RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 LOC110117498A0A087WWA1 95 aa9.57□□□□□ -0.88
CNOT3-201ENST00000221232 LINC01547P58512 204 aaPredicted RBP9.57□□□□□ -0.88
CNOT3-201ENST00000221232 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.57□□□□□ -0.88
CNOT3-201ENST00000221232 NKAPP1Q8N9T2 125 aa9.57□□□□□ -0.88
CNOT3-201ENST00000221232 BAHCC1Q9P281 2608 aa9.57□□□□□ -0.88
CNOT3-201ENST00000221232 F8WDY8 70 aa9.57□□□□□ -0.88
CNOT3-201ENST00000221232 CMYA5Q8N3K9 4069 aa9.57□□□□□ -0.88
CNOT3-201ENST00000221232 LINC00588Q9Y4M8 146 aa9.57□□□□□ -0.88
CNOT3-201ENST00000221232 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
CNOT3-201ENST00000221232 C7orf33Q8WU49 177 aa9.55□□□□□ -0.88
CNOT3-201ENST00000221232 CRYGAP11844 174 aa9.54□□□□□ -0.88
CNOT3-201ENST00000221232 MGAM2Q2M2H8 2515 aa9.53□□□□□ -0.88
CNOT3-201ENST00000221232 LINC00336Q6ZUF6 198 aa9.53□□□□□ -0.88
CNOT3-201ENST00000221232 DPH3Q96FX2 82 aa9.53□□□□□ -0.88
CNOT3-201ENST00000221232 ATP5EP2Q5VTU8 51 aa9.53□□□□□ -0.88
CNOT3-201ENST00000221232 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.89
CNOT3-201ENST00000221232 TRBV7-4A0A0J9YYF1 115 aa9.51□□□□□ -0.89
CNOT3-201ENST00000221232 DNAH10OSP0CZ25 163 aa9.51□□□□□ -0.89
CNOT3-201ENST00000221232 Q8N9L7 120 aa9.51□□□□□ -0.89
CNOT3-201ENST00000221232 C3orf84H3BNL1 204 aa9.51□□□□□ -0.89
CNOT3-201ENST00000221232 C20orf197Q8N268 126 aa9.5□□□□□ -0.89
CNOT3-201ENST00000221232 A0A0U1RQV1 116 aa9.49□□□□□ -0.89
CNOT3-201ENST00000221232 CSMD3Q7Z407 3707 aa9.49□□□□□ -0.89
CNOT3-201ENST00000221232 TRBV7-6A0A0J9YX20 115 aa9.48□□□□□ -0.89
CNOT3-201ENST00000221232 PDE6GP18545 87 aa9.48□□□□□ -0.89
CNOT3-201ENST00000221232 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
CNOT3-201ENST00000221232 Q8N377 158 aa9.46□□□□□ -0.89
CNOT3-201ENST00000221232 KCNQ1DNQ9H478 68 aa9.46□□□□□ -0.89
CNOT3-201ENST00000221232 LYSTQ99698 3801 aa9.46□□□□□ -0.89
CNOT3-201ENST00000221232 H3BQ85 93 aa9.45□□□□□ -0.9
CNOT3-201ENST00000221232 K7EIL1 84 aa9.45□□□□□ -0.9
CNOT3-201ENST00000221232 KRTAP7-1Q8IUC3 87 aa9.45□□□□□ -0.9
CNOT3-201ENST00000221232 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
CNOT3-201ENST00000221232 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
CNOT3-201ENST00000221232 Q9BRP9 147 aa9.44□□□□□ -0.9
CNOT3-201ENST00000221232 SNURFQ9Y675 71 aa9.44□□□□□ -0.9
CNOT3-201ENST00000221232 ETDCA0A1B0GVM5 59 aa9.43□□□□□ -0.9
CNOT3-201ENST00000221232 IGKV2-24A0A0C4DH68 120 aa9.42□□□□□ -0.9
CNOT3-201ENST00000221232 NREPQ16612 68 aa9.42□□□□□ -0.9
CNOT3-201ENST00000221232 ERC2-IT1O76042 136 aa9.42□□□□□ -0.9
CNOT3-201ENST00000221232 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
CNOT3-201ENST00000221232 IGLV1-50A0A075B6I6 118 aa9.41□□□□□ -0.9
CNOT3-201ENST00000221232 BPY2O14599 106 aa9.41□□□□□ -0.9
CNOT3-201ENST00000221232 UBE2BP63146 152 aa9.41□□□□□ -0.9
CNOT3-201ENST00000221232 HUWE1Q7Z6Z7 4374 aaKnown RBP9.41□□□□□ -0.9
CNOT3-201ENST00000221232 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
CNOT3-201ENST00000221232 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
CNOT3-201ENST00000221232 CXCL6P80162 114 aa9.41□□□□□ -0.9
CNOT3-201ENST00000221232 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.9
CNOT3-201ENST00000221232 TM2D3Q9BRN9 247 aa9.4□□□□□ -0.9
CNOT3-201ENST00000221232 TENM2Q9NT68 2774 aa9.4□□□□□ -0.91
CNOT3-201ENST00000221232 Q6ZRX8 168 aa9.4□□□□□ -0.91
CNOT3-201ENST00000221232 DNAH10Q8IVF4 4471 aa9.39□□□□□ -0.91
CNOT3-201ENST00000221232 DNAH3Q8TD57 4116 aa9.38□□□□□ -0.91
CNOT3-201ENST00000221232 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
CNOT3-201ENST00000221232 MRPL55Q7Z7F7 128 aaKnown RBP9.38□□□□□ -0.91
CNOT3-201ENST00000221232 V9GYY9 64 aa9.38□□□□□ -0.91
CNOT3-201ENST00000221232 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
CNOT3-201ENST00000221232 RMI2Q96E14 147 aa9.38□□□□□ -0.91
CNOT3-201ENST00000221232 KRTAP1-5Q9BYS1 174 aa9.38□□□□□ -0.91
CNOT3-201ENST00000221232 TMEM258P61165 79 aa9.37□□□□□ -0.91
CNOT3-201ENST00000221232 TRAV7A0A075B6U4 112 aa9.37□□□□□ -0.91
CNOT3-201ENST00000221232 COL7A1Q02388 2944 aa9.35□□□□□ -0.91
CNOT3-201ENST00000221232 KRTAP4-16G5E9R7 235 aaPredicted RBP9.35□□□□□ -0.91
CNOT3-201ENST00000221232 PSCAO43653 123 aa9.35□□□□□ -0.91
CNOT3-201ENST00000221232 DHRS4-AS1Q9P1J3 65 aa9.35□□□□□ -0.91
CNOT3-201ENST00000221232 PRO0628Q9UI54 55 aa9.35□□□□□ -0.91
CNOT3-201ENST00000221232 A0A1W2PNM2 257 aa9.34□□□□□ -0.91
CNOT3-201ENST00000221232 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
CNOT3-201ENST00000221232 PRYO14603 147 aa9.33□□□□□ -0.92
CNOT3-201ENST00000221232 PRLHP81277 87 aa9.33□□□□□ -0.92
CNOT3-201ENST00000221232 A0A096LNI7 61 aa9.33□□□□□ -0.92
CNOT3-201ENST00000221232 UBE2DNLQ8IWF7 75 aa9.32□□□□□ -0.92
CNOT3-201ENST00000221232 PLA2G2DQ9UNK4 145 aa9.32□□□□□ -0.92
CNOT3-201ENST00000221232 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
CNOT3-201ENST00000221232 IGKV4-1P06312 121 aa9.32□□□□□ -0.92
CNOT3-201ENST00000221232 FUSP35637 526 aaKnown RBP eCLIP9.32□□□□□ -0.92
CNOT3-201ENST00000221232 IGLV5-48A0A075B6I7 105 aa9.31□□□□□ -0.92
CNOT3-201ENST00000221232 REG3GQ6UW15 175 aa9.31□□□□□ -0.92
CNOT3-201ENST00000221232 DNAH1Q9P2D7 4330 aa9.31□□□□□ -0.92
CNOT3-201ENST00000221232 CHTF8P0CG12 524 aa9.31□□□□□ -0.92
CNOT3-201ENST00000221232 SPRR1AP35321 89 aa9.31□□□□□ -0.92
CNOT3-201ENST00000221232 HIGD2AQ9BW72 106 aa9.3□□□□□ -0.92
CNOT3-201ENST00000221232 DEFB116Q30KQ4 102 aa9.29□□□□□ -0.92
CNOT3-201ENST00000221232 IGLV5-37A0A075B6J1 123 aa9.29□□□□□ -0.92
CNOT3-201ENST00000221232 H7BZZ5 65 aa9.29□□□□□ -0.92
CNOT3-201ENST00000221232 LINC00474Q9P2X8 69 aa9.29□□□□□ -0.92
CNOT3-201ENST00000221232 F8WEM9 126 aa9.28□□□□□ -0.92
CNOT3-201ENST00000221232 C1orf195Q5TG92 126 aa9.28□□□□□ -0.92
CNOT3-201ENST00000221232 BRK1Q8WUW1 75 aa9.28□□□□□ -0.92
CNOT3-201ENST00000221232 DNAH9Q9NYC9 4486 aa9.27□□□□□ -0.92
CNOT3-201ENST00000221232 FAM30AQ9NZY2 134 aa9.25□□□□□ -0.93
CNOT3-201ENST00000221232 TNP2Q05952 138 aa9.25□□□□□ -0.93
CNOT3-201ENST00000221232 FP248Q71RG6 208 aaPredicted RBP9.25□□□□□ -0.93
CNOT3-201ENST00000221232 PHF5AQ7RTV0 110 aaKnown RBP9.25□□□□□ -0.93
CNOT3-201ENST00000221232 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
CNOT3-201ENST00000221232 BCE1O60756 84 aa9.24□□□□□ -0.93
CNOT3-201ENST00000221232 Q8NBF4 154 aa9.24□□□□□ -0.93
CNOT3-201ENST00000221232 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
CNOT3-201ENST00000221232 SMIM29Q86T20 159 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms