RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 LEPROTO15243 131 aa10.47□□□□□ -0.73
LIN28B-202ENST00000635857 SYS1-DBNDD2H3BUS1 97 aa10.46□□□□□ -0.73
LIN28B-202ENST00000635857 LGALS3P17931 250 aaKnown RBP10.46□□□□□ -0.73
LIN28B-202ENST00000635857 SRSF9Q13242 221 aaKnown RBP eCLIP10.46□□□□□ -0.73
LIN28B-202ENST00000635857 DIRC1Q969H9 104 aa10.46□□□□□ -0.73
LIN28B-202ENST00000635857 IGLV5-37A0A075B6J1 123 aa10.45□□□□□ -0.74
LIN28B-202ENST00000635857 A0A0U1RRA0 63 aa10.45□□□□□ -0.74
LIN28B-202ENST00000635857 GAGE10A6NGK3 116 aa10.44□□□□□ -0.74
LIN28B-202ENST00000635857 J3QQQ9 107 aa10.44□□□□□ -0.74
LIN28B-202ENST00000635857 NMUP48645 174 aa10.44□□□□□ -0.74
LIN28B-202ENST00000635857 COA6Q5JTJ3 125 aaKnown RBP10.44□□□□□ -0.74
LIN28B-202ENST00000635857 PET117Q6UWS5 81 aa10.44□□□□□ -0.74
LIN28B-202ENST00000635857 KRTAP11-1Q8IUC1 163 aa10.44□□□□□ -0.74
LIN28B-202ENST00000635857 LINC00167Q96N53 147 aa10.44□□□□□ -0.74
LIN28B-202ENST00000635857 RPL37AP8A6NKH3 93 aa10.43□□□□□ -0.74
LIN28B-202ENST00000635857 SMIM13P0DJ93 91 aa10.43□□□□□ -0.74
LIN28B-202ENST00000635857 FAT3Q8TDW7 4589 aa10.42□□□□□ -0.74
LIN28B-202ENST00000635857 LRP1Q07954 4544 aaKnown RBP10.41□□□□□ -0.74
LIN28B-202ENST00000635857 C20orf202A1L168 122 aa10.41□□□□□ -0.74
LIN28B-202ENST00000635857 LINC01600Q96MT4 127 aa10.41□□□□□ -0.74
LIN28B-202ENST00000635857 TSPEAR-AS2P59090 65 aa10.4□□□□□ -0.74
LIN28B-202ENST00000635857 KRTDAPP60985 99 aa10.4□□□□□ -0.74
LIN28B-202ENST00000635857 LINC01545Q5VT33 79 aa10.4□□□□□ -0.74
LIN28B-202ENST00000635857 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
LIN28B-202ENST00000635857 HERC1Q15751 4861 aa10.39□□□□□ -0.75
LIN28B-202ENST00000635857 IGKV2-28A0A075B6P5 120 aa10.39□□□□□ -0.75
LIN28B-202ENST00000635857 H0Y9J4 135 aa10.39□□□□□ -0.75
LIN28B-202ENST00000635857 IGKV2D-28P01615 120 aa10.39□□□□□ -0.75
LIN28B-202ENST00000635857 VPREB1P12018 145 aa10.39□□□□□ -0.75
LIN28B-202ENST00000635857 E9PLD3 99 aa10.38□□□□□ -0.75
LIN28B-202ENST00000635857 BCE1O60756 84 aa10.38□□□□□ -0.75
LIN28B-202ENST00000635857 C3orf79P0CE67 100 aa10.38□□□□□ -0.75
LIN28B-202ENST00000635857 RPL28P46779 137 aaKnown RBP10.38□□□□□ -0.75
LIN28B-202ENST00000635857 BOD1L2Q8IYS8 172 aa10.38□□□□□ -0.75
LIN28B-202ENST00000635857 MIEN1Q9BRT3 115 aa10.38□□□□□ -0.75
LIN28B-202ENST00000635857 ZNF861PO60384 105 aa10.37□□□□□ -0.75
LIN28B-202ENST00000635857 S100A6P06703 90 aa10.36□□□□□ -0.75
LIN28B-202ENST00000635857 S100A2P29034 98 aa10.36□□□□□ -0.75
LIN28B-202ENST00000635857 UBE2AP49459 152 aa10.36□□□□□ -0.75
LIN28B-202ENST00000635857 AKR1D1P51857 326 aa10.36□□□□□ -0.75
LIN28B-202ENST00000635857 IGLV1-50A0A075B6I6 118 aa10.34□□□□□ -0.75
LIN28B-202ENST00000635857 M0R378 163 aa10.34□□□□□ -0.75
LIN28B-202ENST00000635857 MT1HL1P0DM35 61 aa10.34□□□□□ -0.75
LIN28B-202ENST00000635857 S100A12P80511 92 aa10.33□□□□□ -0.76
LIN28B-202ENST00000635857 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
LIN28B-202ENST00000635857 NCR3O14931 201 aa10.32□□□□□ -0.76
LIN28B-202ENST00000635857 DAND5Q8N907 189 aa10.32□□□□□ -0.76
LIN28B-202ENST00000635857 FAM19A1Q7Z5A9 133 aa10.31□□□□□ -0.76
LIN28B-202ENST00000635857 TMEM126AQ9H061 195 aa10.31□□□□□ -0.76
LIN28B-202ENST00000635857 A0A0J9YXY3 114 aa10.3□□□□□ -0.76
LIN28B-202ENST00000635857 Q8NDZ9 215 aa10.3□□□□□ -0.76
LIN28B-202ENST00000635857 ZNF815PA8K554 130 aa10.29□□□□□ -0.76
LIN28B-202ENST00000635857 TMEM238C9JI98 176 aa10.28□□□□□ -0.76
LIN28B-202ENST00000635857 RPL13AP40429 203 aaKnown RBP10.27□□□□□ -0.77
LIN28B-202ENST00000635857 HIST3H2BBQ8N257 126 aa10.27□□□□□ -0.77
LIN28B-202ENST00000635857 LOC107984156A0A0G2JMH3 177 aa10.26□□□□□ -0.77
LIN28B-202ENST00000635857 PRYO14603 147 aa10.26□□□□□ -0.77
LIN28B-202ENST00000635857 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
LIN28B-202ENST00000635857 ARL17AQ8IVW1 177 aa10.26□□□□□ -0.77
LIN28B-202ENST00000635857 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
LIN28B-202ENST00000635857 NPC2P61916 151 aa10.25□□□□□ -0.77
LIN28B-202ENST00000635857 PRLHP81277 87 aa10.25□□□□□ -0.77
LIN28B-202ENST00000635857 SCGB1D4Q6XE38 83 aa10.25□□□□□ -0.77
LIN28B-202ENST00000635857 ATOH7Q8N100 152 aa10.25□□□□□ -0.77
LIN28B-202ENST00000635857 PRR26Q8N8Z3 221 aa10.25□□□□□ -0.77
LIN28B-202ENST00000635857 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
LIN28B-202ENST00000635857 TIMM17BO60830 172 aa10.24□□□□□ -0.77
LIN28B-202ENST00000635857 NDUFC2O95298 119 aa10.24□□□□□ -0.77
LIN28B-202ENST00000635857 S100A7L2Q5SY68 101 aa10.24□□□□□ -0.77
LIN28B-202ENST00000635857 HIST1H2BLQ99880 126 aa10.24□□□□□ -0.77
LIN28B-202ENST00000635857 DDTP30046 118 aa10.23□□□□□ -0.77
LIN28B-202ENST00000635857 SNRPEP62304 92 aaKnown RBP10.23□□□□□ -0.77
LIN28B-202ENST00000635857 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
LIN28B-202ENST00000635857 ETDCA0A1B0GVM5 59 aa10.22□□□□□ -0.77
LIN28B-202ENST00000635857 HSBP1L1C9JCN9 74 aa10.22□□□□□ -0.77
LIN28B-202ENST00000635857 KRTAP1-4P0C5Y4 121 aa10.22□□□□□ -0.77
LIN28B-202ENST00000635857 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
LIN28B-202ENST00000635857 ADAMTSL4-AS1Q5T5F5 129 aa10.21□□□□□ -0.77
LIN28B-202ENST00000635857 HIGD2AQ9BW72 106 aa10.21□□□□□ -0.77
LIN28B-202ENST00000635857 KCNQ1DNQ9H478 68 aa10.21□□□□□ -0.77
LIN28B-202ENST00000635857 COPS9Q8WXC6 57 aa10.2□□□□□ -0.78
LIN28B-202ENST00000635857 TTTY13Q9BZ97 58 aa10.2□□□□□ -0.78
LIN28B-202ENST00000635857 CBY1Q9Y3M2 126 aa10.2□□□□□ -0.78
LIN28B-202ENST00000635857 CRYGAP11844 174 aa10.19□□□□□ -0.78
LIN28B-202ENST00000635857 ANKRD39Q53RE8 183 aa10.19□□□□□ -0.78
LIN28B-202ENST00000635857 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
LIN28B-202ENST00000635857 LINC00308Q8TCZ7 52 aa10.19□□□□□ -0.78
LIN28B-202ENST00000635857 SPANXCQ9NY87 97 aa10.19□□□□□ -0.78
LIN28B-202ENST00000635857 TNXBP22105 4242 aa10.18□□□□□ -0.78
LIN28B-202ENST00000635857 SOSTDC1Q6X4U4 206 aa10.17□□□□□ -0.78
LIN28B-202ENST00000635857 LITAFQ99732 161 aa10.17□□□□□ -0.78
LIN28B-202ENST00000635857 ZNF706Q9Y5V0 76 aaPredicted RBP10.16□□□□□ -0.78
LIN28B-202ENST00000635857 TRAV23DV6A0A075B6W5 121 aa10.15□□□□□ -0.78
LIN28B-202ENST00000635857 SCGB1D1O95968 90 aa10.15□□□□□ -0.78
LIN28B-202ENST00000635857 SPRR1AP35321 89 aa10.15□□□□□ -0.78
LIN28B-202ENST00000635857 FAM229BQ4G0N7 80 aa10.14□□□□□ -0.79
LIN28B-202ENST00000635857 OR13C6PQ8NH95 151 aa10.14□□□□□ -0.79
LIN28B-202ENST00000635857 SPANXDQ9BXN6 97 aa10.14□□□□□ -0.79
LIN28B-202ENST00000635857 C5orf52A6NGY3 159 aa10.13□□□□□ -0.79
LIN28B-202ENST00000635857 IGLV6-57P01721 117 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms