RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
PHGDH-221ENST00000641573 WFDC2Q14508 124 aa8.57□□□□□ -1.04
PHGDH-221ENST00000641573 SND1-IT1Q9HBX3 110 aa8.57□□□□□ -1.04
PHGDH-221ENST00000641573 PRO1854Q9UHT4 67 aa8.57□□□□□ -1.04
PHGDH-221ENST00000641573 H3BUT2 72 aa8.56□□□□□ -1.04
PHGDH-221ENST00000641573 SLPIP03973 132 aa8.56□□□□□ -1.04
PHGDH-221ENST00000641573 Q6ZR54 194 aa8.56□□□□□ -1.04
PHGDH-221ENST00000641573 CARD19Q96LW7 228 aa8.56□□□□□ -1.04
PHGDH-221ENST00000641573 NAA38Q9BRA0 125 aaKnown RBP8.56□□□□□ -1.04
PHGDH-221ENST00000641573 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
PHGDH-221ENST00000641573 RNF151Q2KHN1 245 aa8.55□□□□□ -1.04
PHGDH-221ENST00000641573 Q6ZRN7 208 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-221ENST00000641573 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
PHGDH-221ENST00000641573 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
PHGDH-221ENST00000641573 TSPAN13O95857 204 aa8.54□□□□□ -1.04
PHGDH-221ENST00000641573 RTL8CO15255 209 aa8.53□□□□□ -1.04
PHGDH-221ENST00000641573 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
PHGDH-221ENST00000641573 LRCOL1A6NCL2 159 aa8.52□□□□□ -1.05
PHGDH-221ENST00000641573 NDUFC2-KCTD14E9PQ53 114 aa8.52□□□□□ -1.05
PHGDH-221ENST00000641573 H7C2G1 150 aa8.52□□□□□ -1.05
PHGDH-221ENST00000641573 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
PHGDH-221ENST00000641573 IGKV2-28A0A075B6P5 120 aa8.51□□□□□ -1.05
PHGDH-221ENST00000641573 A0A1W2PPM0 123 aa8.51□□□□□ -1.05
PHGDH-221ENST00000641573 IGKV2D-28P01615 120 aa8.51□□□□□ -1.05
PHGDH-221ENST00000641573 VAMP3Q15836 100 aa8.51□□□□□ -1.05
PHGDH-221ENST00000641573 DNAH11Q96DT5 4516 aa8.51□□□□□ -1.05
PHGDH-221ENST00000641573 TRAV13-2A0A0B4J235 113 aa8.5□□□□□ -1.05
PHGDH-221ENST00000641573 NDUFC2O95298 119 aa8.5□□□□□ -1.05
PHGDH-221ENST00000641573 TLX1NBP0CAT3 122 aa8.5□□□□□ -1.05
PHGDH-221ENST00000641573 HERC1Q15751 4861 aa8.5□□□□□ -1.05
PHGDH-221ENST00000641573 Q1RN00 199 aa8.5□□□□□ -1.05
PHGDH-221ENST00000641573 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
PHGDH-221ENST00000641573 XAGE1AQ9HD64 81 aa8.5□□□□□ -1.05
PHGDH-221ENST00000641573 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
PHGDH-221ENST00000641573 PKD1P98161 4303 aa8.5□□□□□ -1.05
PHGDH-221ENST00000641573 CDK2AP2O75956 126 aa8.49□□□□□ -1.05
PHGDH-221ENST00000641573 FABP2P12104 132 aa8.49□□□□□ -1.05
PHGDH-221ENST00000641573 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
PHGDH-221ENST00000641573 C1orf134Q5TEV5 83 aa8.49□□□□□ -1.05
PHGDH-221ENST00000641573 Q6ZRP5 223 aa8.49□□□□□ -1.05
PHGDH-221ENST00000641573 LINC00337Q8N6G1 96 aa8.49□□□□□ -1.05
PHGDH-221ENST00000641573 DYNC1H1Q14204 4646 aaKnown RBP8.48□□□□□ -1.05
PHGDH-221ENST00000641573 PRR3P79522 188 aaKnown RBP8.48□□□□□ -1.05
PHGDH-221ENST00000641573 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
PHGDH-221ENST00000641573 Q8NDZ9 215 aa8.48□□□□□ -1.05
PHGDH-221ENST00000641573 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-221ENST00000641573 PSMB2P49721 201 aa8.47□□□□□ -1.05
PHGDH-221ENST00000641573 A0A087WTM6 91 aa8.46□□□□□ -1.06
PHGDH-221ENST00000641573 LOC107984640A0A0U1RRK4 108 aa8.46□□□□□ -1.06
PHGDH-221ENST00000641573 C16orf90A8MZG2 172 aa8.46□□□□□ -1.06
PHGDH-221ENST00000641573 NCR3O14931 201 aa8.46□□□□□ -1.06
PHGDH-221ENST00000641573 OR13C6PQ8NH95 151 aa8.46□□□□□ -1.06
PHGDH-221ENST00000641573 SPCS1Q9Y6A9 102 aa8.46□□□□□ -1.06
PHGDH-221ENST00000641573 DMBT1Q9UGM3 2413 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-221ENST00000641573 K7EP34 96 aa8.45□□□□□ -1.06
PHGDH-221ENST00000641573 SCGB1C2P0DMR2 95 aa8.45□□□□□ -1.06
PHGDH-221ENST00000641573 C9orf129Q5T035 196 aaKnown RBP8.45□□□□□ -1.06
PHGDH-221ENST00000641573 Q8N1X5 172 aa8.45□□□□□ -1.06
PHGDH-221ENST00000641573 Q8N814 137 aa8.45□□□□□ -1.06
PHGDH-221ENST00000641573 GAGE10A6NGK3 116 aa8.44□□□□□ -1.06
PHGDH-221ENST00000641573 TRIAP1O43715 76 aa8.44□□□□□ -1.06
PHGDH-221ENST00000641573 GAGE2BQ13066 116 aa8.44□□□□□ -1.06
PHGDH-221ENST00000641573 LYRM7Q5U5X0 104 aa8.44□□□□□ -1.06
PHGDH-221ENST00000641573 HSPG2P98160 4391 aa8.43□□□□□ -1.06
PHGDH-221ENST00000641573 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
PHGDH-221ENST00000641573 VPREB1P12018 145 aa8.43□□□□□ -1.06
PHGDH-221ENST00000641573 UBE2V1Q13404 147 aa8.43□□□□□ -1.06
PHGDH-221ENST00000641573 GTF2H5Q6ZYL4 71 aa8.43□□□□□ -1.06
PHGDH-221ENST00000641573 COX6CP09669 75 aa8.41□□□□□ -1.06
PHGDH-221ENST00000641573 RPL28P46779 137 aaKnown RBP8.41□□□□□ -1.06
PHGDH-221ENST00000641573 S100A7L2Q5SY68 101 aa8.41□□□□□ -1.06
PHGDH-221ENST00000641573 C9orf163Q8N9P6 203 aa8.41□□□□□ -1.06
PHGDH-221ENST00000641573 SMIM11BQ8TCY0 68 aa8.41□□□□□ -1.06
PHGDH-221ENST00000641573 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
PHGDH-221ENST00000641573 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
PHGDH-221ENST00000641573 M0R378 163 aa8.4□□□□□ -1.06
PHGDH-221ENST00000641573 DNAH5Q8TE73 4624 aa8.4□□□□□ -1.06
PHGDH-221ENST00000641573 A0A096LNI7 61 aa8.39□□□□□ -1.07
PHGDH-221ENST00000641573 TCL1BO95988 128 aa8.39□□□□□ -1.07
PHGDH-221ENST00000641573 SERTAD4-AS1Q5TG53 156 aa8.39□□□□□ -1.07
PHGDH-221ENST00000641573 PKIGQ9Y2B9 76 aa8.39□□□□□ -1.07
PHGDH-221ENST00000641573 TRBV20-1A0A075B6N2 111 aa8.38□□□□□ -1.07
PHGDH-221ENST00000641573 FAM168BA1KXE4 195 aa8.38□□□□□ -1.07
PHGDH-221ENST00000641573 IGLV6-57P01721 117 aa8.38□□□□□ -1.07
PHGDH-221ENST00000641573 NKAPP1Q8N9T2 125 aa8.38□□□□□ -1.07
PHGDH-221ENST00000641573 IGLV5-37A0A075B6J1 123 aa8.37□□□□□ -1.07
PHGDH-221ENST00000641573 IGKV2-24A0A0C4DH68 120 aa8.37□□□□□ -1.07
PHGDH-221ENST00000641573 TRBV10-3A0A0K0K1G6 114 aa8.37□□□□□ -1.07
PHGDH-221ENST00000641573 TNP2Q05952 138 aa8.37□□□□□ -1.07
PHGDH-221ENST00000641573 H3BMG7 143 aa8.36□□□□□ -1.07
PHGDH-221ENST00000641573 ATXN8Q156A1 80 aa8.36□□□□□ -1.07
PHGDH-221ENST00000641573 LINC01620Q4KN68 170 aa8.36□□□□□ -1.07
PHGDH-221ENST00000641573 SDIM1Q6ZPB5 146 aa8.36□□□□□ -1.07
PHGDH-221ENST00000641573 CLEC2BQ92478 149 aa8.36□□□□□ -1.07
PHGDH-221ENST00000641573 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-221ENST00000641573 KRTAP7-1Q8IUC3 87 aa8.35□□□□□ -1.07
PHGDH-221ENST00000641573 C7orf33Q8WU49 177 aa8.35□□□□□ -1.07
PHGDH-221ENST00000641573 CHTF8P0CG12 524 aa8.34□□□□□ -1.07
PHGDH-221ENST00000641573 FUSP35637 526 aaKnown RBP eCLIP8.34□□□□□ -1.07
PHGDH-221ENST00000641573 C22orf24Q9Y442 160 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms