RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 Q8NBF4 154 aa7.77□□□□□ -1.17
NOD1-201ENST00000222823 C1orf64Q8NEQ6 169 aa7.77□□□□□ -1.17
NOD1-201ENST00000222823 NBDYA0A0U1RRE5 68 aa7.76□□□□□ -1.17
NOD1-201ENST00000222823 Q6ZQT0 140 aa7.76□□□□□ -1.17
NOD1-201ENST00000222823 PHF5AQ7RTV0 110 aaKnown RBP7.76□□□□□ -1.17
NOD1-201ENST00000222823 GVQW2A0A096LPI5 108 aaPredicted RBP7.76□□□□□ -1.17
NOD1-201ENST00000222823 SPINK1P00995 79 aa7.76□□□□□ -1.17
NOD1-201ENST00000222823 ASPMQ8IZT6 3477 aa7.76□□□□□ -1.17
NOD1-201ENST00000222823 PSPHP1O15172 72 aa7.75□□□□□ -1.17
NOD1-201ENST00000222823 TACC2O95359 2948 aa7.75□□□□□ -1.17
NOD1-201ENST00000222823 C16orf90A8MZG2 172 aa7.75□□□□□ -1.17
NOD1-201ENST00000222823 Q6ZRP5 223 aa7.75□□□□□ -1.17
NOD1-201ENST00000222823 LINC00476Q8WZB0 136 aa7.75□□□□□ -1.17
NOD1-201ENST00000222823 DNAH10OSP0CZ25 163 aa7.74□□□□□ -1.17
NOD1-201ENST00000222823 EIF4EBP3O60516 100 aaPredicted RBP7.74□□□□□ -1.17
NOD1-201ENST00000222823 VPREB1P12018 145 aa7.74□□□□□ -1.17
NOD1-201ENST00000222823 LOC110117498A0A087WWA1 95 aa7.73□□□□□ -1.17
NOD1-201ENST00000222823 BCE1O60756 84 aa7.73□□□□□ -1.17
NOD1-201ENST00000222823 ST20-AS1Q8NBB2 130 aa7.73□□□□□ -1.17
NOD1-201ENST00000222823 TEP1Q99973 2627 aaKnown RBP7.73□□□□□ -1.17
NOD1-201ENST00000222823 SPACA4Q8TDM5 124 aa7.73□□□□□ -1.17
NOD1-201ENST00000222823 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
NOD1-201ENST00000222823 GIG44P09565 113 aaPredicted RBP7.73□□□□□ -1.17
NOD1-201ENST00000222823 PMAIP1Q13794 54 aa7.73□□□□□ -1.17
NOD1-201ENST00000222823 C1orf195Q5TG92 126 aa7.73□□□□□ -1.17
NOD1-201ENST00000222823 MUC3AQ02505 3323 aa7.72□□□□□ -1.17
NOD1-201ENST00000222823 CRYGAP11844 174 aa7.72□□□□□ -1.17
NOD1-201ENST00000222823 CHD6Q8TD26 2715 aa7.72□□□□□ -1.17
NOD1-201ENST00000222823 IGKV2D-30A0A075B6S6 120 aa7.72□□□□□ -1.17
NOD1-201ENST00000222823 IGKV2-30P06310 120 aa7.72□□□□□ -1.17
NOD1-201ENST00000222823 DMDP11532 3685 aa7.72□□□□□ -1.17
NOD1-201ENST00000222823 ATMQ13315 3056 aa7.72□□□□□ -1.17
NOD1-201ENST00000222823 CHTF8P0CG12 524 aa7.72□□□□□ -1.17
NOD1-201ENST00000222823 C19orf73Q9NVV2 129 aa7.71□□□□□ -1.17
NOD1-201ENST00000222823 IGLV6-57P01721 117 aa7.71□□□□□ -1.18
NOD1-201ENST00000222823 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.18
NOD1-201ENST00000222823 RTL8CO15255 209 aa7.7□□□□□ -1.18
NOD1-201ENST00000222823 TP53AIP1Q9HCN2 124 aa7.7□□□□□ -1.18
NOD1-201ENST00000222823 DMXL1Q9Y485 3027 aa7.7□□□□□ -1.18
NOD1-201ENST00000222823 FAM104AQ969W3 186 aa7.69□□□□□ -1.18
NOD1-201ENST00000222823 DCHS1Q96JQ0 3298 aa7.69□□□□□ -1.18
NOD1-201ENST00000222823 LRBAP50851 2863 aa7.69□□□□□ -1.18
NOD1-201ENST00000222823 PRR34Q9NV39 138 aa7.68□□□□□ -1.18
NOD1-201ENST00000222823 TEX15Q9BXT5 2789 aa7.66□□□□□ -1.18
NOD1-201ENST00000222823 FAM168BA1KXE4 195 aa7.66□□□□□ -1.18
NOD1-201ENST00000222823 SERTAD4-AS1Q5TG53 156 aa7.65□□□□□ -1.18
NOD1-201ENST00000222823 LINC01600Q96MT4 127 aa7.65□□□□□ -1.18
NOD1-201ENST00000222823 ZZEF1O43149 2961 aa7.65□□□□□ -1.18
NOD1-201ENST00000222823 ZFHX4Q86UP3 3567 aa7.65□□□□□ -1.18
NOD1-201ENST00000222823 TM2D3Q9BRN9 247 aa7.65□□□□□ -1.19
NOD1-201ENST00000222823 TRBV7-4A0A0J9YYF1 115 aa7.64□□□□□ -1.19
NOD1-201ENST00000222823 K7EIL1 84 aa7.64□□□□□ -1.19
NOD1-201ENST00000222823 LINC00612Q8N6U2 182 aa7.64□□□□□ -1.19
NOD1-201ENST00000222823 CR1P17927 2039 aa7.64□□□□□ -1.19
NOD1-201ENST00000222823 KCNQ1DNQ9H478 68 aa7.64□□□□□ -1.19
NOD1-201ENST00000222823 KRTAP10-11P60412 298 aa7.64□□□□□ -1.19
NOD1-201ENST00000222823 LINC00528Q8N1L1 170 aa7.64□□□□□ -1.19
NOD1-201ENST00000222823 TRAV22A0A0B4J277 110 aa7.63□□□□□ -1.19
NOD1-201ENST00000222823 IGSF10Q6WRI0 2623 aa7.63□□□□□ -1.19
NOD1-201ENST00000222823 IGLV1-50A0A075B6I6 118 aa7.62□□□□□ -1.19
NOD1-201ENST00000222823 KRTAP10-3P60369 221 aa7.62□□□□□ -1.19
NOD1-201ENST00000222823 RPL37AP61513 92 aaKnown RBP7.62□□□□□ -1.19
NOD1-201ENST00000222823 WWC2-AS2Q96NR7 200 aa7.62□□□□□ -1.19
NOD1-201ENST00000222823 H3BPC8 53 aa7.61□□□□□ -1.19
NOD1-201ENST00000222823 TYMSOSQ8TAI1 123 aa7.61□□□□□ -1.19
NOD1-201ENST00000222823 COL6A5A8TX70 2615 aa7.61□□□□□ -1.19
NOD1-201ENST00000222823 KRTAP1-1Q07627 177 aa7.6□□□□□ -1.19
NOD1-201ENST00000222823 C15orf56Q8N910 161 aa7.6□□□□□ -1.19
NOD1-201ENST00000222823 ACYP2P14621 99 aa7.6□□□□□ -1.19
NOD1-201ENST00000222823 LINC00313P59037 77 aa7.59□□□□□ -1.19
NOD1-201ENST00000222823 C7orf65Q6ZTY9 151 aa7.59□□□□□ -1.19
NOD1-201ENST00000222823 NBEAL1Q6ZS30 2694 aa7.59□□□□□ -1.19
NOD1-201ENST00000222823 LAMA5O15230 3695 aa7.59□□□□□ -1.19
NOD1-201ENST00000222823 NOTCH1P46531 2555 aa7.59□□□□□ -1.19
NOD1-201ENST00000222823 RPS28P62857 69 aaKnown RBP7.59□□□□□ -1.19
NOD1-201ENST00000222823 FLNCQ14315 2725 aa7.58□□□□□ -1.2
NOD1-201ENST00000222823 FAM229AH3BQW9 127 aa7.58□□□□□ -1.2
NOD1-201ENST00000222823 A0A1B0GU69 56 aa7.56□□□□□ -1.2
NOD1-201ENST00000222823 K7EQZ3 153 aa7.56□□□□□ -1.2
NOD1-201ENST00000222823 A8MWP4 228 aa7.56□□□□□ -1.2
NOD1-201ENST00000222823 UNC79Q9P2D8 2635 aa7.55□□□□□ -1.2
NOD1-201ENST00000222823 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
NOD1-201ENST00000222823 SPAG11AQ6PDA7 123 aa7.55□□□□□ -1.2
NOD1-201ENST00000222823 HRNRQ86YZ3 2850 aaPredicted RBP7.54□□□□□ -1.2
NOD1-201ENST00000222823 Q8N377 158 aa7.54□□□□□ -1.2
NOD1-201ENST00000222823 C9orf163Q8N9P6 203 aa7.54□□□□□ -1.2
NOD1-201ENST00000222823 PLA2G1BP04054 148 aaKnown RBP7.54□□□□□ -1.2
NOD1-201ENST00000222823 IGFL1Q6UW32 110 aa7.53□□□□□ -1.2
NOD1-201ENST00000222823 COL12A1Q99715 3063 aa7.53□□□□□ -1.2
NOD1-201ENST00000222823 PRO0628Q9UI54 55 aa7.52□□□□□ -1.21
NOD1-201ENST00000222823 TLX1NBP0CAT3 122 aa7.52□□□□□ -1.21
NOD1-201ENST00000222823 MRPL34Q9BQ48 92 aaKnown RBP7.51□□□□□ -1.21
NOD1-201ENST00000222823 LOC101927531A0A1B0GV80 90 aa7.5□□□□□ -1.21
NOD1-201ENST00000222823 C4orf26Q17RF5 130 aa7.5□□□□□ -1.21
NOD1-201ENST00000222823 C8orf87E5RJ46 101 aa7.5□□□□□ -1.21
NOD1-201ENST00000222823 Q96NJ1 140 aa7.5□□□□□ -1.21
NOD1-201ENST00000222823 A0A087WTM6 91 aa7.5□□□□□ -1.21
NOD1-201ENST00000222823 ZNF861PO60384 105 aa7.5□□□□□ -1.21
NOD1-201ENST00000222823 ERC2-IT1O76042 136 aa7.49□□□□□ -1.21
NOD1-201ENST00000222823 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms