RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 FLNBO75369 2602 aaKnown RBP9.15□□□□□ -0.94
HCFC2-201ENST00000229330 CSNK1G2-AS1Q8NCQ2 148 aa9.15□□□□□ -0.94
HCFC2-201ENST00000229330 IGFL1Q6UW32 110 aa9.14□□□□□ -0.95
HCFC2-201ENST00000229330 A0A096LNT2 108 aa9.14□□□□□ -0.95
HCFC2-201ENST00000229330 PHF5AQ7RTV0 110 aaKnown RBP9.14□□□□□ -0.95
HCFC2-201ENST00000229330 Q8NAQ8 132 aa9.14□□□□□ -0.95
HCFC2-201ENST00000229330 FAM168BA1KXE4 195 aa9.14□□□□□ -0.95
HCFC2-201ENST00000229330 OCR1Q9BZK8 76 aa9.13□□□□□ -0.95
HCFC2-201ENST00000229330 HECTD1Q9ULT8 2610 aa9.13□□□□□ -0.95
HCFC2-201ENST00000229330 IGLV5-52A0A0A0MRZ9 124 aa9.13□□□□□ -0.95
HCFC2-201ENST00000229330 BRCA2P51587 3418 aa9.12□□□□□ -0.95
HCFC2-201ENST00000229330 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
HCFC2-201ENST00000229330 SPANXA2-OT1Q8N9U9 137 aa9.12□□□□□ -0.95
HCFC2-201ENST00000229330 UQCR11O14957 56 aa9.11□□□□□ -0.95
HCFC2-201ENST00000229330 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
HCFC2-201ENST00000229330 C16orf90A8MZG2 172 aa9.11□□□□□ -0.95
HCFC2-201ENST00000229330 MRPL34Q9BQ48 92 aaKnown RBP9.11□□□□□ -0.95
HCFC2-201ENST00000229330 PRR34Q9NV39 138 aa9.11□□□□□ -0.95
HCFC2-201ENST00000229330 FP248Q71RG6 208 aaPredicted RBP9.1□□□□□ -0.95
HCFC2-201ENST00000229330 CDC42SE1Q9NRR8 79 aa9.09□□□□□ -0.95
HCFC2-201ENST00000229330 A0A1W2PNM2 257 aa9.08□□□□□ -0.96
HCFC2-201ENST00000229330 MDFIQ99750 246 aa9.08□□□□□ -0.96
HCFC2-201ENST00000229330 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
HCFC2-201ENST00000229330 LINC00313P59037 77 aa9.06□□□□□ -0.96
HCFC2-201ENST00000229330 MIR22HGQ0VDD5 57 aa9.06□□□□□ -0.96
HCFC2-201ENST00000229330 C15orf56Q8N910 161 aa9.05□□□□□ -0.96
HCFC2-201ENST00000229330 C1orf134Q5TEV5 83 aa9.05□□□□□ -0.96
HCFC2-201ENST00000229330 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
HCFC2-201ENST00000229330 A0A0G2JQZ4 141 aa9.04□□□□□ -0.96
HCFC2-201ENST00000229330 A0A1W2PNN7 141 aa9.04□□□□□ -0.96
HCFC2-201ENST00000229330 FAM229BQ4G0N7 80 aa9.04□□□□□ -0.96
HCFC2-201ENST00000229330 LINC00612Q8N6U2 182 aa9.03□□□□□ -0.96
HCFC2-201ENST00000229330 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
HCFC2-201ENST00000229330 OXTP01178 125 aa9.03□□□□□ -0.96
HCFC2-201ENST00000229330 IGLV5-48A0A075B6I7 105 aa9.02□□□□□ -0.97
HCFC2-201ENST00000229330 DNAH10OSP0CZ25 163 aa9.02□□□□□ -0.97
HCFC2-201ENST00000229330 LINC00588Q9Y4M8 146 aa9.02□□□□□ -0.97
HCFC2-201ENST00000229330 SPINT4Q6UDR6 99 aa9□□□□□ -0.97
HCFC2-201ENST00000229330 SPACA4Q8TDM5 124 aa9□□□□□ -0.97
HCFC2-201ENST00000229330 RBM12B-AS1Q9P1G2 102 aa9□□□□□ -0.97
HCFC2-201ENST00000229330 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
HCFC2-201ENST00000229330 CHTF8P0CG12 524 aa9□□□□□ -0.97
HCFC2-201ENST00000229330 C19orf73Q9NVV2 129 aa8.98□□□□□ -0.97
HCFC2-201ENST00000229330 A0A1B0GVX0 72 aa8.98□□□□□ -0.97
HCFC2-201ENST00000229330 PRUNE2Q8WUY3 3088 aa8.98□□□□□ -0.97
HCFC2-201ENST00000229330 TLX1NBP0CAT3 122 aa8.97□□□□□ -0.97
HCFC2-201ENST00000229330 KRTAP1-3Q8IUG1 177 aa8.97□□□□□ -0.97
HCFC2-201ENST00000229330 SSBP3-AS1Q7Z2R9 100 aa8.95□□□□□ -0.98
HCFC2-201ENST00000229330 KRTAP10-3P60369 221 aa8.95□□□□□ -0.98
HCFC2-201ENST00000229330 DSCR10P59022 87 aa8.94□□□□□ -0.98
HCFC2-201ENST00000229330 FLNAP21333 2647 aaKnown RBP8.94□□□□□ -0.98
HCFC2-201ENST00000229330 Q75L30 129 aa8.93□□□□□ -0.98
HCFC2-201ENST00000229330 LAMA2P24043 3122 aaKnown RBP8.93□□□□□ -0.98
HCFC2-201ENST00000229330 ZNF292O60281 2723 aa8.92□□□□□ -0.98
HCFC2-201ENST00000229330 UNC80Q8N2C7 3258 aa8.92□□□□□ -0.98
HCFC2-201ENST00000229330 A0A0C4DFX4 3053 aa8.91□□□□□ -0.98
HCFC2-201ENST00000229330 CENPEQ02224 2701 aa8.91□□□□□ -0.98
HCFC2-201ENST00000229330 MGAQ8IWI9 3026 aa8.91□□□□□ -0.98
HCFC2-201ENST00000229330 KRTAP10-11P60412 298 aa8.9□□□□□ -0.98
HCFC2-201ENST00000229330 SPRR4Q96PI1 79 aa8.9□□□□□ -0.98
HCFC2-201ENST00000229330 ITPR3Q14573 2671 aa8.9□□□□□ -0.99
HCFC2-201ENST00000229330 KRTAP1-1Q07627 177 aa8.89□□□□□ -0.99
HCFC2-201ENST00000229330 Q8N9P0 234 aaPredicted RBP8.89□□□□□ -0.99
HCFC2-201ENST00000229330 USP24Q9UPU5 2620 aa8.88□□□□□ -0.99
HCFC2-201ENST00000229330 HELZ2Q9BYK8 2649 aaKnown RBP8.88□□□□□ -0.99
HCFC2-201ENST00000229330 IGLV7-46A0A075B6I9 117 aa8.87□□□□□ -0.99
HCFC2-201ENST00000229330 NBDYA0A0U1RRE5 68 aa8.87□□□□□ -0.99
HCFC2-201ENST00000229330 CFAP54Q96N23 3096 aa8.87□□□□□ -0.99
HCFC2-201ENST00000229330 Q96NJ1 140 aa8.86□□□□□ -0.99
HCFC2-201ENST00000229330 MGAM2Q2M2H8 2515 aa8.86□□□□□ -0.99
HCFC2-201ENST00000229330 CFAP46Q8IYW2 2715 aa8.85□□□□□ -0.99
HCFC2-201ENST00000229330 RTL8CO15255 209 aa8.85□□□□□ -0.99
HCFC2-201ENST00000229330 K7EIL1 84 aa8.84□□□□□ -0.99
HCFC2-201ENST00000229330 Q5VV11 94 aa8.84□□□□□ -0.99
HCFC2-201ENST00000229330 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
HCFC2-201ENST00000229330 WDFY4Q6ZS81 3184 aa8.84□□□□□ -0.99
HCFC2-201ENST00000229330 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
HCFC2-201ENST00000229330 Q8NDZ9 215 aa8.82□□□□□ -1
HCFC2-201ENST00000229330 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
HCFC2-201ENST00000229330 CDH23Q9H251 3354 aa8.81□□□□□ -1
HCFC2-201ENST00000229330 LINC01554Q52M75 96 aa8.79□□□□□ -1
HCFC2-201ENST00000229330 XIRP2A4UGR9 3374 aa8.79□□□□□ -1
HCFC2-201ENST00000229330 C9orf163Q8N9P6 203 aa8.79□□□□□ -1
HCFC2-201ENST00000229330 TRIOO75962 3097 aa8.78□□□□□ -1
HCFC2-201ENST00000229330 ATRQ13535 2644 aa8.78□□□□□ -1
HCFC2-201ENST00000229330 TYMSOSQ8TAI1 123 aa8.78□□□□□ -1
HCFC2-201ENST00000229330 CR1P17927 2039 aa8.77□□□□□ -1.01
HCFC2-201ENST00000229330 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
HCFC2-201ENST00000229330 CASC10Q5T4H9 136 aa8.76□□□□□ -1.01
HCFC2-201ENST00000229330 ZNF861PO60384 105 aa8.75□□□□□ -1.01
HCFC2-201ENST00000229330 CRIPTQ9P021 101 aa8.75□□□□□ -1.01
HCFC2-201ENST00000229330 H3BS24 57 aa8.74□□□□□ -1.01
HCFC2-201ENST00000229330 PRAC1Q96KF2 57 aa8.74□□□□□ -1.01
HCFC2-201ENST00000229330 AKAP13Q12802 2813 aa8.73□□□□□ -1.01
HCFC2-201ENST00000229330 WWC2-AS2Q96NR7 200 aa8.73□□□□□ -1.01
HCFC2-201ENST00000229330 MAST4O15021 2626 aa8.71□□□□□ -1.01
HCFC2-201ENST00000229330 ANAPC11Q9NYG5 84 aa8.71□□□□□ -1.01
HCFC2-201ENST00000229330 MMP24-AS1A0A0U1RRL7 71 aa8.68□□□□□ -1.02
HCFC2-201ENST00000229330 APLNQ9ULZ1 77 aa8.68□□□□□ -1.02
HCFC2-201ENST00000229330 DSPP15924 2871 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms