RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 B5MCH6 92 aa14.3□□□□□ -0.12
HOXC8-201ENST00000040584 CCDC179H3BU77 68 aa14.29□□□□□ -0.12
HOXC8-201ENST00000040584 C14orf177Q52M58 125 aa14.29□□□□□ -0.12
HOXC8-201ENST00000040584 hADV29S1A0JD25 119 aa14.29□□□□□ -0.12
HOXC8-201ENST00000040584 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.28□□□□□ -0.12
HOXC8-201ENST00000040584 GHRHP01286 108 aa14.27□□□□□ -0.12
HOXC8-201ENST00000040584 Q8NDZ9 215 aa14.27□□□□□ -0.12
HOXC8-201ENST00000040584 LINC00846Q9NV44 126 aa14.27□□□□□ -0.12
HOXC8-201ENST00000040584 A0A087WTM6 91 aa14.27□□□□□ -0.13
HOXC8-201ENST00000040584 DNAH17Q9UFH2 4485 aa14.24□□□□□ -0.13
HOXC8-201ENST00000040584 RPL18AQ02543 176 aaKnown RBP14.24□□□□□ -0.13
HOXC8-201ENST00000040584 TRBV7-6A0A0J9YX20 115 aa14.23□□□□□ -0.13
HOXC8-201ENST00000040584 NDUFC2-KCTD14E9PQ53 114 aa14.23□□□□□ -0.13
HOXC8-201ENST00000040584 FRAS1Q86XX4 4008 aa14.23□□□□□ -0.13
HOXC8-201ENST00000040584 RTL8CO15255 209 aa14.23□□□□□ -0.13
HOXC8-201ENST00000040584 CNBPP62633 177 aaKnown RBP14.23□□□□□ -0.13
HOXC8-201ENST00000040584 ATP5EP2Q5VTU8 51 aa14.22□□□□□ -0.13
HOXC8-201ENST00000040584 HIST1H4AP62805 103 aaKnown RBP14.21□□□□□ -0.13
HOXC8-201ENST00000040584 ATOX1O00244 68 aa14.21□□□□□ -0.14
HOXC8-201ENST00000040584 TNP2Q05952 138 aa14.21□□□□□ -0.14
HOXC8-201ENST00000040584 DIRC1Q969H9 104 aa14.21□□□□□ -0.14
HOXC8-201ENST00000040584 TRAV23DV6A0A075B6W5 121 aa14.2□□□□□ -0.14
HOXC8-201ENST00000040584 TLX1NBP0CAT3 122 aa14.2□□□□□ -0.14
HOXC8-201ENST00000040584 RBM3P98179 157 aaKnown RBP14.2□□□□□ -0.14
HOXC8-201ENST00000040584 Q6ZRP5 223 aa14.2□□□□□ -0.14
HOXC8-201ENST00000040584 PDE6GP18545 87 aa14.19□□□□□ -0.14
HOXC8-201ENST00000040584 UQCRQO14949 82 aa14.18□□□□□ -0.14
HOXC8-201ENST00000040584 XAGE1AQ9HD64 81 aa14.18□□□□□ -0.14
HOXC8-201ENST00000040584 LOC110117498A0A087WWA1 95 aa14.17□□□□□ -0.14
HOXC8-201ENST00000040584 TRBV10-3A0A0K0K1G6 114 aa14.17□□□□□ -0.14
HOXC8-201ENST00000040584 C3orf22Q8N5N4 141 aa14.17□□□□□ -0.14
HOXC8-201ENST00000040584 KMT2CQ8NEZ4 4911 aaKnown RBP14.16□□□□□ -0.14
HOXC8-201ENST00000040584 M0R378 163 aa14.16□□□□□ -0.14
HOXC8-201ENST00000040584 FUSP35637 526 aaKnown RBP eCLIP14.16□□□□□ -0.14
HOXC8-201ENST00000040584 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.16□□□□□ -0.14
HOXC8-201ENST00000040584 SS18L2Q9UHA2 77 aa14.15□□□□□ -0.14
HOXC8-201ENST00000040584 ZNF73O43830 326 aaPredicted RBP14.14□□□□□ -0.15
HOXC8-201ENST00000040584 COX7BP24311 80 aa14.14□□□□□ -0.15
HOXC8-201ENST00000040584 UBL5Q9BZL1 73 aa14.14□□□□□ -0.15
HOXC8-201ENST00000040584 IGKV3D-7A0A0C4DH55 119 aa14.14□□□□□ -0.15
HOXC8-201ENST00000040584 LAMTOR3Q9UHA4 124 aa14.14□□□□□ -0.15
HOXC8-201ENST00000040584 LOC107984640A0A0U1RRK4 108 aa14.13□□□□□ -0.15
HOXC8-201ENST00000040584 VPREB1P12018 145 aa14.13□□□□□ -0.15
HOXC8-201ENST00000040584 C9orf163Q8N9P6 203 aa14.12□□□□□ -0.15
HOXC8-201ENST00000040584 HECTD4Q9Y4D8 3996 aa14.12□□□□□ -0.15
HOXC8-201ENST00000040584 COX7CP15954 63 aa14.12□□□□□ -0.15
HOXC8-201ENST00000040584 Q6ZQT0 140 aa14.12□□□□□ -0.15
HOXC8-201ENST00000040584 RYR2Q92736 4967 aa14.11□□□□□ -0.15
HOXC8-201ENST00000040584 ELOF1P60002 83 aaKnown RBP14.11□□□□□ -0.15
HOXC8-201ENST00000040584 DSCR8Q96T75 97 aa14.11□□□□□ -0.15
HOXC8-201ENST00000040584 FAT2Q9NYQ8 4349 aa14.11□□□□□ -0.15
HOXC8-201ENST00000040584 Q6ZQY7 126 aa14.1□□□□□ -0.15
HOXC8-201ENST00000040584 C9orf153Q5TBE3 101 aa14.08□□□□□ -0.16
HOXC8-201ENST00000040584 DNAH11Q96DT5 4516 aa14.06□□□□□ -0.16
HOXC8-201ENST00000040584 A0A096LNI7 61 aa14.06□□□□□ -0.16
HOXC8-201ENST00000040584 IGLV5-52A0A0A0MRZ9 124 aa14.05□□□□□ -0.16
HOXC8-201ENST00000040584 IGKV2-24A0A0C4DH68 120 aa14.05□□□□□ -0.16
HOXC8-201ENST00000040584 C16orf90A8MZG2 172 aa14.04□□□□□ -0.16
HOXC8-201ENST00000040584 KRTAP10-2P60368 255 aa14.03□□□□□ -0.16
HOXC8-201ENST00000040584 FAM168BA1KXE4 195 aa14.02□□□□□ -0.16
HOXC8-201ENST00000040584 CHTF8P0CG12 524 aa14.02□□□□□ -0.16
HOXC8-201ENST00000040584 CRYGAP11844 174 aa14.02□□□□□ -0.16
HOXC8-201ENST00000040584 SERP2Q8N6R1 65 aa14.02□□□□□ -0.16
HOXC8-201ENST00000040584 SERTAD4-AS1Q5TG53 156 aa14.01□□□□□ -0.17
HOXC8-201ENST00000040584 PLA2G2DQ9UNK4 145 aa14.01□□□□□ -0.17
HOXC8-201ENST00000040584 PKIGQ9Y2B9 76 aa14□□□□□ -0.17
HOXC8-201ENST00000040584 LINC00528Q8N1L1 170 aa13.99□□□□□ -0.17
HOXC8-201ENST00000040584 PKD1P98161 4303 aa13.98□□□□□ -0.17
HOXC8-201ENST00000040584 A0A087WVE0 104 aa13.97□□□□□ -0.17
HOXC8-201ENST00000040584 TRBV7-4A0A0J9YYF1 115 aa13.97□□□□□ -0.17
HOXC8-201ENST00000040584 KRTAP7-1Q8IUC3 87 aa13.97□□□□□ -0.17
HOXC8-201ENST00000040584 BCE1O60756 84 aa13.97□□□□□ -0.17
HOXC8-201ENST00000040584 LINC00336Q6ZUF6 198 aa13.97□□□□□ -0.17
HOXC8-201ENST00000040584 DNAH5Q8TE73 4624 aa13.96□□□□□ -0.17
HOXC8-201ENST00000040584 PANO1I0J062 215 aa13.96□□□□□ -0.17
HOXC8-201ENST00000040584 FAM19A5Q7Z5A7 132 aaPredicted RBP13.96□□□□□ -0.17
HOXC8-201ENST00000040584 KCNQ1DNQ9H478 68 aa13.96□□□□□ -0.17
HOXC8-201ENST00000040584 IGLV5-37A0A075B6J1 123 aa13.95□□□□□ -0.18
HOXC8-201ENST00000040584 NKAPP1Q8N9T2 125 aa13.95□□□□□ -0.18
HOXC8-201ENST00000040584 A0A1W2PNN7 141 aa13.94□□□□□ -0.18
HOXC8-201ENST00000040584 CXCL6P80162 114 aa13.93□□□□□ -0.18
HOXC8-201ENST00000040584 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.93□□□□□ -0.18
HOXC8-201ENST00000040584 LINC00474Q9P2X8 69 aa13.93□□□□□ -0.18
HOXC8-201ENST00000040584 Q6ZVQ6 151 aa13.92□□□□□ -0.18
HOXC8-201ENST00000040584 DPH3Q96FX2 82 aa13.91□□□□□ -0.18
HOXC8-201ENST00000040584 LINC01547P58512 204 aaPredicted RBP13.9□□□□□ -0.18
HOXC8-201ENST00000040584 SPACA4Q8TDM5 124 aa13.9□□□□□ -0.18
HOXC8-201ENST00000040584 RYR3Q15413 4870 aa13.9□□□□□ -0.19
HOXC8-201ENST00000040584 C7orf33Q8WU49 177 aa13.89□□□□□ -0.19
HOXC8-201ENST00000040584 FAM19A1Q7Z5A9 133 aa13.89□□□□□ -0.19
HOXC8-201ENST00000040584 HAMPP81172 84 aa13.87□□□□□ -0.19
HOXC8-201ENST00000040584 SMIM20Q8N5G0 67 aa13.87□□□□□ -0.19
HOXC8-201ENST00000040584 DHRS4-AS1Q9P1J3 65 aa13.87□□□□□ -0.19
HOXC8-201ENST00000040584 MRPL55Q7Z7F7 128 aaKnown RBP13.86□□□□□ -0.19
HOXC8-201ENST00000040584 PRYO14603 147 aa13.84□□□□□ -0.19
HOXC8-201ENST00000040584 A0A1B0GVY2 172 aa13.84□□□□□ -0.19
HOXC8-201ENST00000040584 RPL37AP8A6NKH3 93 aa13.84□□□□□ -0.19
HOXC8-201ENST00000040584 KRTAP10-1P60331 282 aa13.83□□□□□ -0.2
HOXC8-201ENST00000040584 IGLV1-50A0A075B6I6 118 aa13.82□□□□□ -0.2
HOXC8-201ENST00000040584 A0A1B0GW54 56 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms