RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 COL7A1Q02388 2944 aa11.04□□□□□ -0.64
SSPN-201ENST00000242729 CRYGAP11844 174 aa11.03□□□□□ -0.64
SSPN-201ENST00000242729 LOC110117498A0A087WWA1 95 aa11.02□□□□□ -0.64
SSPN-201ENST00000242729 TRAV10A0A0B4J240 114 aa11.02□□□□□ -0.65
SSPN-201ENST00000242729 NKAPP1Q8N9T2 125 aa11.02□□□□□ -0.65
SSPN-201ENST00000242729 DNAH10Q8IVF4 4471 aa11.02□□□□□ -0.65
SSPN-201ENST00000242729 C20orf197Q8N268 126 aa11.01□□□□□ -0.65
SSPN-201ENST00000242729 C3orf84H3BNL1 204 aa11□□□□□ -0.65
SSPN-201ENST00000242729 LINC01556Q5JQF7 62 aa11□□□□□ -0.65
SSPN-201ENST00000242729 LINC00528Q8N1L1 170 aa11□□□□□ -0.65
SSPN-201ENST00000242729 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
SSPN-201ENST00000242729 H3BNG1 76 aa10.99□□□□□ -0.65
SSPN-201ENST00000242729 LINC00588Q9Y4M8 146 aa10.99□□□□□ -0.65
SSPN-201ENST00000242729 ATP5EP2Q5VTU8 51 aa10.97□□□□□ -0.65
SSPN-201ENST00000242729 TRBV7-4A0A0J9YYF1 115 aa10.96□□□□□ -0.65
SSPN-201ENST00000242729 FAM19A5Q7Z5A7 132 aaPredicted RBP10.95□□□□□ -0.66
SSPN-201ENST00000242729 SNURFQ9Y675 71 aa10.95□□□□□ -0.66
SSPN-201ENST00000242729 ST20-AS1Q8NBB2 130 aa10.94□□□□□ -0.66
SSPN-201ENST00000242729 HUWE1Q7Z6Z7 4374 aaKnown RBP10.92□□□□□ -0.66
SSPN-201ENST00000242729 DNAH3Q8TD57 4116 aa10.92□□□□□ -0.66
SSPN-201ENST00000242729 A0A0G2JQZ4 141 aa10.91□□□□□ -0.66
SSPN-201ENST00000242729 A0A1W2PNN7 141 aa10.91□□□□□ -0.66
SSPN-201ENST00000242729 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
SSPN-201ENST00000242729 Q8N377 158 aa10.9□□□□□ -0.66
SSPN-201ENST00000242729 BPY2O14599 106 aa10.9□□□□□ -0.66
SSPN-201ENST00000242729 KRTAP7-1Q8IUC3 87 aa10.89□□□□□ -0.67
SSPN-201ENST00000242729 TM2D3Q9BRN9 247 aa10.89□□□□□ -0.67
SSPN-201ENST00000242729 Q9BRP9 147 aa10.88□□□□□ -0.67
SSPN-201ENST00000242729 OXTP01178 125 aa10.88□□□□□ -0.67
SSPN-201ENST00000242729 PDE6GP18545 87 aa10.88□□□□□ -0.67
SSPN-201ENST00000242729 IGKV2-24A0A0C4DH68 120 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 ERC2-IT1O76042 136 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 TRBV7-6A0A0J9YX20 115 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 RMI2Q96E14 147 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 J3KT08 172 aa10.86□□□□□ -0.67
SSPN-201ENST00000242729 ETDCA0A1B0GVM5 59 aa10.85□□□□□ -0.67
SSPN-201ENST00000242729 NREPQ16612 68 aa10.85□□□□□ -0.67
SSPN-201ENST00000242729 DNAH1Q9P2D7 4330 aa10.84□□□□□ -0.67
SSPN-201ENST00000242729 K7EIL1 84 aa10.84□□□□□ -0.67
SSPN-201ENST00000242729 TMEM258P61165 79 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 UBE2BP63146 152 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 DNAH9Q9NYC9 4486 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 CXCL6P80162 114 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 DNAH7Q8WXX0 4024 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.82□□□□□ -0.68
SSPN-201ENST00000242729 Q6ZRX8 168 aa10.82□□□□□ -0.68
SSPN-201ENST00000242729 IGLV1-50A0A075B6I6 118 aa10.82□□□□□ -0.68
SSPN-201ENST00000242729 H3BQ85 93 aa10.81□□□□□ -0.68
SSPN-201ENST00000242729 KRTAP1-5Q9BYS1 174 aa10.81□□□□□ -0.68
SSPN-201ENST00000242729 TRAV7A0A075B6U4 112 aa10.8□□□□□ -0.68
SSPN-201ENST00000242729 MRPL55Q7Z7F7 128 aaKnown RBP10.79□□□□□ -0.68
SSPN-201ENST00000242729 C5orf47Q569G3 176 aa10.78□□□□□ -0.68
SSPN-201ENST00000242729 PRLHP81277 87 aa10.77□□□□□ -0.68
SSPN-201ENST00000242729 A0A1W2PNM2 257 aa10.77□□□□□ -0.69
SSPN-201ENST00000242729 DEFB116Q30KQ4 102 aa10.77□□□□□ -0.69
SSPN-201ENST00000242729 KRTAP4-16G5E9R7 235 aaPredicted RBP10.76□□□□□ -0.69
SSPN-201ENST00000242729 IGKV4-1P06312 121 aa10.76□□□□□ -0.69
SSPN-201ENST00000242729 C1orf137Q5JT78 98 aa10.76□□□□□ -0.69
SSPN-201ENST00000242729 F8WEM9 126 aa10.76□□□□□ -0.69
SSPN-201ENST00000242729 H7BZZ5 65 aa10.76□□□□□ -0.69
SSPN-201ENST00000242729 A0A096LNI7 61 aa10.74□□□□□ -0.69
SSPN-201ENST00000242729 PSCAO43653 123 aa10.74□□□□□ -0.69
SSPN-201ENST00000242729 CHTF8P0CG12 524 aa10.74□□□□□ -0.69
SSPN-201ENST00000242729 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
SSPN-201ENST00000242729 DHRS4-AS1Q9P1J3 65 aa10.73□□□□□ -0.69
SSPN-201ENST00000242729 HIGD2AQ9BW72 106 aa10.73□□□□□ -0.69
SSPN-201ENST00000242729 FUSP35637 526 aaKnown RBP eCLIP10.72□□□□□ -0.69
SSPN-201ENST00000242729 FAM236DA0A1B0GTK5 79 aa10.72□□□□□ -0.69
SSPN-201ENST00000242729 FAM236CP0DP71 79 aa10.72□□□□□ -0.69
SSPN-201ENST00000242729 IGLV5-48A0A075B6I7 105 aa10.71□□□□□ -0.69
SSPN-201ENST00000242729 PRYO14603 147 aa10.71□□□□□ -0.69
SSPN-201ENST00000242729 C4orf26Q17RF5 130 aa10.71□□□□□ -0.7
SSPN-201ENST00000242729 REG3GQ6UW15 175 aa10.7□□□□□ -0.7
SSPN-201ENST00000242729 FAM30AQ9NZY2 134 aa10.7□□□□□ -0.7
SSPN-201ENST00000242729 F8WDY8 70 aa10.7□□□□□ -0.7
SSPN-201ENST00000242729 UBE2DNLQ8IWF7 75 aa10.7□□□□□ -0.7
SSPN-201ENST00000242729 SPRR1AP35321 89 aa10.69□□□□□ -0.7
SSPN-201ENST00000242729 SMIM29Q86T20 159 aa10.68□□□□□ -0.7
SSPN-201ENST00000242729 RPS28P62857 69 aaKnown RBP10.67□□□□□ -0.7
SSPN-201ENST00000242729 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
SSPN-201ENST00000242729 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
SSPN-201ENST00000242729 KLKP1Q107X0 134 aa10.65□□□□□ -0.7
SSPN-201ENST00000242729 TMEM254Q8TBM7 123 aa10.65□□□□□ -0.7
SSPN-201ENST00000242729 PHF5AQ7RTV0 110 aaKnown RBP10.65□□□□□ -0.7
SSPN-201ENST00000242729 LINC00476Q8WZB0 136 aa10.65□□□□□ -0.71
SSPN-201ENST00000242729 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
SSPN-201ENST00000242729 TNP2Q05952 138 aa10.64□□□□□ -0.71
SSPN-201ENST00000242729 Q8NBF4 154 aa10.64□□□□□ -0.71
SSPN-201ENST00000242729 HRCT1Q6UXD1 115 aa10.64□□□□□ -0.71
SSPN-201ENST00000242729 PLECQ15149 4684 aaKnown RBP10.63□□□□□ -0.71
SSPN-201ENST00000242729 K7EQZ3 153 aa10.63□□□□□ -0.71
SSPN-201ENST00000242729 OCR1Q9BZK8 76 aa10.61□□□□□ -0.71
SSPN-201ENST00000242729 BCE1O60756 84 aa10.59□□□□□ -0.71
SSPN-201ENST00000242729 DSCR10P59022 87 aa10.59□□□□□ -0.71
SSPN-201ENST00000242729 Q5XG85 94 aa10.59□□□□□ -0.71
SSPN-201ENST00000242729 IGFL1Q6UW32 110 aa10.59□□□□□ -0.71
SSPN-201ENST00000242729 RPL37AP61513 92 aaKnown RBP10.58□□□□□ -0.72
SSPN-201ENST00000242729 A0A087WSZ3 146 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms