RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SNRNP200O75643 2136 aaKnown RBP2.22□□□□□ -2.05
RFC1-217ENST00000639695 ZNF137PP52743 207 aa2.22□□□□□ -2.05
RFC1-217ENST00000639695 UBL5Q9BZL1 73 aa2.22□□□□□ -2.05
RFC1-217ENST00000639695 PROK2Q9HC23 129 aa2.22□□□□□ -2.05
RFC1-217ENST00000639695 MRPL36Q9P0J6 103 aaKnown RBP2.22□□□□□ -2.05
RFC1-217ENST00000639695 MYO7AQ13402 2215 aa2.22□□□□□ -2.05
RFC1-217ENST00000639695 COX6B1P14854 86 aa2.21□□□□□ -2.06
RFC1-217ENST00000639695 SPINT3P49223 89 aa2.21□□□□□ -2.06
RFC1-217ENST00000639695 NDUFA12Q9UI09 145 aa2.21□□□□□ -2.06
RFC1-217ENST00000639695 NDUFA3O95167 84 aa2.2□□□□□ -2.06
RFC1-217ENST00000639695 MUSTN1Q8IVN3 82 aa2.2□□□□□ -2.06
RFC1-217ENST00000639695 SPTSSBQ8NFR3 76 aa2.2□□□□□ -2.06
RFC1-217ENST00000639695 ZGRF1Q86YA3 2104 aa2.2□□□□□ -2.06
RFC1-217ENST00000639695 MUC6Q6W4X9 2439 aa2.19□□□□□ -2.06
RFC1-217ENST00000639695 COL4A6Q14031 1691 aa2.19□□□□□ -2.06
RFC1-217ENST00000639695 TRAV22A0A0B4J277 110 aa2.19□□□□□ -2.06
RFC1-217ENST00000639695 TRBV7-4A0A0J9YYF1 115 aa2.19□□□□□ -2.06
RFC1-217ENST00000639695 HCG22E2RYF7 251 aa2.19□□□□□ -2.06
RFC1-217ENST00000639695 H3BSH0 61 aa2.19□□□□□ -2.06
RFC1-217ENST00000639695 NDUFB1O75438 58 aa2.19□□□□□ -2.06
RFC1-217ENST00000639695 Q86TA4 180 aa2.19□□□□□ -2.06
RFC1-217ENST00000639695 FLG2Q5D862 2391 aaPredicted RBP2.18□□□□□ -2.06
RFC1-217ENST00000639695 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.18□□□□□ -2.06
RFC1-217ENST00000639695 A0A087WVE0 104 aa2.18□□□□□ -2.06
RFC1-217ENST00000639695 CHKB-CPT1BH3BT56 60 aa2.18□□□□□ -2.06
RFC1-217ENST00000639695 ARMS2P0C7Q2 107 aa2.18□□□□□ -2.06
RFC1-217ENST00000639695 SAA2P0DJI9 122 aaPredicted RBP2.18□□□□□ -2.06
RFC1-217ENST00000639695 C9orf116Q5BN46 136 aaPredicted RBP2.18□□□□□ -2.06
RFC1-217ENST00000639695 FAM74A4Q5TZK3 123 aa2.18□□□□□ -2.06
RFC1-217ENST00000639695 LINC00575Q6W349 94 aa2.18□□□□□ -2.06
RFC1-217ENST00000639695 TMEM14BQ9NUH8 114 aa2.18□□□□□ -2.06
RFC1-217ENST00000639695 TET1Q8NFU7 2136 aa2.18□□□□□ -2.06
RFC1-217ENST00000639695 TRBV10-1A0A0K0K1A3 114 aa2.17□□□□□ -2.06
RFC1-217ENST00000639695 I3L3M4 83 aa2.17□□□□□ -2.06
RFC1-217ENST00000639695 M0R1W7 72 aa2.17□□□□□ -2.06
RFC1-217ENST00000639695 ELOF1P60002 83 aaKnown RBP2.17□□□□□ -2.06
RFC1-217ENST00000639695 NREPQ16612 68 aa2.17□□□□□ -2.06
RFC1-217ENST00000639695 BPESC1Q9GZL8 116 aa2.17□□□□□ -2.06
RFC1-217ENST00000639695 ASCC3Q8N3C0 2202 aaKnown RBP2.17□□□□□ -2.06
RFC1-217ENST00000639695 COL6A6A6NMZ7 2263 aa2.16□□□□□ -2.06
RFC1-217ENST00000639695 HELZ2Q9BYK8 2649 aaKnown RBP2.16□□□□□ -2.06
RFC1-217ENST00000639695 IGIPA6NJ69 53 aa2.16□□□□□ -2.06
RFC1-217ENST00000639695 H0YGX0 51 aa2.16□□□□□ -2.06
RFC1-217ENST00000639695 Q5VV11 94 aa2.16□□□□□ -2.06
RFC1-217ENST00000639695 C10orf113Q5VZT2 155 aa2.16□□□□□ -2.06
RFC1-217ENST00000639695 ENHOQ6UWT2 76 aa2.16□□□□□ -2.06
RFC1-217ENST00000639695 SMIM2Q9BVW6 85 aa2.16□□□□□ -2.06
RFC1-217ENST00000639695 CNFNQ9BYD5 112 aa2.16□□□□□ -2.06
RFC1-217ENST00000639695 LINC00846Q9NV44 126 aa2.16□□□□□ -2.06
RFC1-217ENST00000639695 TRAV21A0A0B4J279 112 aa2.15□□□□□ -2.07
RFC1-217ENST00000639695 CXorf51AA0A1B0GTR3 108 aa2.15□□□□□ -2.07
RFC1-217ENST00000639695 RPS27P42677 84 aaKnown RBP2.15□□□□□ -2.07
RFC1-217ENST00000639695 C10orf128Q5T292 105 aa2.15□□□□□ -2.07
RFC1-217ENST00000639695 Q6ZQY7 126 aa2.15□□□□□ -2.07
RFC1-217ENST00000639695 MUC22E2RYF6 1773 aaPredicted RBP2.15□□□□□ -2.07
RFC1-217ENST00000639695 TRAV12-3A0A0B4J271 114 aa2.14□□□□□ -2.07
RFC1-217ENST00000639695 LOC101927531A0A1B0GV80 90 aa2.14□□□□□ -2.07
RFC1-217ENST00000639695 PRB4P10163 310 aaPredicted RBP2.14□□□□□ -2.07
RFC1-217ENST00000639695 CDC42SE2Q9NRR3 84 aa2.14□□□□□ -2.07
RFC1-217ENST00000639695 GOLGA4Q13439 2230 aaKnown RBP2.14□□□□□ -2.07
RFC1-217ENST00000639695 PRR15LQ9BU68 103 aa2.13□□□□□ -2.07
RFC1-217ENST00000639695 DEFB114Q30KQ6 69 aa2.12□□□□□ -2.07
RFC1-217ENST00000639695 PIGYQ3MUY2 71 aa2.12□□□□□ -2.07
RFC1-217ENST00000639695 AMELXQ99217 191 aa2.12□□□□□ -2.07
RFC1-217ENST00000639695 SPTBP11277 2137 aa2.11□□□□□ -2.07
RFC1-217ENST00000639695 PRCDQ00LT1 54 aa2.11□□□□□ -2.07
RFC1-217ENST00000639695 WFDC9Q8NEX5 89 aa2.11□□□□□ -2.07
RFC1-217ENST00000639695 NDUFA4L2Q9NRX3 87 aa2.11□□□□□ -2.07
RFC1-217ENST00000639695 LENEPQ9Y5L5 61 aa2.11□□□□□ -2.07
RFC1-217ENST00000639695 SPAG17Q6Q759 2223 aa2.1□□□□□ -2.07
RFC1-217ENST00000639695 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
RFC1-217ENST00000639695 MED12Q93074 2177 aa2.09□□□□□ -2.07
RFC1-217ENST00000639695 LCE6AA0A183 80 aa2.09□□□□□ -2.07
RFC1-217ENST00000639695 NDUFA1O15239 70 aa2.09□□□□□ -2.07
RFC1-217ENST00000639695 HAMPP81172 84 aa2.09□□□□□ -2.07
RFC1-217ENST00000639695 DEFB132Q7Z7B7 95 aa2.09□□□□□ -2.07
RFC1-217ENST00000639695 MYO7BQ6PIF6 2116 aa2.09□□□□□ -2.08
RFC1-217ENST00000639695 ROS1P08922 2347 aa2.08□□□□□ -2.08
RFC1-217ENST00000639695 SPINK9Q5DT21 86 aa2.08□□□□□ -2.08
RFC1-217ENST00000639695 COX7B2Q8TF08 81 aa2.08□□□□□ -2.08
RFC1-217ENST00000639695 CCL19Q99731 98 aa2.08□□□□□ -2.08
RFC1-217ENST00000639695 OTOGLQ3ZCN5 2332 aa2.07□□□□□ -2.08
RFC1-217ENST00000639695 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
RFC1-217ENST00000639695 SPAG11BQ08648 103 aa2.07□□□□□ -2.08
RFC1-217ENST00000639695 SPAG11AQ6PDA7 123 aa2.07□□□□□ -2.08
RFC1-217ENST00000639695 FDCSPQ8NFU4 85 aa2.07□□□□□ -2.08
RFC1-217ENST00000639695 LINC00308Q8TCZ7 52 aa2.07□□□□□ -2.08
RFC1-217ENST00000639695 LINC01558Q9Y6Z2 57 aa2.07□□□□□ -2.08
RFC1-217ENST00000639695 BPTFQ12830 3046 aa2.06□□□□□ -2.08
RFC1-217ENST00000639695 H0Y9P7 68 aa2.06□□□□□ -2.08
RFC1-217ENST00000639695 NDUFA4O00483 81 aa2.06□□□□□ -2.08
RFC1-217ENST00000639695 CACNA1CQ13936 2221 aa2.06□□□□□ -2.08
RFC1-217ENST00000639695 ETDCA0A1B0GVM5 59 aa2.05□□□□□ -2.08
RFC1-217ENST00000639695 TFF1P04155 84 aa2.05□□□□□ -2.08
RFC1-217ENST00000639695 CRIP1P50238 77 aa2.05□□□□□ -2.08
RFC1-217ENST00000639695 GAFA1Q96PS6 74 aa2.05□□□□□ -2.08
RFC1-217ENST00000639695 NBDYA0A0U1RRE5 68 aa2.04□□□□□ -2.08
RFC1-217ENST00000639695 MGPP08493 103 aa2.04□□□□□ -2.08
RFC1-217ENST00000639695 CNTRLQ7Z7A1 2325 aa2.04□□□□□ -2.08
RFC1-217ENST00000639695 C10orf142B7Z368 130 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 225.6 ms