RNA–Protein interactions for RNA: ENST00000222753.5

HOXA13-201, Transcript of homeobox A13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA13, Length 5,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-201ENST00000222753 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
HOXA13-201ENST00000222753 A8MWP4 228 aa12.39□□□□□ -0.43
HOXA13-201ENST00000222753 SPINK1P00995 79 aa12.39□□□□□ -0.43
HOXA13-201ENST00000222753 VCANP13611 3396 aa12.38□□□□□ -0.43
HOXA13-201ENST00000222753 A8MUN3 132 aa12.38□□□□□ -0.43
HOXA13-201ENST00000222753 EPM2AB3EWF7 344 aa12.38□□□□□ -0.43
HOXA13-201ENST00000222753 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
HOXA13-201ENST00000222753 LINC00612Q8N6U2 182 aa12.37□□□□□ -0.43
HOXA13-201ENST00000222753 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
HOXA13-201ENST00000222753 RPL37AP61513 92 aaKnown RBP12.36□□□□□ -0.43
HOXA13-201ENST00000222753 KRTAP24-1Q3LI83 254 aa12.36□□□□□ -0.43
HOXA13-201ENST00000222753 DNAH10OSP0CZ25 163 aa12.35□□□□□ -0.43
HOXA13-201ENST00000222753 GIG44P09565 113 aaPredicted RBP12.35□□□□□ -0.43
HOXA13-201ENST00000222753 LAMA1P25391 3075 aa12.34□□□□□ -0.43
HOXA13-201ENST00000222753 IGKV2D-30A0A075B6S6 120 aa12.33□□□□□ -0.44
HOXA13-201ENST00000222753 IGKV2-30P06310 120 aa12.33□□□□□ -0.44
HOXA13-201ENST00000222753 SERTAD4-AS1Q5TG53 156 aa12.33□□□□□ -0.44
HOXA13-201ENST00000222753 PHF5AQ7RTV0 110 aaKnown RBP12.33□□□□□ -0.44
HOXA13-201ENST00000222753 LOC101927531A0A1B0GV80 90 aa12.33□□□□□ -0.44
HOXA13-201ENST00000222753 Q8N377 158 aa12.32□□□□□ -0.44
HOXA13-201ENST00000222753 COA5Q86WW8 74 aa12.31□□□□□ -0.44
HOXA13-201ENST00000222753 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
HOXA13-201ENST00000222753 LINC00588Q9Y4M8 146 aa12.3□□□□□ -0.44
HOXA13-201ENST00000222753 DSPP15924 2871 aaKnown RBP12.29□□□□□ -0.44
HOXA13-201ENST00000222753 C7orf65Q6ZTY9 151 aa12.29□□□□□ -0.44
HOXA13-201ENST00000222753 SZT2Q5T011 3432 aa12.28□□□□□ -0.44
HOXA13-201ENST00000222753 NBEAQ8NFP9 2946 aa12.28□□□□□ -0.44
HOXA13-201ENST00000222753 MDFIQ99750 246 aa12.27□□□□□ -0.44
HOXA13-201ENST00000222753 PRR15Q8IV56 129 aa12.27□□□□□ -0.45
HOXA13-201ENST00000222753 FRYQ5TBA9 3013 aa12.27□□□□□ -0.45
HOXA13-201ENST00000222753 IGFL1Q6UW32 110 aa12.27□□□□□ -0.45
HOXA13-201ENST00000222753 FAM168BA1KXE4 195 aa12.26□□□□□ -0.45
HOXA13-201ENST00000222753 C8orf87E5RJ46 101 aa12.26□□□□□ -0.45
HOXA13-201ENST00000222753 C15orf56Q8N910 161 aa12.26□□□□□ -0.45
HOXA13-201ENST00000222753 A0A096LNT2 108 aa12.25□□□□□ -0.45
HOXA13-201ENST00000222753 PLA2G2DQ9UNK4 145 aa12.25□□□□□ -0.45
HOXA13-201ENST00000222753 WIPF1O43516 503 aa12.25□□□□□ -0.45
HOXA13-201ENST00000222753 ATP11AUNQ6ZP68 121 aa12.25□□□□□ -0.45
HOXA13-201ENST00000222753 MRPL34Q9BQ48 92 aaKnown RBP12.24□□□□□ -0.45
HOXA13-201ENST00000222753 MGAM2Q2M2H8 2515 aa12.23□□□□□ -0.45
HOXA13-201ENST00000222753 FAM229AH3BQW9 127 aa12.22□□□□□ -0.45
HOXA13-201ENST00000222753 TLX1NBP0CAT3 122 aa12.22□□□□□ -0.45
HOXA13-201ENST00000222753 AKAP13Q12802 2813 aa12.22□□□□□ -0.45
HOXA13-201ENST00000222753 FAM104AQ969W3 186 aa12.22□□□□□ -0.45
HOXA13-201ENST00000222753 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.45
HOXA13-201ENST00000222753 LINC00313P59037 77 aa12.2□□□□□ -0.46
HOXA13-201ENST00000222753 CD164Q04900 197 aa12.17□□□□□ -0.46
HOXA13-201ENST00000222753 A0A1W2PNM2 257 aa12.16□□□□□ -0.46
HOXA13-201ENST00000222753 SPANXA2-OT1Q8N9U9 137 aa12.16□□□□□ -0.46
HOXA13-201ENST00000222753 IGLV5-48A0A075B6I7 105 aa12.15□□□□□ -0.46
HOXA13-201ENST00000222753 CHTF8P0CG12 524 aa12.15□□□□□ -0.46
HOXA13-201ENST00000222753 ATRQ13535 2644 aa12.15□□□□□ -0.46
HOXA13-201ENST00000222753 NBDYA0A0U1RRE5 68 aa12.15□□□□□ -0.46
HOXA13-201ENST00000222753 SPACA4Q8TDM5 124 aa12.15□□□□□ -0.47
HOXA13-201ENST00000222753 C8orf17Q9NRJ1 99 aa12.14□□□□□ -0.47
HOXA13-201ENST00000222753 OCR1Q9BZK8 76 aa12.13□□□□□ -0.47
HOXA13-201ENST00000222753 ITPR3Q14573 2671 aa12.12□□□□□ -0.47
HOXA13-201ENST00000222753 ZNF292O60281 2723 aa12.11□□□□□ -0.47
HOXA13-201ENST00000222753 UQCR11O14957 56 aa12.1□□□□□ -0.47
HOXA13-201ENST00000222753 CHD6Q8TD26 2715 aa12.1□□□□□ -0.47
HOXA13-201ENST00000222753 WWC2-AS2Q96NR7 200 aa12.09□□□□□ -0.47
HOXA13-201ENST00000222753 SPEGQ15772 3267 aa12.09□□□□□ -0.47
HOXA13-201ENST00000222753 RTL8CO15255 209 aa12.09□□□□□ -0.47
HOXA13-201ENST00000222753 KTN1-AS1Q86SY8 53 aa12.08□□□□□ -0.48
HOXA13-201ENST00000222753 A0A1B0GVX0 72 aa12.07□□□□□ -0.48
HOXA13-201ENST00000222753 FRYLO94915 3013 aa12.05□□□□□ -0.48
HOXA13-201ENST00000222753 CFAP46Q8IYW2 2715 aa12.05□□□□□ -0.48
HOXA13-201ENST00000222753 Q1T7F1 81 aa12.05□□□□□ -0.48
HOXA13-201ENST00000222753 J3QL48 77 aa12.03□□□□□ -0.48
HOXA13-201ENST00000222753 IGLV5-37A0A075B6J1 123 aa12.02□□□□□ -0.48
HOXA13-201ENST00000222753 MAST4O15021 2626 aa12.02□□□□□ -0.48
HOXA13-201ENST00000222753 HELZ2Q9BYK8 2649 aaKnown RBP12.01□□□□□ -0.49
HOXA13-201ENST00000222753 A0A0G2JQZ4 141 aa12□□□□□ -0.49
HOXA13-201ENST00000222753 A0A1W2PNN7 141 aa12□□□□□ -0.49
HOXA13-201ENST00000222753 IGLV8-61A0A075B6I0 122 aa11.99□□□□□ -0.49
HOXA13-201ENST00000222753 Q5XG85 94 aa11.98□□□□□ -0.49
HOXA13-201ENST00000222753 KRTAP10-3P60369 221 aa11.98□□□□□ -0.49
HOXA13-201ENST00000222753 SPRR4Q96PI1 79 aa11.98□□□□□ -0.49
HOXA13-201ENST00000222753 PLA2G1BP04054 148 aaKnown RBP11.98□□□□□ -0.49
HOXA13-201ENST00000222753 KRTAP10-11P60412 298 aa11.97□□□□□ -0.49
HOXA13-201ENST00000222753 SSBP3-AS1Q7Z2R9 100 aa11.97□□□□□ -0.49
HOXA13-201ENST00000222753 BOD1L1Q8NFC6 3051 aa11.97□□□□□ -0.49
HOXA13-201ENST00000222753 MIR22HGQ0VDD5 57 aa11.97□□□□□ -0.49
HOXA13-201ENST00000222753 LCA10Q71F78 164 aa11.96□□□□□ -0.49
HOXA13-201ENST00000222753 CDC42SE1Q9NRR8 79 aa11.96□□□□□ -0.49
HOXA13-201ENST00000222753 KRTAP1-3Q8IUG1 177 aa11.96□□□□□ -0.5
HOXA13-201ENST00000222753 KALRNO60229 2985 aa11.95□□□□□ -0.5
HOXA13-201ENST00000222753 C9orf163Q8N9P6 203 aa11.95□□□□□ -0.5
HOXA13-201ENST00000222753 K7EIL1 84 aa11.95□□□□□ -0.5
HOXA13-201ENST00000222753 TYMSOSQ8TAI1 123 aa11.95□□□□□ -0.5
HOXA13-201ENST00000222753 DSCR10P59022 87 aa11.94□□□□□ -0.5
HOXA13-201ENST00000222753 ZNF861PO60384 105 aa11.93□□□□□ -0.5
HOXA13-201ENST00000222753 CYSTM1Q9H1C7 97 aa11.93□□□□□ -0.5
HOXA13-201ENST00000222753 Q96NJ1 140 aa11.92□□□□□ -0.5
HOXA13-201ENST00000222753 CNBPP62633 177 aaKnown RBP11.91□□□□□ -0.5
HOXA13-201ENST00000222753 ADGRG4Q8IZF6 3080 aa11.89□□□□□ -0.51
HOXA13-201ENST00000222753 KRTAP1-1Q07627 177 aa11.88□□□□□ -0.51
HOXA13-201ENST00000222753 GCN1Q92616 2671 aaKnown RBP11.87□□□□□ -0.51
HOXA13-201ENST00000222753 FP248Q71RG6 208 aaPredicted RBP11.87□□□□□ -0.51
HOXA13-201ENST00000222753 COL6A3P12111 3177 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms