RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SND1-IT1Q9HBX3 110 aa11.6□□□□□ -0.55
CIRBP-245ENST00000621399 M0QXV9 152 aa11.59□□□□□ -0.55
CIRBP-245ENST00000621399 KRTAP10-4P60372 401 aaPredicted RBP11.58□□□□□ -0.56
CIRBP-245ENST00000621399 INAFM2P0DMQ5 153 aa11.57□□□□□ -0.56
CIRBP-245ENST00000621399 PLA2G2DQ9UNK4 145 aa11.57□□□□□ -0.56
CIRBP-245ENST00000621399 C22orf24Q9Y442 160 aa11.57□□□□□ -0.56
CIRBP-245ENST00000621399 IGKV2D-26A0A0A0MRZ7 120 aa11.55□□□□□ -0.56
CIRBP-245ENST00000621399 MIR7-3HGQ8N6C7 128 aa11.55□□□□□ -0.56
CIRBP-245ENST00000621399 UBE2BP63146 152 aa11.54□□□□□ -0.56
CIRBP-245ENST00000621399 PRR3P79522 188 aaKnown RBP11.54□□□□□ -0.56
CIRBP-245ENST00000621399 LBHQ53QV2 105 aaPredicted RBP11.54□□□□□ -0.56
CIRBP-245ENST00000621399 TMA7Q9Y2S6 64 aaKnown RBP11.54□□□□□ -0.56
CIRBP-245ENST00000621399 SCGB1D1O95968 90 aa11.53□□□□□ -0.56
CIRBP-245ENST00000621399 ANKRD39Q53RE8 183 aa11.53□□□□□ -0.56
CIRBP-245ENST00000621399 NKAPP1Q8N9T2 125 aa11.53□□□□□ -0.56
CIRBP-245ENST00000621399 A0A0J9YXY3 114 aa11.52□□□□□ -0.57
CIRBP-245ENST00000621399 RPL24P83731 157 aaKnown RBP11.52□□□□□ -0.57
CIRBP-245ENST00000621399 MRPL55Q7Z7F7 128 aaKnown RBP11.52□□□□□ -0.57
CIRBP-245ENST00000621399 TP73-AS1Q9UF72 201 aa11.52□□□□□ -0.57
CIRBP-245ENST00000621399 IGLV5-37A0A075B6J1 123 aa11.51□□□□□ -0.57
CIRBP-245ENST00000621399 ZNF815PA8K554 130 aa11.51□□□□□ -0.57
CIRBP-245ENST00000621399 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
CIRBP-245ENST00000621399 PSORS1C2Q9UIG4 136 aa11.51□□□□□ -0.57
CIRBP-245ENST00000621399 KRTAP11-1Q8IUC1 163 aa11.5□□□□□ -0.57
CIRBP-245ENST00000621399 DAND5Q8N907 189 aa11.5□□□□□ -0.57
CIRBP-245ENST00000621399 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
CIRBP-245ENST00000621399 HSBP1L1C9JCN9 74 aa11.49□□□□□ -0.57
CIRBP-245ENST00000621399 VPREB1P12018 145 aa11.49□□□□□ -0.57
CIRBP-245ENST00000621399 C1orf137Q5JT78 98 aa11.48□□□□□ -0.57
CIRBP-245ENST00000621399 BOD1L2Q8IYS8 172 aa11.48□□□□□ -0.57
CIRBP-245ENST00000621399 LINC00167Q96N53 147 aa11.48□□□□□ -0.57
CIRBP-245ENST00000621399 HNRNPA3P51991 378 aaKnown RBP11.47□□□□□ -0.57
CIRBP-245ENST00000621399 Q8NDZ9 215 aa11.47□□□□□ -0.57
CIRBP-245ENST00000621399 RPL37AP8A6NKH3 93 aa11.46□□□□□ -0.57
CIRBP-245ENST00000621399 ADAMTSL4-AS1Q5T5F5 129 aa11.46□□□□□ -0.57
CIRBP-245ENST00000621399 HERC1Q15751 4861 aa11.45□□□□□ -0.58
CIRBP-245ENST00000621399 PCP2Q8IVA1 136 aa11.45□□□□□ -0.58
CIRBP-245ENST00000621399 MIEN1Q9BRT3 115 aa11.45□□□□□ -0.58
CIRBP-245ENST00000621399 TIMM17BO60830 172 aa11.44□□□□□ -0.58
CIRBP-245ENST00000621399 SCGB1D4Q6XE38 83 aa11.44□□□□□ -0.58
CIRBP-245ENST00000621399 LOC107984156A0A0G2JMH3 177 aa11.43□□□□□ -0.58
CIRBP-245ENST00000621399 ARL17AQ8IVW1 177 aa11.43□□□□□ -0.58
CIRBP-245ENST00000621399 LITAFQ99732 161 aa11.43□□□□□ -0.58
CIRBP-245ENST00000621399 NPC2P61916 151 aa11.42□□□□□ -0.58
CIRBP-245ENST00000621399 PKHD1L1Q86WI1 4243 aa11.41□□□□□ -0.58
CIRBP-245ENST00000621399 IGKV2-28A0A075B6P5 120 aa11.41□□□□□ -0.58
CIRBP-245ENST00000621399 M0R378 163 aa11.41□□□□□ -0.58
CIRBP-245ENST00000621399 IGKV2D-28P01615 120 aa11.41□□□□□ -0.58
CIRBP-245ENST00000621399 IGLV7-43P04211 117 aa11.41□□□□□ -0.58
CIRBP-245ENST00000621399 NCR3O14931 201 aa11.4□□□□□ -0.58
CIRBP-245ENST00000621399 JOSD1Q15040 202 aaPredicted RBP11.4□□□□□ -0.58
CIRBP-245ENST00000621399 SPINK6Q6UWN8 80 aa11.4□□□□□ -0.58
CIRBP-245ENST00000621399 MYCBP2O75592 4640 aa11.39□□□□□ -0.59
CIRBP-245ENST00000621399 FLG2Q5D862 2391 aaPredicted RBP11.39□□□□□ -0.59
CIRBP-245ENST00000621399 IGLV1-50A0A075B6I6 118 aa11.39□□□□□ -0.59
CIRBP-245ENST00000621399 SRSF9Q13242 221 aaKnown RBP eCLIP11.39□□□□□ -0.593e-7■■□□□ 13.7
CIRBP-245ENST00000621399 SOSTDC1Q6X4U4 206 aa11.39□□□□□ -0.59
CIRBP-245ENST00000621399 TMEM238C9JI98 176 aa11.38□□□□□ -0.59
CIRBP-245ENST00000621399 LINC00308Q8TCZ7 52 aa11.38□□□□□ -0.59
CIRBP-245ENST00000621399 EIF4EBP3O60516 100 aaPredicted RBP11.37□□□□□ -0.59
CIRBP-245ENST00000621399 DMBT1Q9UGM3 2413 aaPredicted RBP11.37□□□□□ -0.59
CIRBP-245ENST00000621399 BCE1O60756 84 aa11.36□□□□□ -0.59
CIRBP-245ENST00000621399 NDUFC2O95298 119 aa11.36□□□□□ -0.59
CIRBP-245ENST00000621399 SPANXDQ9BXN6 97 aa11.35□□□□□ -0.59
CIRBP-245ENST00000621399 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
CIRBP-245ENST00000621399 SPANXCQ9NY87 97 aa11.35□□□□□ -0.59
CIRBP-245ENST00000621399 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
CIRBP-245ENST00000621399 REG3GQ6UW15 175 aa11.33□□□□□ -0.6
CIRBP-245ENST00000621399 VAMP8Q9BV40 100 aa11.33□□□□□ -0.6
CIRBP-245ENST00000621399 TMEM126AQ9H061 195 aa11.33□□□□□ -0.6
CIRBP-245ENST00000621399 PAM16Q9Y3D7 125 aa11.33□□□□□ -0.6
CIRBP-245ENST00000621399 SPATA45Q537H7 98 aa11.32□□□□□ -0.6
CIRBP-245ENST00000621399 Q6ZVH6 145 aa11.32□□□□□ -0.6
CIRBP-245ENST00000621399 COPS9Q8WXC6 57 aa11.32□□□□□ -0.6
CIRBP-245ENST00000621399 DIRC1Q969H9 104 aa11.32□□□□□ -0.6
CIRBP-245ENST00000621399 TRBV10-3A0A0K0K1G6 114 aa11.31□□□□□ -0.6
CIRBP-245ENST00000621399 ZNF861PO60384 105 aa11.31□□□□□ -0.6
CIRBP-245ENST00000621399 COX8AP10176 69 aa11.31□□□□□ -0.6
CIRBP-245ENST00000621399 IFITM1P13164 125 aa11.3□□□□□ -0.6
CIRBP-245ENST00000621399 DDTP30046 118 aa11.3□□□□□ -0.6
CIRBP-245ENST00000621399 RPL28P46779 137 aaKnown RBP11.3□□□□□ -0.6
CIRBP-245ENST00000621399 UBE2AP49459 152 aa11.3□□□□□ -0.6
CIRBP-245ENST00000621399 S100A12P80511 92 aa11.3□□□□□ -0.6
CIRBP-245ENST00000621399 PYY3Q5JQD4 70 aa11.3□□□□□ -0.6
CIRBP-245ENST00000621399 S100A7L2Q5SY68 101 aa11.3□□□□□ -0.6
CIRBP-245ENST00000621399 LRP1Q07954 4544 aaKnown RBP11.3□□□□□ -0.6
CIRBP-245ENST00000621399 FAT3Q8TDW7 4589 aa11.3□□□□□ -0.6
CIRBP-245ENST00000621399 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
CIRBP-245ENST00000621399 OXTP01178 125 aa11.29□□□□□ -0.6
CIRBP-245ENST00000621399 H0Y9J4 135 aa11.28□□□□□ -0.6
CIRBP-245ENST00000621399 PRYO14603 147 aa11.28□□□□□ -0.6
CIRBP-245ENST00000621399 FAM19A1Q7Z5A9 133 aa11.28□□□□□ -0.6
CIRBP-245ENST00000621399 MUSTN1Q8IVN3 82 aa11.28□□□□□ -0.6
CIRBP-245ENST00000621399 C14orf144Q96I85 54 aa11.28□□□□□ -0.6
CIRBP-245ENST00000621399 KCNQ1DNQ9H478 68 aa11.28□□□□□ -0.6
CIRBP-245ENST00000621399 DLEU1O43261 78 aa11.27□□□□□ -0.61
CIRBP-245ENST00000621399 J3QL48 77 aa11.26□□□□□ -0.61
CIRBP-245ENST00000621399 IGLV6-57P01721 117 aa11.26□□□□□ -0.61
CIRBP-245ENST00000621399 LINC00518Q8N0U6 118 aa11.26□□□□□ -0.61
CIRBP-245ENST00000621399 PPDPFQ9H3Y8 114 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms