RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 TRAV10A0A0B4J240 114 aa10.66□□□□□ -0.7
SF3A2-201ENST00000221494 ZNF73O43830 326 aaPredicted RBP10.66□□□□□ -0.7
SF3A2-201ENST00000221494 Q8N3U1 123 aa10.66□□□□□ -0.7
SF3A2-201ENST00000221494 NOTCH1P46531 2555 aa10.65□□□□□ -0.7
SF3A2-201ENST00000221494 DAD1P61803 113 aa10.65□□□□□ -0.71
SF3A2-201ENST00000221494 Q6ZRU5 148 aa10.64□□□□□ -0.71
SF3A2-201ENST00000221494 NBEAL1Q6ZS30 2694 aa10.64□□□□□ -0.71
SF3A2-201ENST00000221494 Q8NAQ8 132 aa10.63□□□□□ -0.71
SF3A2-201ENST00000221494 MIFP14174 115 aa10.62□□□□□ -0.71
SF3A2-201ENST00000221494 MRPL55Q7Z7F7 128 aaKnown RBP10.62□□□□□ -0.71
SF3A2-201ENST00000221494 C6orf48Q9UBA6 75 aa10.62□□□□□ -0.71
SF3A2-201ENST00000221494 MGAM2Q2M2H8 2515 aa10.61□□□□□ -0.71
SF3A2-201ENST00000221494 F8WEM9 126 aa10.61□□□□□ -0.71
SF3A2-201ENST00000221494 DEFB4AO15263 64 aa10.61□□□□□ -0.71
SF3A2-201ENST00000221494 CELA1Q9UNI1 258 aa10.61□□□□□ -0.71
SF3A2-201ENST00000221494 M0R378 163 aa10.61□□□□□ -0.71
SF3A2-201ENST00000221494 NREPQ16612 68 aa10.6□□□□□ -0.71
SF3A2-201ENST00000221494 PRR15Q8IV56 129 aa10.6□□□□□ -0.71
SF3A2-201ENST00000221494 RMI2Q96E14 147 aa10.6□□□□□ -0.71
SF3A2-201ENST00000221494 A0A1B0GW54 56 aa10.59□□□□□ -0.71
SF3A2-201ENST00000221494 VPREB1P12018 145 aa10.59□□□□□ -0.71
SF3A2-201ENST00000221494 LINC00528Q8N1L1 170 aa10.58□□□□□ -0.72
SF3A2-201ENST00000221494 BPY2O14599 106 aa10.57□□□□□ -0.72
SF3A2-201ENST00000221494 KPRPQ5T749 579 aaPredicted RBP10.57□□□□□ -0.72
SF3A2-201ENST00000221494 SNURFQ9Y675 71 aa10.57□□□□□ -0.72
SF3A2-201ENST00000221494 PRB2P02812 416 aaPredicted RBP10.57□□□□□ -0.72
SF3A2-201ENST00000221494 TM2D3Q9BRN9 247 aa10.57□□□□□ -0.72
SF3A2-201ENST00000221494 SPART-AS1P0CW21 52 aa10.56□□□□□ -0.72
SF3A2-201ENST00000221494 FP248Q71RG6 208 aaPredicted RBP10.56□□□□□ -0.72
SF3A2-201ENST00000221494 TMEM254Q8TBM7 123 aa10.56□□□□□ -0.72
SF3A2-201ENST00000221494 KLK12Q9UKR0 248 aa10.56□□□□□ -0.72
SF3A2-201ENST00000221494 K7EIL1 84 aa10.54□□□□□ -0.72
SF3A2-201ENST00000221494 H3BS24 57 aa10.54□□□□□ -0.72
SF3A2-201ENST00000221494 XAGE1AQ9HD64 81 aa10.54□□□□□ -0.72
SF3A2-201ENST00000221494 IGKV4-1P06312 121 aa10.52□□□□□ -0.72
SF3A2-201ENST00000221494 C11orf45Q8TAV5 145 aa10.52□□□□□ -0.72
SF3A2-201ENST00000221494 H3BNG1 76 aa10.52□□□□□ -0.73
SF3A2-201ENST00000221494 CAMK2N2Q96S95 79 aa10.52□□□□□ -0.73
SF3A2-201ENST00000221494 OCR1Q9BZK8 76 aa10.52□□□□□ -0.73
SF3A2-201ENST00000221494 SCXQ7RTU7 201 aa10.5□□□□□ -0.73
SF3A2-201ENST00000221494 PRYO14603 147 aa10.49□□□□□ -0.73
SF3A2-201ENST00000221494 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
SF3A2-201ENST00000221494 TENM3Q9P273 2699 aa10.48□□□□□ -0.73
SF3A2-201ENST00000221494 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
SF3A2-201ENST00000221494 IGLV5-48A0A075B6I7 105 aa10.47□□□□□ -0.73
SF3A2-201ENST00000221494 KCNQ1DNQ9H478 68 aa10.46□□□□□ -0.74
SF3A2-201ENST00000221494 LCE6AA0A183 80 aa10.43□□□□□ -0.74
SF3A2-201ENST00000221494 HTN3P15516 51 aa10.43□□□□□ -0.74
SF3A2-201ENST00000221494 DNHD1Q96M86 4753 aa10.43□□□□□ -0.74
SF3A2-201ENST00000221494 FUSP35637 526 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3A2-201ENST00000221494 C15orf56Q8N910 161 aa10.43□□□□□ -0.74
SF3A2-201ENST00000221494 RBM12B-AS1Q9P1G2 102 aa10.42□□□□□ -0.74
SF3A2-201ENST00000221494 DHRS4-AS1Q9P1J3 65 aa10.42□□□□□ -0.74
SF3A2-201ENST00000221494 PLA2G2DQ9UNK4 145 aa10.42□□□□□ -0.74
SF3A2-201ENST00000221494 Q6ZTC4 211 aa10.41□□□□□ -0.74
SF3A2-201ENST00000221494 HUWE1Q7Z6Z7 4374 aaKnown RBP10.4□□□□□ -0.74
SF3A2-201ENST00000221494 ESRGQ1W209 222 aa10.39□□□□□ -0.75
SF3A2-201ENST00000221494 Q8N377 158 aa10.39□□□□□ -0.75
SF3A2-201ENST00000221494 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
SF3A2-201ENST00000221494 TLX1NBP0CAT3 122 aa10.37□□□□□ -0.75
SF3A2-201ENST00000221494 Q6ZRP5 223 aa10.37□□□□□ -0.75
SF3A2-201ENST00000221494 IGLV5-37A0A075B6J1 123 aa10.36□□□□□ -0.75
SF3A2-201ENST00000221494 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
SF3A2-201ENST00000221494 KRTAP21-3Q3LHN1 58 aa10.36□□□□□ -0.75
SF3A2-201ENST00000221494 WFDC10BQ8IUB3 73 aa10.36□□□□□ -0.75
SF3A2-201ENST00000221494 Q8N9L7 120 aa10.36□□□□□ -0.75
SF3A2-201ENST00000221494 LINC00474Q9P2X8 69 aa10.36□□□□□ -0.75
SF3A2-201ENST00000221494 TNP2Q05952 138 aa10.35□□□□□ -0.75
SF3A2-201ENST00000221494 Q6ZRX8 168 aa10.34□□□□□ -0.75
SF3A2-201ENST00000221494 DNAH9Q9NYC9 4486 aa10.34□□□□□ -0.75
SF3A2-201ENST00000221494 C3orf84H3BNL1 204 aa10.34□□□□□ -0.75
SF3A2-201ENST00000221494 LINC01556Q5JQF7 62 aa10.34□□□□□ -0.75
SF3A2-201ENST00000221494 Q8NBF4 154 aa10.34□□□□□ -0.75
SF3A2-201ENST00000221494 SPRR4Q96PI1 79 aa10.34□□□□□ -0.75
SF3A2-201ENST00000221494 C7orf33Q8WU49 177 aa10.33□□□□□ -0.76
SF3A2-201ENST00000221494 DEFB131BA0A096LNP1 70 aa10.32□□□□□ -0.76
SF3A2-201ENST00000221494 SPRR1AP35321 89 aa10.32□□□□□ -0.76
SF3A2-201ENST00000221494 B9D2Q9BPU9 175 aa10.32□□□□□ -0.76
SF3A2-201ENST00000221494 KRTAP4-16G5E9R7 235 aaPredicted RBP10.31□□□□□ -0.76
SF3A2-201ENST00000221494 HIGD2AQ9BW72 106 aa10.31□□□□□ -0.76
SF3A2-201ENST00000221494 A0A1W2PNM2 257 aa10.3□□□□□ -0.76
SF3A2-201ENST00000221494 KTN1-AS1Q86SY8 53 aa10.3□□□□□ -0.76
SF3A2-201ENST00000221494 PRR26Q8N8Z3 221 aa10.3□□□□□ -0.76
SF3A2-201ENST00000221494 SMIM29Q86T20 159 aa10.3□□□□□ -0.76
SF3A2-201ENST00000221494 ZCCHC13Q8WW36 166 aaKnown RBP10.3□□□□□ -0.76
SF3A2-201ENST00000221494 COL7A1Q02388 2944 aa10.3□□□□□ -0.76
SF3A2-201ENST00000221494 C1orf137Q5JT78 98 aa10.29□□□□□ -0.76
SF3A2-201ENST00000221494 FAM229BQ4G0N7 80 aa10.28□□□□□ -0.76
SF3A2-201ENST00000221494 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
SF3A2-201ENST00000221494 MEGF8Q7Z7M0 2845 aa10.28□□□□□ -0.76
SF3A2-201ENST00000221494 ETDCA0A1B0GVM5 59 aa10.28□□□□□ -0.76
SF3A2-201ENST00000221494 hDV103S1A0JD37 113 aa10.28□□□□□ -0.76
SF3A2-201ENST00000221494 STAB2Q8WWQ8 2551 aa10.27□□□□□ -0.76
SF3A2-201ENST00000221494 DEFB105AQ8NG35 78 aa10.27□□□□□ -0.77
SF3A2-201ENST00000221494 IGLV1-50A0A075B6I6 118 aa10.26□□□□□ -0.77
SF3A2-201ENST00000221494 C8orf87E5RJ46 101 aa10.25□□□□□ -0.77
SF3A2-201ENST00000221494 IGKV2D-24A0A075B6R9 120 aa10.25□□□□□ -0.77
SF3A2-201ENST00000221494 Q9BRP9 147 aa10.25□□□□□ -0.77
SF3A2-201ENST00000221494 CYP4F30PQ9H0H9 118 aa10.25□□□□□ -0.77
SF3A2-201ENST00000221494 FAM30AQ9NZY2 134 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms