RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 COL27A1Q8IZC6 1860 aaPredicted RBP9.53□□□□□ -0.88
ZC3H4-201ENST00000253048 ZNF462Q96JM2 2506 aa9.53□□□□□ -0.88
ZC3H4-201ENST00000253048 FN1P02751 2386 aaKnown RBP9.53□□□□□ -0.88
ZC3H4-201ENST00000253048 IGLV1-50A0A075B6I6 118 aa9.52□□□□□ -0.89
ZC3H4-201ENST00000253048 CSNK1G2-AS1Q8NCQ2 148 aa9.51□□□□□ -0.89
ZC3H4-201ENST00000253048 PCSK5Q92824 1860 aa9.51□□□□□ -0.89
ZC3H4-201ENST00000253048 PTPRBP23467 1997 aa9.5□□□□□ -0.89
ZC3H4-201ENST00000253048 MRPL34Q9BQ48 92 aaKnown RBP9.5□□□□□ -0.89
ZC3H4-201ENST00000253048 IGLV5-45A0A087WSX0 123 aa9.5□□□□□ -0.89
ZC3H4-201ENST00000253048 Q6ZQT0 140 aa9.5□□□□□ -0.89
ZC3H4-201ENST00000253048 Q6ZSA8 131 aa9.5□□□□□ -0.89
ZC3H4-201ENST00000253048 POLQO75417 2590 aa9.49□□□□□ -0.89
ZC3H4-201ENST00000253048 LINC00483Q53H64 154 aa9.49□□□□□ -0.89
ZC3H4-201ENST00000253048 UNC80Q8N2C7 3258 aa9.49□□□□□ -0.89
ZC3H4-201ENST00000253048 A0A096LNT2 108 aa9.49□□□□□ -0.89
ZC3H4-201ENST00000253048 ZNF575Q86XF7 245 aa9.49□□□□□ -0.89
ZC3H4-201ENST00000253048 C9orf163Q8N9P6 203 aa9.48□□□□□ -0.89
ZC3H4-201ENST00000253048 F8P00451 2351 aa9.47□□□□□ -0.89
ZC3H4-201ENST00000253048 PKD1L2Q7Z442 2459 aa9.47□□□□□ -0.89
ZC3H4-201ENST00000253048 A8MWP4 228 aa9.47□□□□□ -0.89
ZC3H4-201ENST00000253048 TRBV7-4A0A0J9YYF1 115 aa9.45□□□□□ -0.9
ZC3H4-201ENST00000253048 MIR22HGQ0VDD5 57 aa9.45□□□□□ -0.9
ZC3H4-201ENST00000253048 MTORP42345 2549 aa9.45□□□□□ -0.9
ZC3H4-201ENST00000253048 CDC42SE1Q9NRR8 79 aa9.45□□□□□ -0.9
ZC3H4-201ENST00000253048 A0A0D9SG42 100 aa9.43□□□□□ -0.9
ZC3H4-201ENST00000253048 PSORS1C2Q9UIG4 136 aa9.43□□□□□ -0.9
ZC3H4-201ENST00000253048 TNP2Q05952 138 aa9.43□□□□□ -0.9
ZC3H4-201ENST00000253048 IGLV7-46A0A075B6I9 117 aa9.42□□□□□ -0.9
ZC3H4-201ENST00000253048 LINC01546A6NGU7 62 aa9.42□□□□□ -0.9
ZC3H4-201ENST00000253048 CAMK2N1Q7Z7J9 78 aa9.42□□□□□ -0.9
ZC3H4-201ENST00000253048 IGLV5-48A0A075B6I7 105 aa9.42□□□□□ -0.9
ZC3H4-201ENST00000253048 C15orf56Q8N910 161 aa9.42□□□□□ -0.9
ZC3H4-201ENST00000253048 ANAPC11Q9NYG5 84 aa9.42□□□□□ -0.9
ZC3H4-201ENST00000253048 KRTAP1-3Q8IUG1 177 aa9.4□□□□□ -0.9
ZC3H4-201ENST00000253048 KCNQ1DNQ9H478 68 aa9.4□□□□□ -0.91
ZC3H4-201ENST00000253048 COA5Q86WW8 74 aa9.39□□□□□ -0.91
ZC3H4-201ENST00000253048 LOC110117498A0A087WWA1 95 aa9.39□□□□□ -0.91
ZC3H4-201ENST00000253048 CFAP54Q96N23 3096 aa9.39□□□□□ -0.91
ZC3H4-201ENST00000253048 K7EQZ3 153 aa9.38□□□□□ -0.91
ZC3H4-201ENST00000253048 PRUNE2Q8WUY3 3088 aa9.36□□□□□ -0.91
ZC3H4-201ENST00000253048 KRTAP1-1Q07627 177 aa9.36□□□□□ -0.91
ZC3H4-201ENST00000253048 CYP4F30PQ9H0H9 118 aa9.36□□□□□ -0.91
ZC3H4-201ENST00000253048 C8orf17Q9NRJ1 99 aa9.35□□□□□ -0.91
ZC3H4-201ENST00000253048 PRR34Q9NV39 138 aa9.35□□□□□ -0.91
ZC3H4-201ENST00000253048 IGFL1Q6UW32 110 aa9.35□□□□□ -0.91
ZC3H4-201ENST00000253048 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
ZC3H4-201ENST00000253048 FAM218AQ96MZ4 157 aa9.35□□□□□ -0.91
ZC3H4-201ENST00000253048 A0A1B0GVX0 72 aa9.34□□□□□ -0.91
ZC3H4-201ENST00000253048 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
ZC3H4-201ENST00000253048 TRANK1O15050 2925 aa9.34□□□□□ -0.91
ZC3H4-201ENST00000253048 TLX1NBP0CAT3 122 aa9.33□□□□□ -0.92
ZC3H4-201ENST00000253048 A0A1W2PNN7 141 aa9.32□□□□□ -0.92
ZC3H4-201ENST00000253048 ACANP16112 2415 aa9.32□□□□□ -0.92
ZC3H4-201ENST00000253048 CDH23Q9H251 3354 aa9.32□□□□□ -0.92
ZC3H4-201ENST00000253048 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
ZC3H4-201ENST00000253048 PLA2G2DQ9UNK4 145 aa9.31□□□□□ -0.92
ZC3H4-201ENST00000253048 C4orf26Q17RF5 130 aa9.31□□□□□ -0.92
ZC3H4-201ENST00000253048 LINC00612Q8N6U2 182 aa9.31□□□□□ -0.92
ZC3H4-201ENST00000253048 ERC2-IT1O76042 136 aa9.3□□□□□ -0.92
ZC3H4-201ENST00000253048 XIRP2A4UGR9 3374 aa9.3□□□□□ -0.92
ZC3H4-201ENST00000253048 SMCPP49901 116 aaPredicted RBP9.29□□□□□ -0.92
ZC3H4-201ENST00000253048 ANKRD17O75179 2603 aaKnown RBP9.29□□□□□ -0.92
ZC3H4-201ENST00000253048 A8MUN3 132 aa9.27□□□□□ -0.93
ZC3H4-201ENST00000253048 GIG44P09565 113 aaPredicted RBP9.27□□□□□ -0.93
ZC3H4-201ENST00000253048 PRR26Q8N8Z3 221 aa9.27□□□□□ -0.93
ZC3H4-201ENST00000253048 FASNP49327 2511 aaKnown RBP9.26□□□□□ -0.93
ZC3H4-201ENST00000253048 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
ZC3H4-201ENST00000253048 PRO0461Q9UI25 63 aa9.25□□□□□ -0.93
ZC3H4-201ENST00000253048 Q5VSD8 79 aa9.23□□□□□ -0.93
ZC3H4-201ENST00000253048 PRR15Q8IV56 129 aa9.23□□□□□ -0.93
ZC3H4-201ENST00000253048 TRIOO75962 3097 aa9.22□□□□□ -0.93
ZC3H4-201ENST00000253048 LCE6AA0A183 80 aa9.22□□□□□ -0.93
ZC3H4-201ENST00000253048 DNAH14Q0VDD8 3507 aa9.22□□□□□ -0.93
ZC3H4-201ENST00000253048 FAM104AQ969W3 186 aa9.21□□□□□ -0.93
ZC3H4-201ENST00000253048 RPS28P62857 69 aaKnown RBP9.19□□□□□ -0.94
ZC3H4-201ENST00000253048 HRES1P13985 223 aa9.19□□□□□ -0.94
ZC3H4-201ENST00000253048 EPG5Q9HCE0 2579 aa9.19□□□□□ -0.94
ZC3H4-201ENST00000253048 WDFY4Q6ZS81 3184 aa9.18□□□□□ -0.94
ZC3H4-201ENST00000253048 A0A0G2JQZ4 141 aa9.18□□□□□ -0.94
ZC3H4-201ENST00000253048 Q8N1X5 172 aa9.17□□□□□ -0.94
ZC3H4-201ENST00000253048 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
ZC3H4-201ENST00000253048 Q8N377 158 aa9.16□□□□□ -0.94
ZC3H4-201ENST00000253048 A0A0A0MQY5 61 aa9.15□□□□□ -0.95
ZC3H4-201ENST00000253048 Q1T7F1 81 aa9.14□□□□□ -0.95
ZC3H4-201ENST00000253048 LCA10Q71F78 164 aa9.14□□□□□ -0.95
ZC3H4-201ENST00000253048 CD164Q04900 197 aa9.12□□□□□ -0.95
ZC3H4-201ENST00000253048 MGAQ8IWI9 3026 aa9.12□□□□□ -0.95
ZC3H4-201ENST00000253048 VPS13AQ96RL7 3174 aa9.12□□□□□ -0.95
ZC3H4-201ENST00000253048 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.11□□□□□ -0.95
ZC3H4-201ENST00000253048 FAM229BQ4G0N7 80 aa9.1□□□□□ -0.95
ZC3H4-201ENST00000253048 LITAFQ99732 161 aa9.08□□□□□ -0.96
ZC3H4-201ENST00000253048 VCANP13611 3396 aa9.08□□□□□ -0.96
ZC3H4-201ENST00000253048 SZT2Q5T011 3432 aa9.08□□□□□ -0.96
ZC3H4-201ENST00000253048 CELSR3Q9NYQ7 3312 aa9.06□□□□□ -0.96
ZC3H4-201ENST00000253048 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
ZC3H4-201ENST00000253048 OXTP01178 125 aa9.04□□□□□ -0.96
ZC3H4-201ENST00000253048 LAMA1P25391 3075 aa9.03□□□□□ -0.96
ZC3H4-201ENST00000253048 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
ZC3H4-201ENST00000253048 CENPEQ02224 2701 aa9.02□□□□□ -0.97
ZC3H4-201ENST00000253048 CSAG1Q6PB30 78 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms