RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 H0Y8G0 127 aa10.57□□□□□ -0.72
PTPN11-207ENST00000639857 IGKV2D-28P01615 120 aa10.57□□□□□ -0.72
PTPN11-207ENST00000639857 UBE2AP49459 152 aa10.57□□□□□ -0.72
PTPN11-207ENST00000639857 NDUFA12Q9UI09 145 aa10.57□□□□□ -0.72
PTPN11-207ENST00000639857 MYMXA0A1B0GTQ4 84 aa10.56□□□□□ -0.72
PTPN11-207ENST00000639857 SCO1O75880 301 aa10.56□□□□□ -0.72
PTPN11-207ENST00000639857 ATP6V1G1O75348 118 aa10.55□□□□□ -0.72
PTPN11-207ENST00000639857 DPM2O94777 84 aa10.55□□□□□ -0.72
PTPN11-207ENST00000639857 MEIG1Q5JSS6 88 aa10.55□□□□□ -0.72
PTPN11-207ENST00000639857 PLEKHB2Q96CS7 222 aa10.55□□□□□ -0.72
PTPN11-207ENST00000639857 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
PTPN11-207ENST00000639857 TMEM126AQ9H061 195 aa10.55□□□□□ -0.72
PTPN11-207ENST00000639857 LEPROTO15243 131 aa10.54□□□□□ -0.72
PTPN11-207ENST00000639857 SMIM13P0DJ93 91 aa10.54□□□□□ -0.72
PTPN11-207ENST00000639857 FABP4P15090 132 aa10.54□□□□□ -0.72
PTPN11-207ENST00000639857 HERVK_113P61574 105 aa10.54□□□□□ -0.72
PTPN11-207ENST00000639857 Q8NDZ9 215 aa10.54□□□□□ -0.72
PTPN11-207ENST00000639857 M0R378 163 aa10.52□□□□□ -0.73
PTPN11-207ENST00000639857 IGKCP01834 107 aa10.52□□□□□ -0.73
PTPN11-207ENST00000639857 NMUP48645 174 aa10.52□□□□□ -0.73
PTPN11-207ENST00000639857 MIR7-3HGQ8N6C7 128 aa10.52□□□□□ -0.73
PTPN11-207ENST00000639857 IGKV2D-26A0A0A0MRZ7 120 aa10.51□□□□□ -0.73
PTPN11-207ENST00000639857 A0A0U1RRA0 63 aa10.51□□□□□ -0.73
PTPN11-207ENST00000639857 CRYGAP11844 174 aa10.51□□□□□ -0.73
PTPN11-207ENST00000639857 UBR4Q5T4S7 5183 aa10.51□□□□□ -0.73
PTPN11-207ENST00000639857 LRP2P98164 4655 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 TMEM238C9JI98 176 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST1H2BKO60814 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST1H2BJP06899 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST1H2BOP23527 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST1H2BBP33778 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST1H2BDP58876 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 TSPEAR-AS2P59090 65 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST1H2BCP62807 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST2H2BEQ16778 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 FAM229BQ4G0N7 80 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.5□□□□□ -0.73
PTPN11-207ENST00000639857 FAM19A1Q7Z5A9 133 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 BOD1L2Q8IYS8 172 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST1H2BHQ93079 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST1H2BNQ99877 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 HIST1H2BMQ99879 126 aa10.5□□□□□ -0.73
PTPN11-207ENST00000639857 J3QQQ9 107 aa10.49□□□□□ -0.73
PTPN11-207ENST00000639857 PRLHP81277 87 aa10.49□□□□□ -0.73
PTPN11-207ENST00000639857 A0A087X002 238 aa10.48□□□□□ -0.73
PTPN11-207ENST00000639857 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
PTPN11-207ENST00000639857 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
PTPN11-207ENST00000639857 PRYO14603 147 aa10.47□□□□□ -0.73
PTPN11-207ENST00000639857 LGALS3P17931 250 aaKnown RBP10.47□□□□□ -0.73
PTPN11-207ENST00000639857 PMCHL2Q9BQD1 86 aa10.47□□□□□ -0.73
PTPN11-207ENST00000639857 TYMSOSQ8TAI1 123 aa10.45□□□□□ -0.74
PTPN11-207ENST00000639857 E9PLD3 99 aa10.44□□□□□ -0.74
PTPN11-207ENST00000639857 SYS1-DBNDD2H3BUS1 97 aa10.44□□□□□ -0.74
PTPN11-207ENST00000639857 KCNQ1DNQ9H478 68 aa10.44□□□□□ -0.74
PTPN11-207ENST00000639857 NCR3O14931 201 aa10.43□□□□□ -0.74
PTPN11-207ENST00000639857 SPRR1AP35321 89 aa10.43□□□□□ -0.74
PTPN11-207ENST00000639857 LINC00337Q8N6G1 96 aa10.43□□□□□ -0.74
PTPN11-207ENST00000639857 TRBV10-2A0A0K0K1G8 114 aa10.42□□□□□ -0.74
PTPN11-207ENST00000639857 S100A12P80511 92 aa10.42□□□□□ -0.74
PTPN11-207ENST00000639857 MIEN1Q9BRT3 115 aa10.42□□□□□ -0.74
PTPN11-207ENST00000639857 COA6Q5JTJ3 125 aaKnown RBP10.41□□□□□ -0.74
PTPN11-207ENST00000639857 LINC01545Q5VT33 79 aa10.41□□□□□ -0.74
PTPN11-207ENST00000639857 PET117Q6UWS5 81 aa10.41□□□□□ -0.74
PTPN11-207ENST00000639857 NDUFC2O95298 119 aa10.4□□□□□ -0.74
PTPN11-207ENST00000639857 HIGD2AQ9BW72 106 aa10.4□□□□□ -0.74
PTPN11-207ENST00000639857 SPANXB1Q9NS25 103 aaPredicted RBP10.4□□□□□ -0.74
PTPN11-207ENST00000639857 TRBV10-3A0A0K0K1G6 114 aa10.39□□□□□ -0.75
PTPN11-207ENST00000639857 CTAG1AP78358 180 aa10.39□□□□□ -0.75
PTPN11-207ENST00000639857 KRTAP13-2Q52LG2 175 aa10.39□□□□□ -0.75
PTPN11-207ENST00000639857 DAND5Q8N907 189 aa10.39□□□□□ -0.75
PTPN11-207ENST00000639857 ANAPC11Q9NYG5 84 aa10.39□□□□□ -0.75
PTPN11-207ENST00000639857 ZNF706Q9Y5V0 76 aaPredicted RBP10.39□□□□□ -0.75
PTPN11-207ENST00000639857 KRTAP4-16G5E9R7 235 aaPredicted RBP10.38□□□□□ -0.75
PTPN11-207ENST00000639857 A0A0J9YXY3 114 aa10.37□□□□□ -0.75
PTPN11-207ENST00000639857 ETDCA0A1B0GVM5 59 aa10.36□□□□□ -0.75
PTPN11-207ENST00000639857 DDTP30046 118 aa10.35□□□□□ -0.75
PTPN11-207ENST00000639857 SPRR4Q96PI1 79 aa10.35□□□□□ -0.75
PTPN11-207ENST00000639857 TIMM17BO60830 172 aa10.34□□□□□ -0.75
PTPN11-207ENST00000639857 LINC00304Q8N9R0 145 aa10.34□□□□□ -0.75
PTPN11-207ENST00000639857 TSPAN13O95857 204 aa10.33□□□□□ -0.76
PTPN11-207ENST00000639857 C3orf79P0CE67 100 aa10.33□□□□□ -0.76
PTPN11-207ENST00000639857 PRR4Q16378 134 aa10.33□□□□□ -0.76
PTPN11-207ENST00000639857 IGLV6-57P01721 117 aa10.32□□□□□ -0.76
PTPN11-207ENST00000639857 S100A7L2Q5SY68 101 aa10.31□□□□□ -0.76
PTPN11-207ENST00000639857 ADAMTSL4-AS1Q5T5F5 129 aa10.31□□□□□ -0.76
PTPN11-207ENST00000639857 SOSTDC1Q6X4U4 206 aa10.31□□□□□ -0.76
PTPN11-207ENST00000639857 CBY1Q9Y3M2 126 aa10.31□□□□□ -0.76
PTPN11-207ENST00000639857 C20orf202A1L168 122 aa10.3□□□□□ -0.76
PTPN11-207ENST00000639857 B5MCH6 92 aa10.3□□□□□ -0.76
PTPN11-207ENST00000639857 AKR1D1P51857 326 aa10.3□□□□□ -0.76
PTPN11-207ENST00000639857 SMCR5Q8TEV8 140 aa10.3□□□□□ -0.76
PTPN11-207ENST00000639857 LITAFQ99732 161 aa10.3□□□□□ -0.76
PTPN11-207ENST00000639857 LPAP08519 4548 aa10.29□□□□□ -0.76
PTPN11-207ENST00000639857 ZNF815PA8K554 130 aa10.29□□□□□ -0.76
PTPN11-207ENST00000639857 KRTDAPP60985 99 aa10.29□□□□□ -0.76
PTPN11-207ENST00000639857 Q6ZRX8 168 aa10.29□□□□□ -0.76
PTPN11-207ENST00000639857 LINC00483Q53H64 154 aa10.28□□□□□ -0.76
PTPN11-207ENST00000639857 SPANXCQ9NY87 97 aa10.28□□□□□ -0.76
PTPN11-207ENST00000639857 TRAV23DV6A0A075B6W5 121 aa10.27□□□□□ -0.77
PTPN11-207ENST00000639857 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms