RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 COL5A1P20908 1838 aaPredicted RBP1.66□□□□□ -2.14
VIM-210ENST00000637053 C4AP0C0L4 1744 aa1.66□□□□□ -2.14
VIM-210ENST00000637053 TOGARAM1Q9Y4F4 1720 aa1.66□□□□□ -2.14
VIM-210ENST00000637053 CACNA1AO00555 2505 aa1.65□□□□□ -2.15
VIM-210ENST00000637053 BRWD1Q9NSI6 2320 aa1.65□□□□□ -2.15
VIM-210ENST00000637053 LOC110117498A0A087WWA1 95 aa1.65□□□□□ -2.15
VIM-210ENST00000637053 H0YGX0 51 aa1.65□□□□□ -2.15
VIM-210ENST00000637053 IGLV6-57P01721 117 aa1.65□□□□□ -2.15
VIM-210ENST00000637053 HAMPP81172 84 aa1.65□□□□□ -2.15
VIM-210ENST00000637053 CEP192Q8TEP8 1941 aa1.64□□□□□ -2.15
VIM-210ENST00000637053 A0A1B0GU69 56 aa1.64□□□□□ -2.15
VIM-210ENST00000637053 ETDCA0A1B0GVM5 59 aa1.64□□□□□ -2.15
VIM-210ENST00000637053 H3BRN7 92 aa1.64□□□□□ -2.15
VIM-210ENST00000637053 ACYP2P14621 99 aa1.64□□□□□ -2.15
VIM-210ENST00000637053 COX7BP24311 80 aa1.64□□□□□ -2.15
VIM-210ENST00000637053 KCNQ1DNQ9H478 68 aa1.64□□□□□ -2.15
VIM-210ENST00000637053 TMEM167BQ9NRX6 74 aa1.64□□□□□ -2.15
VIM-210ENST00000637053 UNC79Q9P2D8 2635 aa1.63□□□□□ -2.15
VIM-210ENST00000637053 INE1O15225 51 aa1.63□□□□□ -2.15
VIM-210ENST00000637053 SEC16AO15027 2179 aa1.62□□□□□ -2.15
VIM-210ENST00000637053 PRRC2AP48634 2157 aaKnown RBP1.62□□□□□ -2.15
VIM-210ENST00000637053 FREM1Q5H8C1 2179 aa1.62□□□□□ -2.15
VIM-210ENST00000637053 TNCP24821 2201 aa1.62□□□□□ -2.15
VIM-210ENST00000637053 LMO7Q8WWI1 1683 aa1.62□□□□□ -2.15
VIM-210ENST00000637053 IGLV4-60A0A075B6I1 120 aa1.62□□□□□ -2.15
VIM-210ENST00000637053 NCR3O14931 201 aa1.62□□□□□ -2.15
VIM-210ENST00000637053 LINC00315P59091 139 aa1.62□□□□□ -2.15
VIM-210ENST00000637053 PKD1L2Q7Z442 2459 aa1.61□□□□□ -2.15
VIM-210ENST00000637053 M0R2N4 97 aa1.61□□□□□ -2.15
VIM-210ENST00000637053 PRB2P02812 416 aaPredicted RBP1.61□□□□□ -2.15
VIM-210ENST00000637053 KRTAP11-1Q8IUC1 163 aa1.61□□□□□ -2.15
VIM-210ENST00000637053 KMT2BQ9UMN6 2715 aaPredicted RBP1.61□□□□□ -2.15
VIM-210ENST00000637053 ALPK2Q86TB3 2170 aa1.61□□□□□ -2.15
VIM-210ENST00000637053 C4BP0C0L5 1744 aa1.6□□□□□ -2.15
VIM-210ENST00000637053 SRCAPQ6ZRS2 3230 aa1.6□□□□□ -2.15
VIM-210ENST00000637053 MED13LQ71F56 2210 aa1.59□□□□□ -2.15
VIM-210ENST00000637053 CPSF4LA6NMK7 179 aaKnown RBP1.59□□□□□ -2.15
VIM-210ENST00000637053 Q6ZQY7 126 aa1.59□□□□□ -2.15
VIM-210ENST00000637053 Q8N9L7 120 aa1.59□□□□□ -2.15
VIM-210ENST00000637053 F5P12259 2224 aa1.59□□□□□ -2.16
VIM-210ENST00000637053 ATRXP46100 2492 aa1.59□□□□□ -2.16
VIM-210ENST00000637053 COL4A2P08572 1712 aa1.58□□□□□ -2.16
VIM-210ENST00000637053 RTTNQ86VV8 2226 aa1.58□□□□□ -2.16
VIM-210ENST00000637053 IGKV2D-24A0A075B6R9 120 aa1.58□□□□□ -2.16
VIM-210ENST00000637053 CRIP1P50238 77 aa1.58□□□□□ -2.16
VIM-210ENST00000637053 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.58□□□□□ -2.16
VIM-210ENST00000637053 SSBP3-AS1Q7Z2R9 100 aa1.58□□□□□ -2.16
VIM-210ENST00000637053 CCL19Q99731 98 aa1.58□□□□□ -2.16
VIM-210ENST00000637053 PLXNB2O15031 1838 aa1.58□□□□□ -2.16
VIM-210ENST00000637053 GOLGA4Q13439 2230 aaKnown RBP1.58□□□□□ -2.16
VIM-210ENST00000637053 A0A0G2JMZ2 1700 aa1.57□□□□□ -2.16
VIM-210ENST00000637053 LRRC37A2A6NM11 1700 aa1.57□□□□□ -2.16
VIM-210ENST00000637053 LRRC37AA6NMS7 1700 aa1.57□□□□□ -2.16
VIM-210ENST00000637053 G3V318 75 aa1.57□□□□□ -2.16
VIM-210ENST00000637053 PRB1P04280 392 aa1.57□□□□□ -2.16
VIM-210ENST00000637053 RPL38P63173 70 aaKnown RBP1.57□□□□□ -2.16
VIM-210ENST00000637053 TFF3Q07654 80 aa1.57□□□□□ -2.16
VIM-210ENST00000637053 Q6ZRX8 168 aa1.57□□□□□ -2.16
VIM-210ENST00000637053 ADAMTS9Q9P2N4 1935 aa1.57□□□□□ -2.16
VIM-210ENST00000637053 DEFB131BA0A096LNP1 70 aa1.56□□□□□ -2.16
VIM-210ENST00000637053 MRPL33O75394 65 aaKnown RBP1.56□□□□□ -2.16
VIM-210ENST00000637053 LY6G6CO95867 125 aa1.56□□□□□ -2.16
VIM-210ENST00000637053 DSCR10P59022 87 aa1.56□□□□□ -2.16
VIM-210ENST00000637053 LINC00308Q8TCZ7 52 aa1.56□□□□□ -2.16
VIM-210ENST00000637053 PLAC4Q8WY50 150 aa1.56□□□□□ -2.16
VIM-210ENST00000637053 SHANK1Q9Y566 2161 aa1.56□□□□□ -2.16
VIM-210ENST00000637053 GVQW2A0A096LPI5 108 aaPredicted RBP1.55□□□□□ -2.16
VIM-210ENST00000637053 IAPPP10997 89 aa1.55□□□□□ -2.16
VIM-210ENST00000637053 LINC00158P58513 81 aa1.55□□□□□ -2.16
VIM-210ENST00000637053 KRTAP13-2Q52LG2 175 aa1.55□□□□□ -2.16
VIM-210ENST00000637053 Q6ZRN7 208 aaPredicted RBP1.55□□□□□ -2.16
VIM-210ENST00000637053 SMIM11BQ8TCY0 68 aa1.55□□□□□ -2.16
VIM-210ENST00000637053 ANAPC11Q9NYG5 84 aa1.55□□□□□ -2.16
VIM-210ENST00000637053 CACNA1CQ13936 2221 aa1.55□□□□□ -2.16
VIM-210ENST00000637053 ABCA1O95477 2261 aa1.55□□□□□ -2.16
VIM-210ENST00000637053 FN1P02751 2386 aaKnown RBP1.55□□□□□ -2.16
VIM-210ENST00000637053 IGKV2-28A0A075B6P5 120 aa1.54□□□□□ -2.16
VIM-210ENST00000637053 A0A096LNT2 108 aa1.54□□□□□ -2.16
VIM-210ENST00000637053 IGKV2D-28P01615 120 aa1.54□□□□□ -2.16
VIM-210ENST00000637053 SMIM2Q9BVW6 85 aa1.54□□□□□ -2.16
VIM-210ENST00000637053 SPTY2D1-AS1A0A0U1RR47 76 aa1.53□□□□□ -2.16
VIM-210ENST00000637053 ANGP03950 147 aaKnown RBP1.53□□□□□ -2.16
VIM-210ENST00000637053 C10orf99Q6UWK7 81 aa1.53□□□□□ -2.16
VIM-210ENST00000637053 RPS27LQ71UM5 84 aaKnown RBP1.53□□□□□ -2.16
VIM-210ENST00000637053 ARHGAP5-AS1Q96IT6 56 aa1.53□□□□□ -2.16
VIM-210ENST00000637053 CNFNQ9BYD5 112 aa1.53□□□□□ -2.16
VIM-210ENST00000637053 CDKN2A-AS1Q9UH64 79 aa1.53□□□□□ -2.16
VIM-210ENST00000637053 SSC5DA1L4H1 1573 aa1.52□□□□□ -2.17
VIM-210ENST00000637053 PRR9Q5T870 116 aa1.52□□□□□ -2.17
VIM-210ENST00000637053 Q8IZM0 81 aa1.52□□□□□ -2.17
VIM-210ENST00000637053 GPR179Q6PRD1 2367 aa1.52□□□□□ -2.17
VIM-210ENST00000637053 TECTAO75443 2155 aa1.51□□□□□ -2.17
VIM-210ENST00000637053 IGKV2-24A0A0C4DH68 120 aa1.51□□□□□ -2.17
VIM-210ENST00000637053 LOC730098B7Z3J9 87 aa1.51□□□□□ -2.17
VIM-210ENST00000637053 NDUFA1O15239 70 aa1.51□□□□□ -2.17
VIM-210ENST00000637053 CEP350Q5VT06 3117 aa1.51□□□□□ -2.17
VIM-210ENST00000637053 CACNA1GO43497 2377 aa1.51□□□□□ -2.17
VIM-210ENST00000637053 CADP27708 2225 aa1.51□□□□□ -2.17
VIM-210ENST00000637053 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
VIM-210ENST00000637053 PP632Q6XCG6 107 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms