RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 APOC4P55056 127 aa13.68□□□□□ -0.22
SYNGAP1-227ENST00000638142 LINC00575Q6W349 94 aa13.67□□□□□ -0.22
SYNGAP1-227ENST00000638142 SPAG11BQ08648 103 aa13.67□□□□□ -0.22
SYNGAP1-227ENST00000638142 LYPD5Q6UWN5 251 aa13.67□□□□□ -0.22
SYNGAP1-227ENST00000638142 CYSRT1A8MQ03 144 aa13.66□□□□□ -0.22
SYNGAP1-227ENST00000638142 A0A0J9YWU9 116 aa13.65□□□□□ -0.22
SYNGAP1-227ENST00000638142 IGHV4-30-4P0DP06 118 aa13.65□□□□□ -0.22
SYNGAP1-227ENST00000638142 LELP1Q5T871 98 aa13.65□□□□□ -0.22
SYNGAP1-227ENST00000638142 UNQ6190/PRO20217Q6UXQ8 127 aa13.65□□□□□ -0.22
SYNGAP1-227ENST00000638142 C10orf25Q5T742 122 aa13.64□□□□□ -0.23
SYNGAP1-227ENST00000638142 FAM19A5Q7Z5A7 132 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-227ENST00000638142 NBEAL2Q6ZNJ1 2754 aa13.63□□□□□ -0.23
SYNGAP1-227ENST00000638142 C6orf223Q8N319 242 aa13.63□□□□□ -0.23
SYNGAP1-227ENST00000638142 MIFP14174 115 aa13.63□□□□□ -0.23
SYNGAP1-227ENST00000638142 Q8NAQ8 132 aa13.63□□□□□ -0.23
SYNGAP1-227ENST00000638142 SPATA3Q8NHX4 192 aa13.63□□□□□ -0.23
SYNGAP1-227ENST00000638142 CELA1Q9UNI1 258 aa13.63□□□□□ -0.23
SYNGAP1-227ENST00000638142 TRBV10-3A0A0K0K1G6 114 aa13.62□□□□□ -0.23
SYNGAP1-227ENST00000638142 IGLV6-57P01721 117 aa13.61□□□□□ -0.23
SYNGAP1-227ENST00000638142 SMR3AQ99954 134 aa13.61□□□□□ -0.23
SYNGAP1-227ENST00000638142 UBL5Q9BZL1 73 aa13.61□□□□□ -0.23
SYNGAP1-227ENST00000638142 PRR34Q9NV39 138 aa13.61□□□□□ -0.23
SYNGAP1-227ENST00000638142 ZNF561-AS1K7EIQ3 104 aa13.61□□□□□ -0.23
SYNGAP1-227ENST00000638142 DPH3Q96FX2 82 aa13.61□□□□□ -0.23
SYNGAP1-227ENST00000638142 HIVEP2P31629 2446 aa13.6□□□□□ -0.23
SYNGAP1-227ENST00000638142 SPART-AS1P0CW21 52 aa13.59□□□□□ -0.23
SYNGAP1-227ENST00000638142 RBM3P98179 157 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-227ENST00000638142 GVQW2A0A096LPI5 108 aaPredicted RBP13.58□□□□□ -0.23
SYNGAP1-227ENST00000638142 LOC110117498A0A087WWA1 95 aa13.57□□□□□ -0.24
SYNGAP1-227ENST00000638142 GHRHP01286 108 aa13.57□□□□□ -0.24
SYNGAP1-227ENST00000638142 Q6ZQT0 140 aa13.57□□□□□ -0.24
SYNGAP1-227ENST00000638142 KLK12Q9UKR0 248 aa13.57□□□□□ -0.24
SYNGAP1-227ENST00000638142 ENHOQ6UWT2 76 aa13.57□□□□□ -0.24
SYNGAP1-227ENST00000638142 FAM19A1Q7Z5A9 133 aa13.57□□□□□ -0.24
SYNGAP1-227ENST00000638142 WFDC9Q8NEX5 89 aa13.56□□□□□ -0.24
SYNGAP1-227ENST00000638142 H3BQ85 93 aa13.56□□□□□ -0.24
SYNGAP1-227ENST00000638142 HTN3P15516 51 aa13.56□□□□□ -0.24
SYNGAP1-227ENST00000638142 TRAV23DV6A0A075B6W5 121 aa13.55□□□□□ -0.24
SYNGAP1-227ENST00000638142 LAMTOR3Q9UHA4 124 aa13.55□□□□□ -0.24
SYNGAP1-227ENST00000638142 NDUFC2-KCTD14E9PQ53 114 aa13.53□□□□□ -0.24
SYNGAP1-227ENST00000638142 C5orf47Q569G3 176 aa13.52□□□□□ -0.25
SYNGAP1-227ENST00000638142 Q6ZQY7 126 aa13.51□□□□□ -0.25
SYNGAP1-227ENST00000638142 C6orf48Q9UBA6 75 aa13.51□□□□□ -0.25
SYNGAP1-227ENST00000638142 VWFP04275 2813 aa13.51□□□□□ -0.25
SYNGAP1-227ENST00000638142 DSCR8Q96T75 97 aa13.51□□□□□ -0.25
SYNGAP1-227ENST00000638142 PDE6GP18545 87 aa13.5□□□□□ -0.25
SYNGAP1-227ENST00000638142 DIRC1Q969H9 104 aa13.5□□□□□ -0.25
SYNGAP1-227ENST00000638142 BCE1O60756 84 aa13.5□□□□□ -0.25
SYNGAP1-227ENST00000638142 OXTP01178 125 aa13.48□□□□□ -0.25
SYNGAP1-227ENST00000638142 XAGE1AQ9HD64 81 aa13.47□□□□□ -0.25
SYNGAP1-227ENST00000638142 ZNF73O43830 326 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-227ENST00000638142 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-227ENST00000638142 OTOGQ6ZRI0 2925 aa13.44□□□□□ -0.26
SYNGAP1-227ENST00000638142 TRBV7-6A0A0J9YX20 115 aa13.44□□□□□ -0.26
SYNGAP1-227ENST00000638142 M0R2N4 97 aa13.44□□□□□ -0.26
SYNGAP1-227ENST00000638142 COX7BP24311 80 aa13.44□□□□□ -0.26
SYNGAP1-227ENST00000638142 LINC01547P58512 204 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-227ENST00000638142 Q6ZVQ6 151 aa13.43□□□□□ -0.26
SYNGAP1-227ENST00000638142 C20orf197Q8N268 126 aa13.43□□□□□ -0.26
SYNGAP1-227ENST00000638142 TRAV7A0A075B6U4 112 aa13.42□□□□□ -0.26
SYNGAP1-227ENST00000638142 ELOF1P60002 83 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-227ENST00000638142 CAMK2N2Q96S95 79 aa13.41□□□□□ -0.26
SYNGAP1-227ENST00000638142 INAFM1C9JVW0 142 aa13.4□□□□□ -0.26
SYNGAP1-227ENST00000638142 VPREB1P12018 145 aa13.4□□□□□ -0.26
SYNGAP1-227ENST00000638142 EGFEM1PQ0D2K5 195 aa13.4□□□□□ -0.26
SYNGAP1-227ENST00000638142 WIPF1O43516 503 aa13.39□□□□□ -0.27
SYNGAP1-227ENST00000638142 TRBV7-4A0A0J9YYF1 115 aa13.39□□□□□ -0.27
SYNGAP1-227ENST00000638142 H3BNG1 76 aa13.39□□□□□ -0.27
SYNGAP1-227ENST00000638142 CXCL6P80162 114 aa13.39□□□□□ -0.27
SYNGAP1-227ENST00000638142 HAMPP81172 84 aa13.39□□□□□ -0.27
SYNGAP1-227ENST00000638142 HIGD2BQ4VC39 106 aa13.38□□□□□ -0.27
SYNGAP1-227ENST00000638142 KRTAP26-1Q6PEX3 210 aa13.37□□□□□ -0.27
SYNGAP1-227ENST00000638142 WFDC10BQ8IUB3 73 aa13.37□□□□□ -0.27
SYNGAP1-227ENST00000638142 M0R378 163 aa13.37□□□□□ -0.27
SYNGAP1-227ENST00000638142 TEP1Q99973 2627 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-227ENST00000638142 FAM236DA0A1B0GTK5 79 aa13.35□□□□□ -0.27
SYNGAP1-227ENST00000638142 FAM236CP0DP71 79 aa13.35□□□□□ -0.27
SYNGAP1-227ENST00000638142 KPRPQ5T749 579 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-227ENST00000638142 Q5XG85 94 aa13.34□□□□□ -0.27
SYNGAP1-227ENST00000638142 H7BZZ5 65 aa13.34□□□□□ -0.27
SYNGAP1-227ENST00000638142 Q6ZRU5 148 aa13.34□□□□□ -0.27
SYNGAP1-227ENST00000638142 TRAV10A0A0B4J240 114 aa13.33□□□□□ -0.28
SYNGAP1-227ENST00000638142 KLKP1Q107X0 134 aa13.33□□□□□ -0.28
SYNGAP1-227ENST00000638142 C15orf56Q8N910 161 aa13.33□□□□□ -0.28
SYNGAP1-227ENST00000638142 TENM1Q9UKZ4 2725 aa13.32□□□□□ -0.28
SYNGAP1-227ENST00000638142 LINC00528Q8N1L1 170 aa13.31□□□□□ -0.28
SYNGAP1-227ENST00000638142 EPM2AB3EWF7 344 aa13.3□□□□□ -0.28
SYNGAP1-227ENST00000638142 C4orf26Q17RF5 130 aa13.3□□□□□ -0.28
SYNGAP1-227ENST00000638142 HIVEP1P15822 2718 aa13.29□□□□□ -0.28
SYNGAP1-227ENST00000638142 NSD1Q96L73 2696 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-227ENST00000638142 F8WDY8 70 aa13.28□□□□□ -0.28
SYNGAP1-227ENST00000638142 SERP1Q9Y6X1 66 aa13.28□□□□□ -0.28
SYNGAP1-227ENST00000638142 C1orf43Q9BWL3 253 aa13.27□□□□□ -0.29
SYNGAP1-227ENST00000638142 F8P00451 2351 aa13.26□□□□□ -0.29
SYNGAP1-227ENST00000638142 Q6ZTC4 211 aa13.26□□□□□ -0.29
SYNGAP1-227ENST00000638142 Q6ZRP5 223 aa13.24□□□□□ -0.29
SYNGAP1-227ENST00000638142 RETNQ9HD89 108 aa13.24□□□□□ -0.29
SYNGAP1-227ENST00000638142 ESRGQ1W209 222 aa13.24□□□□□ -0.29
SYNGAP1-227ENST00000638142 ATRQ13535 2644 aa13.23□□□□□ -0.29
SYNGAP1-227ENST00000638142 LINC01556Q5JQF7 62 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms