RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 H3BQ85 93 aa11.25□□□□□ -0.61
LRFN3-201ENST00000246529 UQCRQO14949 82 aa11.25□□□□□ -0.61
LRFN3-201ENST00000246529 KCNQ1DNQ9H478 68 aa11.25□□□□□ -0.61
LRFN3-201ENST00000246529 DNAH10Q8IVF4 4471 aa11.24□□□□□ -0.61
LRFN3-201ENST00000246529 TRBV7-4A0A0J9YYF1 115 aa11.24□□□□□ -0.61
LRFN3-201ENST00000246529 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
LRFN3-201ENST00000246529 COX7CP15954 63 aa11.24□□□□□ -0.61
LRFN3-201ENST00000246529 KRTAP7-1Q8IUC3 87 aa11.24□□□□□ -0.61
LRFN3-201ENST00000246529 STAB2Q8WWQ8 2551 aa11.24□□□□□ -0.61
LRFN3-201ENST00000246529 Q6ZVQ6 151 aa11.24□□□□□ -0.61
LRFN3-201ENST00000246529 ATP5EP2Q5VTU8 51 aa11.23□□□□□ -0.61
LRFN3-201ENST00000246529 DEFB105AQ8NG35 78 aa11.23□□□□□ -0.61
LRFN3-201ENST00000246529 HAMPP81172 84 aa11.22□□□□□ -0.61
LRFN3-201ENST00000246529 UPK3BQ9BT76 320 aa11.21□□□□□ -0.61
LRFN3-201ENST00000246529 PDE6GP18545 87 aa11.2□□□□□ -0.62
LRFN3-201ENST00000246529 LINC01547P58512 204 aaPredicted RBP11.2□□□□□ -0.62
LRFN3-201ENST00000246529 RMI2Q96E14 147 aa11.2□□□□□ -0.62
LRFN3-201ENST00000246529 KRTAP1-5Q9BYS1 174 aa11.2□□□□□ -0.62
LRFN3-201ENST00000246529 FAM19A5Q7Z5A7 132 aaPredicted RBP11.19□□□□□ -0.62
LRFN3-201ENST00000246529 GHRHP01286 108 aa11.19□□□□□ -0.62
LRFN3-201ENST00000246529 PLA2G2DQ9UNK4 145 aa11.18□□□□□ -0.62
LRFN3-201ENST00000246529 IGLV1-50A0A075B6I6 118 aa11.17□□□□□ -0.62
LRFN3-201ENST00000246529 CYSTM1Q9H1C7 97 aa11.17□□□□□ -0.62
LRFN3-201ENST00000246529 DNAH9Q9NYC9 4486 aa11.17□□□□□ -0.62
LRFN3-201ENST00000246529 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
LRFN3-201ENST00000246529 Q8N377 158 aa11.16□□□□□ -0.62
LRFN3-201ENST00000246529 Q9BRP9 147 aa11.16□□□□□ -0.62
LRFN3-201ENST00000246529 SERP2Q8N6R1 65 aa11.16□□□□□ -0.62
LRFN3-201ENST00000246529 KRTAP4-16G5E9R7 235 aaPredicted RBP11.15□□□□□ -0.62
LRFN3-201ENST00000246529 Q6ZRX8 168 aa11.14□□□□□ -0.63
LRFN3-201ENST00000246529 IGLV5-37A0A075B6J1 123 aa11.14□□□□□ -0.63
LRFN3-201ENST00000246529 ST20-AS1Q8NBB2 130 aa11.13□□□□□ -0.63
LRFN3-201ENST00000246529 ETDCA0A1B0GVM5 59 aa11.13□□□□□ -0.63
LRFN3-201ENST00000246529 MRPL55Q7Z7F7 128 aaKnown RBP11.13□□□□□ -0.63
LRFN3-201ENST00000246529 LOC107984640A0A0U1RRK4 108 aa11.12□□□□□ -0.63
LRFN3-201ENST00000246529 CRYGAP11844 174 aa11.12□□□□□ -0.63
LRFN3-201ENST00000246529 PRYO14603 147 aa11.12□□□□□ -0.63
LRFN3-201ENST00000246529 TENM2Q9NT68 2774 aa11.12□□□□□ -0.63
LRFN3-201ENST00000246529 SPRR1AP35321 89 aa11.11□□□□□ -0.63
LRFN3-201ENST00000246529 ERC2-IT1O76042 136 aa11.1□□□□□ -0.63
LRFN3-201ENST00000246529 MDFIQ99750 246 aa11.1□□□□□ -0.63
LRFN3-201ENST00000246529 DHRS4-AS1Q9P1J3 65 aa11.1□□□□□ -0.63
LRFN3-201ENST00000246529 IGKV2-24A0A0C4DH68 120 aa11.09□□□□□ -0.63
LRFN3-201ENST00000246529 J3KT08 172 aa11.09□□□□□ -0.63
LRFN3-201ENST00000246529 UBE2DNLQ8IWF7 75 aa11.09□□□□□ -0.63
LRFN3-201ENST00000246529 C3orf84H3BNL1 204 aa11.08□□□□□ -0.64
LRFN3-201ENST00000246529 A0A096LNI7 61 aa11.08□□□□□ -0.64
LRFN3-201ENST00000246529 CXCL6P80162 114 aa11.08□□□□□ -0.64
LRFN3-201ENST00000246529 PSCAO43653 123 aa11.07□□□□□ -0.64
LRFN3-201ENST00000246529 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
LRFN3-201ENST00000246529 DNAH7Q8WXX0 4024 aa11.07□□□□□ -0.64
LRFN3-201ENST00000246529 CSMD3Q7Z407 3707 aa11.07□□□□□ -0.64
LRFN3-201ENST00000246529 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.06□□□□□ -0.64
LRFN3-201ENST00000246529 UBE2BP63146 152 aa11.05□□□□□ -0.64
LRFN3-201ENST00000246529 C5orf47Q569G3 176 aa11.05□□□□□ -0.64
LRFN3-201ENST00000246529 Q8N9L7 120 aa11.05□□□□□ -0.64
LRFN3-201ENST00000246529 IGLV5-48A0A075B6I7 105 aa11.04□□□□□ -0.64
LRFN3-201ENST00000246529 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
LRFN3-201ENST00000246529 RPS28P62857 69 aaKnown RBP11.04□□□□□ -0.64
LRFN3-201ENST00000246529 REG3GQ6UW15 175 aa11.03□□□□□ -0.64
LRFN3-201ENST00000246529 PLECQ15149 4684 aaKnown RBP11.03□□□□□ -0.64
LRFN3-201ENST00000246529 NREPQ16612 68 aa11.01□□□□□ -0.65
LRFN3-201ENST00000246529 DYNC2H1Q8NCM8 4307 aaKnown RBP11.01□□□□□ -0.65
LRFN3-201ENST00000246529 C16orf90A8MZG2 172 aa11□□□□□ -0.65
LRFN3-201ENST00000246529 CNBPP62633 177 aaKnown RBP11□□□□□ -0.65
LRFN3-201ENST00000246529 A0A1W2PNM2 257 aa11□□□□□ -0.65
LRFN3-201ENST00000246529 CHTF8P0CG12 524 aa11□□□□□ -0.65
LRFN3-201ENST00000246529 TNP2Q05952 138 aa10.99□□□□□ -0.65
LRFN3-201ENST00000246529 PRLHP81277 87 aa10.99□□□□□ -0.65
LRFN3-201ENST00000246529 C1orf137Q5JT78 98 aa10.98□□□□□ -0.65
LRFN3-201ENST00000246529 C20orf197Q8N268 126 aa10.98□□□□□ -0.65
LRFN3-201ENST00000246529 B9D2Q9BPU9 175 aa10.98□□□□□ -0.65
LRFN3-201ENST00000246529 BPY2O14599 106 aa10.97□□□□□ -0.65
LRFN3-201ENST00000246529 A0A0G2JQZ4 141 aa10.96□□□□□ -0.65
LRFN3-201ENST00000246529 KRTAP11-1Q8IUC1 163 aa10.95□□□□□ -0.66
LRFN3-201ENST00000246529 TRAV7A0A075B6U4 112 aa10.95□□□□□ -0.66
LRFN3-201ENST00000246529 IGKV4-1P06312 121 aa10.95□□□□□ -0.66
LRFN3-201ENST00000246529 FUSP35637 526 aaKnown RBP eCLIP10.95□□□□□ -0.66
LRFN3-201ENST00000246529 TMEM258P61165 79 aa10.94□□□□□ -0.66
LRFN3-201ENST00000246529 SMIM29Q86T20 159 aa10.94□□□□□ -0.66
LRFN3-201ENST00000246529 PHF5AQ7RTV0 110 aaKnown RBP10.94□□□□□ -0.66
LRFN3-201ENST00000246529 DPH3Q96FX2 82 aa10.93□□□□□ -0.66
LRFN3-201ENST00000246529 HIGD2AQ9BW72 106 aa10.92□□□□□ -0.66
LRFN3-201ENST00000246529 SRRM2Q9UQ35 2752 aaKnown RBP10.92□□□□□ -0.66
LRFN3-201ENST00000246529 Q8NBF4 154 aa10.92□□□□□ -0.66
LRFN3-201ENST00000246529 BCE1O60756 84 aa10.91□□□□□ -0.66
LRFN3-201ENST00000246529 NBDYA0A0U1RRE5 68 aa10.9□□□□□ -0.67
LRFN3-201ENST00000246529 LRCOL1A6NCL2 159 aa10.9□□□□□ -0.67
LRFN3-201ENST00000246529 LINC00476Q8WZB0 136 aa10.89□□□□□ -0.67
LRFN3-201ENST00000246529 STARD9Q9P2P6 4700 aa10.89□□□□□ -0.67
LRFN3-201ENST00000246529 C14orf177Q52M58 125 aa10.89□□□□□ -0.67
LRFN3-201ENST00000246529 SNURFQ9Y675 71 aa10.89□□□□□ -0.67
LRFN3-201ENST00000246529 PANO1I0J062 215 aa10.87□□□□□ -0.67
LRFN3-201ENST00000246529 SPRR4Q96PI1 79 aa10.86□□□□□ -0.67
LRFN3-201ENST00000246529 PRKDCP78527 4128 aaKnown RBP10.86□□□□□ -0.67
LRFN3-201ENST00000246529 C9orf163Q8N9P6 203 aa10.86□□□□□ -0.67
LRFN3-201ENST00000246529 F8WEM9 126 aa10.85□□□□□ -0.67
LRFN3-201ENST00000246529 Q6ZRN7 208 aaPredicted RBP10.85□□□□□ -0.67
LRFN3-201ENST00000246529 NUPR2A6NF83 97 aa10.84□□□□□ -0.67
LRFN3-201ENST00000246529 OXTP01178 125 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms