RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 LINC00474Q9P2X8 69 aa9.53□□□□□ -0.88
SCARB2-215ENST00000639145 LINC00315P59091 139 aa9.53□□□□□ -0.88
SCARB2-215ENST00000639145 NTM-AS1Q6ZSK4 140 aa9.53□□□□□ -0.88
SCARB2-215ENST00000639145 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
SCARB2-215ENST00000639145 MDFIQ99750 246 aa9.53□□□□□ -0.88
SCARB2-215ENST00000639145 HRCT1Q6UXD1 115 aa9.52□□□□□ -0.88
SCARB2-215ENST00000639145 C3orf84H3BNL1 204 aa9.52□□□□□ -0.89
SCARB2-215ENST00000639145 TRBV10-3A0A0K0K1G6 114 aa9.52□□□□□ -0.89
SCARB2-215ENST00000639145 FBN2P35556 2912 aa9.51□□□□□ -0.89
SCARB2-215ENST00000639145 IGLV9-49A0A0B4J1Y8 123 aa9.51□□□□□ -0.89
SCARB2-215ENST00000639145 NIPBLQ6KC79 2804 aaeCLIP9.51□□□□□ -0.89
SCARB2-215ENST00000639145 FAM236AA0A1B0GUQ0 79 aa9.5□□□□□ -0.89
SCARB2-215ENST00000639145 FAM236BA0A1B0GV22 79 aa9.5□□□□□ -0.89
SCARB2-215ENST00000639145 ADAMTSL4-AS1Q5T5F5 129 aa9.5□□□□□ -0.89
SCARB2-215ENST00000639145 KRTAP1-3Q8IUG1 177 aa9.5□□□□□ -0.89
SCARB2-215ENST00000639145 APCP25054 2843 aa9.49□□□□□ -0.89
SCARB2-215ENST00000639145 Q6ZRU5 148 aa9.49□□□□□ -0.89
SCARB2-215ENST00000639145 DHRS4-AS1Q9P1J3 65 aa9.49□□□□□ -0.89
SCARB2-215ENST00000639145 NDUFC2-KCTD14E9PQ53 114 aa9.48□□□□□ -0.89
SCARB2-215ENST00000639145 MP68P56378 58 aa9.48□□□□□ -0.89
SCARB2-215ENST00000639145 Q8NAQ8 132 aa9.47□□□□□ -0.89
SCARB2-215ENST00000639145 Q8N3U1 123 aa9.46□□□□□ -0.89
SCARB2-215ENST00000639145 MUC7Q8TAX7 377 aa9.46□□□□□ -0.89
SCARB2-215ENST00000639145 LST1O00453 97 aa9.45□□□□□ -0.9
SCARB2-215ENST00000639145 HRNRQ86YZ3 2850 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-215ENST00000639145 LINC01556Q5JQF7 62 aa9.45□□□□□ -0.9
SCARB2-215ENST00000639145 HIVEP1P15822 2718 aa9.45□□□□□ -0.9
SCARB2-215ENST00000639145 KLK9Q2XQG4 91 aa9.44□□□□□ -0.9
SCARB2-215ENST00000639145 IGHV3OR16-9A0A0B4J2B5 98 aa9.44□□□□□ -0.9
SCARB2-215ENST00000639145 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
SCARB2-215ENST00000639145 KRTAP1-1Q07627 177 aa9.44□□□□□ -0.9
SCARB2-215ENST00000639145 LINC00643Q86TS7 51 aa9.44□□□□□ -0.9
SCARB2-215ENST00000639145 ZNF706Q9Y5V0 76 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-215ENST00000639145 SDIM1Q6ZPB5 146 aa9.43□□□□□ -0.9
SCARB2-215ENST00000639145 RPL28P46779 137 aaKnown RBP9.43□□□□□ -0.9
SCARB2-215ENST00000639145 IGKV4-1P06312 121 aa9.43□□□□□ -0.9
SCARB2-215ENST00000639145 C2orf48Q96LS8 159 aa9.43□□□□□ -0.9
SCARB2-215ENST00000639145 CUBNO60494 3623 aa9.42□□□□□ -0.9
SCARB2-215ENST00000639145 A8MTW9 85 aa9.42□□□□□ -0.9
SCARB2-215ENST00000639145 C1orf137Q5JT78 98 aa9.41□□□□□ -0.9
SCARB2-215ENST00000639145 UPK3BQ9BT76 320 aa9.41□□□□□ -0.9
SCARB2-215ENST00000639145 K7EIL1 84 aa9.41□□□□□ -0.9
SCARB2-215ENST00000639145 REG3GQ6UW15 175 aa9.41□□□□□ -0.9
SCARB2-215ENST00000639145 ATOX1O00244 68 aa9.4□□□□□ -0.9
SCARB2-215ENST00000639145 KRTAP10-11P60412 298 aa9.4□□□□□ -0.9
SCARB2-215ENST00000639145 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-215ENST00000639145 B5MCH6 92 aa9.39□□□□□ -0.91
SCARB2-215ENST00000639145 NDUFV3P56181 108 aaKnown RBP9.39□□□□□ -0.91
SCARB2-215ENST00000639145 MRPL55Q7Z7F7 128 aaKnown RBP9.39□□□□□ -0.91
SCARB2-215ENST00000639145 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
SCARB2-215ENST00000639145 LINC00588Q9Y4M8 146 aa9.38□□□□□ -0.91
SCARB2-215ENST00000639145 CIRBP-AS1Q8TBR5 109 aa9.37□□□□□ -0.91
SCARB2-215ENST00000639145 PRLHP81277 87 aa9.37□□□□□ -0.91
SCARB2-215ENST00000639145 SVEP1Q4LDE5 3571 aa9.36□□□□□ -0.91
SCARB2-215ENST00000639145 SPATA3Q8NHX4 192 aa9.36□□□□□ -0.91
SCARB2-215ENST00000639145 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
SCARB2-215ENST00000639145 SS18L2Q9UHA2 77 aa9.36□□□□□ -0.91
SCARB2-215ENST00000639145 H3BNG1 76 aa9.36□□□□□ -0.91
SCARB2-215ENST00000639145 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
SCARB2-215ENST00000639145 MT-ATP8P03928 68 aa9.34□□□□□ -0.91
SCARB2-215ENST00000639145 C10orf25Q5T742 122 aa9.34□□□□□ -0.91
SCARB2-215ENST00000639145 Q8N814 137 aa9.34□□□□□ -0.91
SCARB2-215ENST00000639145 WWC2-AS2Q96NR7 200 aa9.34□□□□□ -0.91
SCARB2-215ENST00000639145 A0A087WYN8 130 aa9.34□□□□□ -0.91
SCARB2-215ENST00000639145 IGLV5-39A0A0G2JS06 123 aa9.34□□□□□ -0.91
SCARB2-215ENST00000639145 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.91
SCARB2-215ENST00000639145 CSNK1G2-AS1Q8NCQ2 148 aa9.34□□□□□ -0.91
SCARB2-215ENST00000639145 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
SCARB2-215ENST00000639145 NBDYA0A0U1RRE5 68 aa9.33□□□□□ -0.92
SCARB2-215ENST00000639145 C19orf73Q9NVV2 129 aa9.33□□□□□ -0.92
SCARB2-215ENST00000639145 CSMD1Q96PZ7 3565 aa9.32□□□□□ -0.92
SCARB2-215ENST00000639145 LINC01561Q8N1V8 128 aa9.32□□□□□ -0.92
SCARB2-215ENST00000639145 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
SCARB2-215ENST00000639145 NDUFC2O95298 119 aa9.31□□□□□ -0.92
SCARB2-215ENST00000639145 CELSR1Q9NYQ6 3014 aa9.31□□□□□ -0.92
SCARB2-215ENST00000639145 F8WDY8 70 aa9.31□□□□□ -0.92
SCARB2-215ENST00000639145 GIG44P09565 113 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-215ENST00000639145 C20orf197Q8N268 126 aa9.3□□□□□ -0.92
SCARB2-215ENST00000639145 Q9BRP9 147 aa9.28□□□□□ -0.92
SCARB2-215ENST00000639145 KMT2BQ9UMN6 2715 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-215ENST00000639145 SMIM20Q8N5G0 67 aa9.27□□□□□ -0.93
SCARB2-215ENST00000639145 CR1P17927 2039 aa9.26□□□□□ -0.93
SCARB2-215ENST00000639145 PRYO14603 147 aa9.26□□□□□ -0.93
SCARB2-215ENST00000639145 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
SCARB2-215ENST00000639145 C5orf47Q569G3 176 aa9.25□□□□□ -0.93
SCARB2-215ENST00000639145 ATP5EP2Q5VTU8 51 aa9.25□□□□□ -0.93
SCARB2-215ENST00000639145 LINC01546A6NGU7 62 aa9.25□□□□□ -0.93
SCARB2-215ENST00000639145 SMCR5Q8TEV8 140 aa9.25□□□□□ -0.93
SCARB2-215ENST00000639145 A0A087WSZ3 146 aa9.25□□□□□ -0.93
SCARB2-215ENST00000639145 MXRA5Q9NR99 2828 aa9.24□□□□□ -0.93
SCARB2-215ENST00000639145 CHTF8P0CG12 524 aa9.24□□□□□ -0.93
SCARB2-215ENST00000639145 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
SCARB2-215ENST00000639145 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
SCARB2-215ENST00000639145 CASC2Q6XLA1 102 aa9.23□□□□□ -0.93
SCARB2-215ENST00000639145 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
SCARB2-215ENST00000639145 TMEM258P61165 79 aa9.22□□□□□ -0.93
SCARB2-215ENST00000639145 RTL8CO15255 209 aa9.22□□□□□ -0.93
SCARB2-215ENST00000639145 DEFB116Q30KQ4 102 aa9.22□□□□□ -0.93
SCARB2-215ENST00000639145 SOSTDC1Q6X4U4 206 aa9.22□□□□□ -0.93
SCARB2-215ENST00000639145 DNAH10OSP0CZ25 163 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms