RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 A8MU10 97 aa8.61□□□□□ -1.03
LITAF-221ENST00000622633 CRPP02741 224 aa8.61□□□□□ -1.03
LITAF-221ENST00000622633 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
LITAF-221ENST00000622633 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
LITAF-221ENST00000622633 TOMM7Q9P0U1 55 aa8.6□□□□□ -1.03
LITAF-221ENST00000622633 ACANP16112 2415 aa8.6□□□□□ -1.03
LITAF-221ENST00000622633 TRBV6-4A0A1B0GX49 114 aa8.6□□□□□ -1.03
LITAF-221ENST00000622633 CMC4P56277 68 aaPredicted RBP8.6□□□□□ -1.03
LITAF-221ENST00000622633 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
LITAF-221ENST00000622633 IGLV4-60A0A075B6I1 120 aa8.59□□□□□ -1.03
LITAF-221ENST00000622633 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
LITAF-221ENST00000622633 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
LITAF-221ENST00000622633 JMJD7-PLA2G4BH0Y9G9 81 aa8.59□□□□□ -1.03
LITAF-221ENST00000622633 IGLV1-51P01701 117 aa8.59□□□□□ -1.03
LITAF-221ENST00000622633 COX7B2Q8TF08 81 aa8.59□□□□□ -1.03
LITAF-221ENST00000622633 MTORP42345 2549 aa8.58□□□□□ -1.04
LITAF-221ENST00000622633 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
LITAF-221ENST00000622633 M0R378 163 aa8.58□□□□□ -1.04
LITAF-221ENST00000622633 Q8N3U1 123 aa8.58□□□□□ -1.04
LITAF-221ENST00000622633 PSPHP1O15172 72 aa8.57□□□□□ -1.04
LITAF-221ENST00000622633 TRBV6-8A0A0A6YYG3 113 aa8.57□□□□□ -1.04
LITAF-221ENST00000622633 hDV103S1A0JD37 113 aa8.57□□□□□ -1.04
LITAF-221ENST00000622633 LRCOL1A6NCL2 159 aa8.57□□□□□ -1.04
LITAF-221ENST00000622633 KRTAP1-1Q07627 177 aa8.57□□□□□ -1.04
LITAF-221ENST00000622633 H3BS24 57 aa8.56□□□□□ -1.04
LITAF-221ENST00000622633 NREPQ16612 68 aa8.56□□□□□ -1.04
LITAF-221ENST00000622633 RNASE1P07998 156 aaKnown RBP8.56□□□□□ -1.04
LITAF-221ENST00000622633 TENM4Q6N022 2769 aa8.56□□□□□ -1.04
LITAF-221ENST00000622633 PRYO14603 147 aa8.55□□□□□ -1.04
LITAF-221ENST00000622633 ERC2-IT1O76042 136 aa8.55□□□□□ -1.04
LITAF-221ENST00000622633 DEFB130BP0DP73 79 aa8.55□□□□□ -1.04
LITAF-221ENST00000622633 DEFB130AP0DP74 79 aa8.55□□□□□ -1.04
LITAF-221ENST00000622633 LINC00158P58513 81 aa8.55□□□□□ -1.04
LITAF-221ENST00000622633 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
LITAF-221ENST00000622633 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
LITAF-221ENST00000622633 HAMPP81172 84 aa8.54□□□□□ -1.04
LITAF-221ENST00000622633 TRAV22A0A0B4J277 110 aa8.53□□□□□ -1.04
LITAF-221ENST00000622633 ANK3Q12955 4377 aaKnown RBP8.53□□□□□ -1.04
LITAF-221ENST00000622633 FN1P02751 2386 aaKnown RBP8.53□□□□□ -1.04
LITAF-221ENST00000622633 LINC00167Q96N53 147 aa8.53□□□□□ -1.04
LITAF-221ENST00000622633 Q6ZVQ6 151 aa8.52□□□□□ -1.05
LITAF-221ENST00000622633 M0R2N4 97 aa8.52□□□□□ -1.05
LITAF-221ENST00000622633 CCL18P55774 89 aa8.52□□□□□ -1.05
LITAF-221ENST00000622633 SYCNQ0VAF6 134 aa8.52□□□□□ -1.05
LITAF-221ENST00000622633 C8orf87E5RJ46 101 aa8.51□□□□□ -1.05
LITAF-221ENST00000622633 LINC00959A0A1B0GUT2 108 aa8.51□□□□□ -1.05
LITAF-221ENST00000622633 PDZD2O15018 2839 aa8.5□□□□□ -1.05
LITAF-221ENST00000622633 GYPEP15421 78 aa8.5□□□□□ -1.05
LITAF-221ENST00000622633 CXCL6P80162 114 aa8.5□□□□□ -1.05
LITAF-221ENST00000622633 Q6ZQT0 140 aa8.49□□□□□ -1.05
LITAF-221ENST00000622633 A0A096LPF7 62 aa8.48□□□□□ -1.05
LITAF-221ENST00000622633 TMEM256-PLSCR3K7ERE1 68 aa8.48□□□□□ -1.05
LITAF-221ENST00000622633 CLPSL2Q6UWE3 100 aa8.48□□□□□ -1.05
LITAF-221ENST00000622633 NBEAL2Q6ZNJ1 2754 aa8.48□□□□□ -1.05
LITAF-221ENST00000622633 KRTAP10-3P60369 221 aa8.48□□□□□ -1.05
LITAF-221ENST00000622633 UBE2BP63146 152 aa8.48□□□□□ -1.05
LITAF-221ENST00000622633 BPY2O14599 106 aa8.47□□□□□ -1.05
LITAF-221ENST00000622633 C1orf64Q8NEQ6 169 aa8.47□□□□□ -1.05
LITAF-221ENST00000622633 ITPR2Q14571 2701 aa8.47□□□□□ -1.05
LITAF-221ENST00000622633 A8MUN3 132 aa8.46□□□□□ -1.05
LITAF-221ENST00000622633 ZNF73O43830 326 aaPredicted RBP8.46□□□□□ -1.05
LITAF-221ENST00000622633 NDUFS5O43920 106 aa8.45□□□□□ -1.06
LITAF-221ENST00000622633 LINC00612Q8N6U2 182 aa8.45□□□□□ -1.06
LITAF-221ENST00000622633 SMR3AQ99954 134 aa8.45□□□□□ -1.06
LITAF-221ENST00000622633 HIGD2AQ9BW72 106 aa8.45□□□□□ -1.06
LITAF-221ENST00000622633 GCN1Q92616 2671 aaKnown RBP8.45□□□□□ -1.06
LITAF-221ENST00000622633 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
LITAF-221ENST00000622633 Q8N814 137 aa8.45□□□□□ -1.06
LITAF-221ENST00000622633 X6R8D5 127 aa8.45□□□□□ -1.06
LITAF-221ENST00000622633 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
LITAF-221ENST00000622633 OCR1Q9BZK8 76 aa8.44□□□□□ -1.06
LITAF-221ENST00000622633 LYRM9A8MSI8 78 aa8.44□□□□□ -1.06
LITAF-221ENST00000622633 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
LITAF-221ENST00000622633 DEFB4AO15263 64 aa8.43□□□□□ -1.06
LITAF-221ENST00000622633 PRO0255Q9UI72 69 aa8.43□□□□□ -1.06
LITAF-221ENST00000622633 LOC110117498A0A087WWA1 95 aa8.43□□□□□ -1.06
LITAF-221ENST00000622633 A0A1B0GUV1 79 aa8.43□□□□□ -1.06
LITAF-221ENST00000622633 Q5VV11 94 aa8.43□□□□□ -1.06
LITAF-221ENST00000622633 SPATA3Q8NHX4 192 aa8.43□□□□□ -1.06
LITAF-221ENST00000622633 CD164L2Q6UWJ8 174 aa8.42□□□□□ -1.06
LITAF-221ENST00000622633 LINC00269Q8N2A0 174 aa8.42□□□□□ -1.06
LITAF-221ENST00000622633 HELZ2Q9BYK8 2649 aaKnown RBP8.42□□□□□ -1.06
LITAF-221ENST00000622633 LY6G6DO95868 133 aa8.42□□□□□ -1.06
LITAF-221ENST00000622633 PRR3P79522 188 aaKnown RBP8.42□□□□□ -1.06
LITAF-221ENST00000622633 A6NN06 94 aa8.41□□□□□ -1.06
LITAF-221ENST00000622633 HIVEP2P31629 2446 aa8.41□□□□□ -1.06
LITAF-221ENST00000622633 Q8IZM0 81 aa8.41□□□□□ -1.06
LITAF-221ENST00000622633 IGLV10-54A0A075B6I4 117 aa8.4□□□□□ -1.07
LITAF-221ENST00000622633 VWFP04275 2813 aa8.39□□□□□ -1.07
LITAF-221ENST00000622633 PSCAO43653 123 aa8.39□□□□□ -1.07
LITAF-221ENST00000622633 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
LITAF-221ENST00000622633 DEFB135Q30KP9 77 aa8.38□□□□□ -1.07
LITAF-221ENST00000622633 KIAA0087Q14695 138 aa8.38□□□□□ -1.07
LITAF-221ENST00000622633 C9orf116Q5BN46 136 aaPredicted RBP8.37□□□□□ -1.07
LITAF-221ENST00000622633 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
LITAF-221ENST00000622633 UNC79Q9P2D8 2635 aa8.37□□□□□ -1.07
LITAF-221ENST00000622633 ANGP03950 147 aaKnown RBP8.37□□□□□ -1.07
LITAF-221ENST00000622633 ATP11AUNQ6ZP68 121 aa8.37□□□□□ -1.07
LITAF-221ENST00000622633 FASNP49327 2511 aaKnown RBP8.36□□□□□ -1.07
LITAF-221ENST00000622633 UBE2AP49459 152 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 347.2 ms