RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SPINK6Q6UWN8 80 aa8.09□□□□□ -1.11
CHPF2-201ENST00000035307 J3KT08 172 aa8.09□□□□□ -1.11
CHPF2-201ENST00000035307 Q6ZVQ6 151 aa8.08□□□□□ -1.12
CHPF2-201ENST00000035307 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
CHPF2-201ENST00000035307 MPLKIPQ8TAP9 179 aa8.08□□□□□ -1.12
CHPF2-201ENST00000035307 C7orf33Q8WU49 177 aa8.08□□□□□ -1.12
CHPF2-201ENST00000035307 CASC10Q5T4H9 136 aa8.07□□□□□ -1.12
CHPF2-201ENST00000035307 MUC7Q8TAX7 377 aa8.07□□□□□ -1.12
CHPF2-201ENST00000035307 LOC107984640A0A0U1RRK4 108 aa8.07□□□□□ -1.12
CHPF2-201ENST00000035307 C1orf137Q5JT78 98 aa8.07□□□□□ -1.12
CHPF2-201ENST00000035307 Q6Q795 121 aa8.07□□□□□ -1.12
CHPF2-201ENST00000035307 FAM168BA1KXE4 195 aa8.07□□□□□ -1.12
CHPF2-201ENST00000035307 KIAA0087Q14695 138 aa8.06□□□□□ -1.12
CHPF2-201ENST00000035307 ANK3Q12955 4377 aaKnown RBP8.05□□□□□ -1.12
CHPF2-201ENST00000035307 Q6ZRP5 223 aa8.05□□□□□ -1.12
CHPF2-201ENST00000035307 B9D2Q9BPU9 175 aa8.05□□□□□ -1.12
CHPF2-201ENST00000035307 C22orf24Q9Y442 160 aa8.04□□□□□ -1.12
CHPF2-201ENST00000035307 CHTF8P0CG12 524 aa8.04□□□□□ -1.12
CHPF2-201ENST00000035307 ATP5EP2Q5VTU8 51 aa8.04□□□□□ -1.12
CHPF2-201ENST00000035307 ST20-AS1Q8NBB2 130 aa8.03□□□□□ -1.12
CHPF2-201ENST00000035307 LINC01547P58512 204 aaPredicted RBP8.03□□□□□ -1.12
CHPF2-201ENST00000035307 MRPL55Q7Z7F7 128 aaKnown RBP8.03□□□□□ -1.12
CHPF2-201ENST00000035307 DNAH10OSP0CZ25 163 aa8.03□□□□□ -1.12
CHPF2-201ENST00000035307 LINC00167Q96N53 147 aa8.03□□□□□ -1.12
CHPF2-201ENST00000035307 DHRS4-AS1Q9P1J3 65 aa8.03□□□□□ -1.12
CHPF2-201ENST00000035307 FAM236DA0A1B0GTK5 79 aa8.03□□□□□ -1.12
CHPF2-201ENST00000035307 H3BQ85 93 aa8.03□□□□□ -1.12
CHPF2-201ENST00000035307 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
CHPF2-201ENST00000035307 A0A0G2JQZ4 141 aa8.02□□□□□ -1.13
CHPF2-201ENST00000035307 A0A1W2PNN7 141 aa8.02□□□□□ -1.13
CHPF2-201ENST00000035307 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
CHPF2-201ENST00000035307 A0A087WSZ3 146 aa8.02□□□□□ -1.13
CHPF2-201ENST00000035307 NDUFB1O75438 58 aa8.02□□□□□ -1.13
CHPF2-201ENST00000035307 LINC00612Q8N6U2 182 aa8.02□□□□□ -1.13
CHPF2-201ENST00000035307 C5orf47Q569G3 176 aa8.02□□□□□ -1.13
CHPF2-201ENST00000035307 TRBV7-7A0A0K0K1E9 115 aa8.01□□□□□ -1.13
CHPF2-201ENST00000035307 MP68P56378 58 aa8.01□□□□□ -1.13
CHPF2-201ENST00000035307 NUPR2A6NF83 97 aa8.01□□□□□ -1.13
CHPF2-201ENST00000035307 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
CHPF2-201ENST00000035307 REG3GQ6UW15 175 aa8.01□□□□□ -1.13
CHPF2-201ENST00000035307 TM2D3Q9BRN9 247 aa8.01□□□□□ -1.13
CHPF2-201ENST00000035307 C2orf48Q96LS8 159 aa8□□□□□ -1.13
CHPF2-201ENST00000035307 SERTAD4-AS1Q5TG53 156 aa8□□□□□ -1.13
CHPF2-201ENST00000035307 FAM19A3Q7Z5A8 133 aa7.99□□□□□ -1.13
CHPF2-201ENST00000035307 LINC01561Q8N1V8 128 aa7.98□□□□□ -1.13
CHPF2-201ENST00000035307 IGKV4-1P06312 121 aa7.97□□□□□ -1.13
CHPF2-201ENST00000035307 VPREB1P12018 145 aa7.97□□□□□ -1.13
CHPF2-201ENST00000035307 LINC01600Q96MT4 127 aa7.95□□□□□ -1.14
CHPF2-201ENST00000035307 PHF5AQ7RTV0 110 aaKnown RBP7.95□□□□□ -1.14
CHPF2-201ENST00000035307 Q9BRP9 147 aa7.95□□□□□ -1.14
CHPF2-201ENST00000035307 C15orf56Q8N910 161 aa7.95□□□□□ -1.14
CHPF2-201ENST00000035307 TMEM258P61165 79 aa7.95□□□□□ -1.14
CHPF2-201ENST00000035307 Q6ZQT0 140 aa7.95□□□□□ -1.14
CHPF2-201ENST00000035307 AKAP9Q99996 3911 aa7.94□□□□□ -1.14
CHPF2-201ENST00000035307 ELOF1P60002 83 aaKnown RBP7.94□□□□□ -1.14
CHPF2-201ENST00000035307 PRR34Q9NV39 138 aa7.94□□□□□ -1.14
CHPF2-201ENST00000035307 Q8NDZ9 215 aa7.93□□□□□ -1.14
CHPF2-201ENST00000035307 BRK1Q8WUW1 75 aa7.93□□□□□ -1.14
CHPF2-201ENST00000035307 WIPF1O43516 503 aa7.93□□□□□ -1.14
CHPF2-201ENST00000035307 IGLV6-57P01721 117 aa7.92□□□□□ -1.14
CHPF2-201ENST00000035307 TRAV7A0A075B6U4 112 aa7.92□□□□□ -1.14
CHPF2-201ENST00000035307 LINC00208Q96KT6 92 aa7.9□□□□□ -1.14
CHPF2-201ENST00000035307 A0A0U1RQV1 116 aa7.9□□□□□ -1.14
CHPF2-201ENST00000035307 NBDYA0A0U1RRE5 68 aa7.9□□□□□ -1.14
CHPF2-201ENST00000035307 C1orf134Q5TEV5 83 aa7.9□□□□□ -1.15
CHPF2-201ENST00000035307 H3BNG1 76 aa7.89□□□□□ -1.15
CHPF2-201ENST00000035307 CIRBP-AS1Q8TBR5 109 aa7.89□□□□□ -1.15
CHPF2-201ENST00000035307 SMIM29Q86T20 159 aa7.88□□□□□ -1.15
CHPF2-201ENST00000035307 PRYO14603 147 aa7.88□□□□□ -1.15
CHPF2-201ENST00000035307 IGLV5-52A0A0A0MRZ9 124 aa7.88□□□□□ -1.15
CHPF2-201ENST00000035307 Q6ZRX8 168 aa7.87□□□□□ -1.15
CHPF2-201ENST00000035307 RETNLBQ9BQ08 111 aa7.87□□□□□ -1.15
CHPF2-201ENST00000035307 RPL37AP61513 92 aaKnown RBP7.87□□□□□ -1.15
CHPF2-201ENST00000035307 GVQW2A0A096LPI5 108 aaPredicted RBP7.87□□□□□ -1.15
CHPF2-201ENST00000035307 TMEM254Q8TBM7 123 aa7.87□□□□□ -1.15
CHPF2-201ENST00000035307 IGHV6-1A0A0B4J1U7 121 aa7.86□□□□□ -1.15
CHPF2-201ENST00000035307 C4orf48Q5BLP8 95 aa7.85□□□□□ -1.15
CHPF2-201ENST00000035307 KRTAP1-5Q9BYS1 174 aa7.85□□□□□ -1.15
CHPF2-201ENST00000035307 PKIGQ9Y2B9 76 aa7.85□□□□□ -1.15
CHPF2-201ENST00000035307 PCOTHQ58A44 107 aa7.85□□□□□ -1.15
CHPF2-201ENST00000035307 LINC00476Q8WZB0 136 aa7.85□□□□□ -1.15
CHPF2-201ENST00000035307 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
CHPF2-201ENST00000035307 APLNQ9ULZ1 77 aa7.84□□□□□ -1.15
CHPF2-201ENST00000035307 CYSTM1Q9H1C7 97 aa7.84□□□□□ -1.15
CHPF2-201ENST00000035307 SRRM2Q9UQ35 2752 aaKnown RBP7.84□□□□□ -1.15
CHPF2-201ENST00000035307 ERC2-IT1O76042 136 aa7.84□□□□□ -1.16
CHPF2-201ENST00000035307 EPM2AB3EWF7 344 aa7.82□□□□□ -1.16
CHPF2-201ENST00000035307 Q8N377 158 aa7.81□□□□□ -1.16
CHPF2-201ENST00000035307 WWC2-AS2Q96NR7 200 aa7.81□□□□□ -1.16
CHPF2-201ENST00000035307 CASC2Q6XLA1 102 aa7.8□□□□□ -1.16
CHPF2-201ENST00000035307 CXCL6P80162 114 aa7.79□□□□□ -1.16
CHPF2-201ENST00000035307 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
CHPF2-201ENST00000035307 LOC110117498A0A087WWA1 95 aa7.79□□□□□ -1.16
CHPF2-201ENST00000035307 CRYGAP11844 174 aa7.79□□□□□ -1.16
CHPF2-201ENST00000035307 Q8NBF4 154 aa7.79□□□□□ -1.16
CHPF2-201ENST00000035307 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
CHPF2-201ENST00000035307 MOBPQ13875 183 aa7.79□□□□□ -1.16
CHPF2-201ENST00000035307 LINC00474Q9P2X8 69 aa7.79□□□□□ -1.16
CHPF2-201ENST00000035307 SPTSSBQ8NFR3 76 aa7.78□□□□□ -1.16
CHPF2-201ENST00000035307 IGLV1-50A0A075B6I6 118 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 214.8 ms