RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TRIAP1O43715 76 aa4.4□□□□□ -1.7
CDKL5-205ENST00000623535 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.7
CDKL5-205ENST00000623535 ZNF80P51504 273 aaPredicted RBP4.4□□□□□ -1.7
CDKL5-205ENST00000623535 C10orf142B7Z368 130 aa4.4□□□□□ -1.7
CDKL5-205ENST00000623535 TM2D3Q9BRN9 247 aa4.4□□□□□ -1.7
CDKL5-205ENST00000623535 PSORS1C2Q9UIG4 136 aa4.4□□□□□ -1.7
CDKL5-205ENST00000623535 Q6ZS46 218 aa4.4□□□□□ -1.71
CDKL5-205ENST00000623535 AVPP01185 164 aa4.4□□□□□ -1.71
CDKL5-205ENST00000623535 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
CDKL5-205ENST00000623535 FAM19A4Q96LR4 140 aa4.4□□□□□ -1.71
CDKL5-205ENST00000623535 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
CDKL5-205ENST00000623535 PTPRBP23467 1997 aa4.39□□□□□ -1.71
CDKL5-205ENST00000623535 LOC101927531A0A1B0GV80 90 aa4.39□□□□□ -1.71
CDKL5-205ENST00000623535 CHTF8P0CG12 524 aa4.39□□□□□ -1.71
CDKL5-205ENST00000623535 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
CDKL5-205ENST00000623535 LINC00528Q8N1L1 170 aa4.39□□□□□ -1.71
CDKL5-205ENST00000623535 CAMK2N1Q7Z7J9 78 aa4.39□□□□□ -1.71
CDKL5-205ENST00000623535 BEAN1Q3B7T3 259 aa4.38□□□□□ -1.71
CDKL5-205ENST00000623535 MAST4O15021 2626 aa4.38□□□□□ -1.71
CDKL5-205ENST00000623535 TP73-AS1Q9UF72 201 aa4.38□□□□□ -1.71
CDKL5-205ENST00000623535 SEC61BP60468 96 aaKnown RBP4.37□□□□□ -1.71
CDKL5-205ENST00000623535 C2orf91Q6ZV80 131 aa4.37□□□□□ -1.71
CDKL5-205ENST00000623535 PHF5AQ7RTV0 110 aaKnown RBP4.37□□□□□ -1.71
CDKL5-205ENST00000623535 LINC01554Q52M75 96 aa4.37□□□□□ -1.71
CDKL5-205ENST00000623535 LINC00242Q5T6M2 205 aa4.37□□□□□ -1.71
CDKL5-205ENST00000623535 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
CDKL5-205ENST00000623535 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
CDKL5-205ENST00000623535 COA6Q5JTJ3 125 aaKnown RBP4.36□□□□□ -1.71
CDKL5-205ENST00000623535 YPEL4Q96NS1 127 aa4.36□□□□□ -1.71
CDKL5-205ENST00000623535 SMR3BP02814 79 aaPredicted RBP4.36□□□□□ -1.71
CDKL5-205ENST00000623535 LINC00588Q9Y4M8 146 aa4.36□□□□□ -1.71
CDKL5-205ENST00000623535 DNAH10OSP0CZ25 163 aa4.36□□□□□ -1.71
CDKL5-205ENST00000623535 IGLV1-50A0A075B6I6 118 aa4.35□□□□□ -1.71
CDKL5-205ENST00000623535 CSNK1G2-AS1Q8NCQ2 148 aa4.35□□□□□ -1.71
CDKL5-205ENST00000623535 MGAM2Q2M2H8 2515 aa4.35□□□□□ -1.71
CDKL5-205ENST00000623535 C9orf92A6NGG3 77 aa4.35□□□□□ -1.71
CDKL5-205ENST00000623535 COL4A3Q01955 1670 aa4.35□□□□□ -1.71
CDKL5-205ENST00000623535 SMIM1B2RUZ4 78 aa4.35□□□□□ -1.71
CDKL5-205ENST00000623535 POLR2KP53803 58 aaKnown RBP4.35□□□□□ -1.71
CDKL5-205ENST00000623535 WFDC2Q14508 124 aa4.34□□□□□ -1.71
CDKL5-205ENST00000623535 HECTD1Q9ULT8 2610 aa4.34□□□□□ -1.71
CDKL5-205ENST00000623535 IGLV7-46A0A075B6I9 117 aa4.34□□□□□ -1.71
CDKL5-205ENST00000623535 ST20-AS1Q8NBB2 130 aa4.34□□□□□ -1.71
CDKL5-205ENST00000623535 IGLV5-39A0A0G2JS06 123 aa4.34□□□□□ -1.72
CDKL5-205ENST00000623535 Q9UF83 564 aa4.34□□□□□ -1.72
CDKL5-205ENST00000623535 Q8N3U1 123 aa4.34□□□□□ -1.72
CDKL5-205ENST00000623535 ZNF861PO60384 105 aa4.33□□□□□ -1.72
CDKL5-205ENST00000623535 STAB1Q9NY15 2570 aa4.33□□□□□ -1.72
CDKL5-205ENST00000623535 GVQW2A0A096LPI5 108 aaPredicted RBP4.33□□□□□ -1.72
CDKL5-205ENST00000623535 Q6ZRX8 168 aa4.33□□□□□ -1.72
CDKL5-205ENST00000623535 DMBT1Q9UGM3 2413 aaPredicted RBP4.32□□□□□ -1.72
CDKL5-205ENST00000623535 A0A087WYN8 130 aa4.32□□□□□ -1.72
CDKL5-205ENST00000623535 SOSTDC1Q6X4U4 206 aa4.32□□□□□ -1.72
CDKL5-205ENST00000623535 COL27A1Q8IZC6 1860 aaPredicted RBP4.32□□□□□ -1.72
CDKL5-205ENST00000623535 COL4A1P02462 1669 aa4.32□□□□□ -1.72
CDKL5-205ENST00000623535 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
CDKL5-205ENST00000623535 OBSCN-AS1Q96MR7 158 aa4.32□□□□□ -1.72
CDKL5-205ENST00000623535 ATRQ13535 2644 aa4.32□□□□□ -1.72
CDKL5-205ENST00000623535 COX7CP15954 63 aa4.32□□□□□ -1.72
CDKL5-205ENST00000623535 C1orf195Q5TG92 126 aa4.32□□□□□ -1.72
CDKL5-205ENST00000623535 K7EIL1 84 aa4.31□□□□□ -1.72
CDKL5-205ENST00000623535 A0A087WTM6 91 aa4.31□□□□□ -1.72
CDKL5-205ENST00000623535 IGLV6-57P01721 117 aa4.31□□□□□ -1.72
CDKL5-205ENST00000623535 PRM2P04554 102 aa4.31□□□□□ -1.72
CDKL5-205ENST00000623535 TTTY13Q9BZ97 58 aa4.31□□□□□ -1.72
CDKL5-205ENST00000623535 VPREB1P12018 145 aa4.3□□□□□ -1.72
CDKL5-205ENST00000623535 C9orf129Q5T035 196 aaKnown RBP4.3□□□□□ -1.72
CDKL5-205ENST00000623535 OXTP01178 125 aa4.3□□□□□ -1.72
CDKL5-205ENST00000623535 LINC01600Q96MT4 127 aa4.3□□□□□ -1.72
CDKL5-205ENST00000623535 WDR87Q6ZQQ6 2873 aa4.29□□□□□ -1.72
CDKL5-205ENST00000623535 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
CDKL5-205ENST00000623535 IGLV8-61A0A075B6I0 122 aa4.29□□□□□ -1.72
CDKL5-205ENST00000623535 CDSNQ15517 529 aa4.29□□□□□ -1.72
CDKL5-205ENST00000623535 MUC22E2RYF6 1773 aaPredicted RBP4.29□□□□□ -1.72
CDKL5-205ENST00000623535 LINC00476Q8WZB0 136 aa4.29□□□□□ -1.72
CDKL5-205ENST00000623535 C11orf72Q8NBR9 251 aa4.29□□□□□ -1.72
CDKL5-205ENST00000623535 CNFNQ9BYD5 112 aa4.29□□□□□ -1.72
CDKL5-205ENST00000623535 WISP2O76076 250 aa4.29□□□□□ -1.72
CDKL5-205ENST00000623535 UQCR11O14957 56 aa4.28□□□□□ -1.72
CDKL5-205ENST00000623535 Q6ZQT0 140 aa4.28□□□□□ -1.72
CDKL5-205ENST00000623535 CEP295Q9C0D2 2601 aa4.28□□□□□ -1.72
CDKL5-205ENST00000623535 PRR9Q5T870 116 aa4.28□□□□□ -1.72
CDKL5-205ENST00000623535 A8MWP4 228 aa4.28□□□□□ -1.72
CDKL5-205ENST00000623535 PRR3P79522 188 aaKnown RBP4.28□□□□□ -1.72
CDKL5-205ENST00000623535 PSPHP1O15172 72 aa4.28□□□□□ -1.72
CDKL5-205ENST00000623535 LINC00694P0DN24 101 aa4.28□□□□□ -1.72
CDKL5-205ENST00000623535 CASC10Q5T4H9 136 aa4.27□□□□□ -1.73
CDKL5-205ENST00000623535 Q8NAQ8 132 aa4.27□□□□□ -1.73
CDKL5-205ENST00000623535 C8orf17Q9NRJ1 99 aa4.27□□□□□ -1.73
CDKL5-205ENST00000623535 CDC42SE1Q9NRR8 79 aa4.27□□□□□ -1.73
CDKL5-205ENST00000623535 MRPS12O15235 138 aaKnown RBP4.27□□□□□ -1.73
CDKL5-205ENST00000623535 IGLV7-43P04211 117 aa4.27□□□□□ -1.73
CDKL5-205ENST00000623535 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
CDKL5-205ENST00000623535 AMELXQ99217 191 aa4.26□□□□□ -1.73
CDKL5-205ENST00000623535 PLA2G2DQ9UNK4 145 aa4.26□□□□□ -1.73
CDKL5-205ENST00000623535 ELOF1P60002 83 aaKnown RBP4.26□□□□□ -1.73
CDKL5-205ENST00000623535 TRBV7-4A0A0J9YYF1 115 aa4.26□□□□□ -1.73
CDKL5-205ENST00000623535 CRIP1P50238 77 aa4.26□□□□□ -1.73
CDKL5-205ENST00000623535 Q5VSD8 79 aa4.26□□□□□ -1.73
CDKL5-205ENST00000623535 IGIPA6NJ69 53 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 315.8 ms