ENST00000261407 PANO1I0J062 215 aa12.02□□□□□ -0.49
LPCAT3-201ENST00000261407 OCR1Q9BZK8 76 aa12.01□□□□□ -0.49
LPCAT3-201ENST00000261407 F8WEM9 126 aa12□□□□□ -0.49
LPCAT3-201ENST00000261407 DSCR10P59022 87 aa12□□□□□ -0.49
LPCAT3-201ENST00000261407 DEFB116Q30KQ4 102 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms