RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MUSTN1Q8IVN3 82 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 MTURNQ8N3F0 131 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 TRBV20-1A0A075B6N2 111 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 K7EQD1 137 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 TIMM17BO60830 172 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 DAZ2Q13117 558 aaKnown RBP3.26□□□□□ -1.89
LINC00550-201ENST00000629293 CSDC2Q9Y534 153 aaKnown RBP3.26□□□□□ -1.89
LINC00550-201ENST00000629293 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.26□□□□□ -1.89
LINC00550-201ENST00000629293 M0QXV9 152 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 LINC01600Q96MT4 127 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 NDUFA12Q9UI09 145 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 LOC107984156A0A0G2JMH3 177 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 SPINK8P0C7L1 97 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 PSMB2P49721 201 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 MIAQ16674 131 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 ADAMTSL4-AS1Q5T5F5 129 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 NTM-AS1Q6ZSK4 140 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 ARL17AQ8IVW1 177 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 J3QR89 54 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 NDUFA1O15239 70 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 LINC00694P0DN24 101 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 DAZ4Q86SG3 579 aaKnown RBP3.25□□□□□ -1.89
LINC00550-201ENST00000629293 DAZ3Q9NR90 486 aaKnown RBP3.25□□□□□ -1.89
LINC00550-201ENST00000629293 CDKN2A-AS1Q9UH64 79 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 PSCAO43653 123 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 COX6A2Q02221 97 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 GAGE5Q13069 117 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 GAGE6Q13070 117 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 LINC00242Q5T6M2 205 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 SFTA2Q6UW10 78 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 TMEM101Q96IK0 257 aa3.25□□□□□ -1.89
LINC00550-201ENST00000629293 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 KRTAP10-1P60331 282 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 RPL36AP83881 106 aaKnown RBP3.24□□□□□ -1.89
LINC00550-201ENST00000629293 RPL36ALQ969Q0 106 aaKnown RBP3.24□□□□□ -1.89
LINC00550-201ENST00000629293 GTSF1LQ9H1H1 148 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 GEMIN7Q9H840 131 aaKnown RBP3.24□□□□□ -1.89
LINC00550-201ENST00000629293 Q9HAA7 133 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 ERG28Q9UKR5 140 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 A0A087WZ39 114 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 TRBV30A0A0K0K1B3 111 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 SLPIP03973 132 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 XGP55808 180 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 HERVK_113P63121 156 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 TEN1Q86WV5 123 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 CARD19Q96LW7 228 aa3.24□□□□□ -1.89
LINC00550-201ENST00000629293 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 CIDEAO60543 219 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 IFITM1P13164 125 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 CDC42SE2Q9NRR3 84 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 ICOSQ9Y6W8 199 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 TRGV4A0A0C4DH28 118 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 TRBV6-4A0A1B0GX49 114 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 SCGB1A1P11684 91 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 PPDPFLQ8WWR9 84 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 PPDPFQ9H3Y8 114 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 H7C423 109 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 WFDC10BQ8IUB3 73 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 ANKRD29Q8N6D5 301 aa3.23□□□□□ -1.89
LINC00550-201ENST00000629293 ZNF625Q96I27 306 aaPredicted RBP3.23□□□□□ -1.89
LINC00550-201ENST00000629293 A0A087WTM6 91 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 SMAGPQ0VAQ4 97 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 LINC00612Q8N6U2 182 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 SIGMAR1Q99720 223 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 SLC25A20O43772 301 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 SCGB1C2P0DMR2 95 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 UPK3BQ9BT76 320 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 TMEM243Q9BU79 118 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 LOC100131303A0A0U1RQF7 123 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 LECT2O14960 151 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 ATXN8Q156A1 80 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 MRPL23Q16540 153 aaKnown RBP3.22□□□□□ -1.89
LINC00550-201ENST00000629293 Q6ZRN7 208 aaPredicted RBP3.22□□□□□ -1.89
LINC00550-201ENST00000629293 PRO0255Q9UI72 69 aa3.22□□□□□ -1.89
LINC00550-201ENST00000629293 C9JAW5 83 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 H7C2G1 150 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 LINC00308Q8TCZ7 52 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 C2orf48Q96LS8 159 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 PRSS2P07478 247 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 Q1RN00 199 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 LYPD5Q6UWN5 251 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 SOSTDC1Q6X4U4 206 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.21□□□□□ -1.9
LINC00550-201ENST00000629293 TRAV13-1A0A0B4J241 112 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 TRBV10-2A0A0K0K1G8 114 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 RPL13AP40429 203 aaKnown RBP3.21□□□□□ -1.9
LINC00550-201ENST00000629293 DAND5Q8N907 189 aa3.21□□□□□ -1.9
LINC00550-201ENST00000629293 LST1O00453 97 aa3.2□□□□□ -1.9
LINC00550-201ENST00000629293 NPC2P61916 151 aa3.2□□□□□ -1.9
LINC00550-201ENST00000629293 CIRBPQ14011 172 aaKnown RBP3.2□□□□□ -1.9
LINC00550-201ENST00000629293 TRBV6-8A0A0A6YYG3 113 aa3.2□□□□□ -1.9
LINC00550-201ENST00000629293 H3BNG1 76 aa3.2□□□□□ -1.9
LINC00550-201ENST00000629293 UBE2L6O14933 153 aa3.2□□□□□ -1.9
LINC00550-201ENST00000629293 H3BT86 120 aa3.19□□□□□ -1.9
LINC00550-201ENST00000629293 IGLV4-60A0A075B6I1 120 aa3.19□□□□□ -1.9
LINC00550-201ENST00000629293 Q6ZVQ6 151 aa3.19□□□□□ -1.9
LINC00550-201ENST00000629293 COPS9Q8WXC6 57 aa3.19□□□□□ -1.9
LINC00550-201ENST00000629293 LRP1Q07954 4544 aaKnown RBP3.19□□□□□ -1.9
LINC00550-201ENST00000629293 IGHV3OR16-9A0A0B4J2B5 98 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms