RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gm10020E9QAZ2 204 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ifi27l2aQ8R412 90 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Rpl15Q9CZM2 204 aaKnown RBP9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm21976J3QNN2 249 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 P01723 117 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm10803Q3TZS6 135 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Susd3Q9D176 269 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ighv1-37A0A0A6YW32 117 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Trbv13-3A0A0B4J1H2 113 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Lgals4Q8K419 326 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Lhx2Q9Z0S2 406 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 HelzQ6DFV5 1964 aaKnown RBP9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 TdhQ8K3F7 373 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm10521E9PZK0 135 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Fbxl7Q5BJ29 491 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Spsb3Q571F5 354 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Eml5Q8BQM8 1977 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tcrg-C1A0A075B5Z0 172 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm37388A0A0A6YY46 143 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tcrg-C3L7N479 172 aa9.88□□□□□ -0.83
Trim56-201ENSMUST00000054384 Lrrc25Q8K1T1 297 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ndufa7Q9Z1P6 113 aaKnown RBP9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ighv1-34A0A075B5V2 117 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ms4a8Q99N10 290 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ovol1Q9WTJ2 267 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Sdk2Q6V4S5 2176 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Q9CQM1 111 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Pcnx2Q5DU28 2122 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Igkv4-57-1A0A075B5M4 119 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 SlaQ60898 281 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Zfp420Q7TMN8 578 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm16381A0A1Y7VKT9 73 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Timm23Q9WTQ8 209 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Vwa8Q8CC88 1905 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 P03985 172 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Srsf7Q8BL97 267 aaKnown RBP9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tmem89Q9DA04 169 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 P18532 116 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Reg1P43137 165 aa9.87□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tmem141A2AJB2 108 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Cdkn1aP39689 159 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Obsl1D3YYU8 1804 aaKnown RBP9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Asphd1Q2TA57 360 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Klk13Q8CGR6 276 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Rnf5O35445 180 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ube2cQ9D1C1 179 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Lsm4Q9QXA5 137 aaKnown RBP9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Plpp2Q9DAX2 276 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ighv1-7A0A075B5T7 117 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Igkv4-68A0A0B4J1I7 117 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Neurog3P70661 214 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tmem171Q4KL18 322 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Rp1l1Q8CGM2 1859 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Sap30O88574 220 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Trav2Q5R1I9 109 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Igkv6-32A0A140T8N9 115 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Hbb-bsA8DUK4 147 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Hbb-b1P02088 147 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Rpl36aP83882 106 aaKnown RBP9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 KncnQ307W7 124 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Slc25a39Q9D8K8 359 aa9.86□□□□□ -0.83
Trim56-201ENSMUST00000054384 Dcaf12l1Q8CBW4 501 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 D930007J09RikQ9D2K6 131 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Saa4P31532 130 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm9747Q810H1 104 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Slc17a9Q8VCL5 447 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Smr2O09133 150 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Defb3Q9WTL0 63 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 AdmP97297 184 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Q4KKZ1 196 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tex48Q9DA81 110 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Fgf16Q9ESL8 207 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Jsrp1Q3MI48 332 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm10604Q3V0X7 143 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Usmg5Q78IK2 58 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Olfr745Q7TRL9 328 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm45213A0A0U1RNZ6 101 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 CckP09240 115 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ccpg1osV9GXK1 122 aa9.85□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm19345G3UYD9 124 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Dido1Q8C9B9 2256 aaKnown RBP9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ighv14-1A0A075B5R4 117 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 P01657 111 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Lynx1P0DP60 116 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 P18533 117 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Pgpep1lQ9CWB5 130 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tdgf1P51865 171 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Shisa3Q3UPR0 238 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm4894Q8CA09 118 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Fer1l4A3KGK3 1992 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tcf20Q9EPQ8 1987 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 PolP10400 120 aa9.84□□□□□ -0.83
Trim56-201ENSMUST00000054384 Wbp1P97764 304 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Zg16Q8K0C5 167 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Ighv3-8A0A075B5T0 131 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Rnf166Q3U9F6 237 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 PerpQ9JK95 193 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Tomm40Q9QYA2 361 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 P01811 117 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Wnt2P21552 360 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 178 ms