RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PSMB2P49721 201 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 SIGMAR1Q99720 223 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 TIMM21Q9BVV7 248 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 CDIP1Q9H305 208 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 LOC107984156A0A0G2JMH3 177 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 USP17L23D6RBM5 183 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 ANGP03950 147 aaKnown RBP5.04□□□□□ -1.6
CLK1-215ENST00000621181 MT1HL1P0DM35 61 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 RPL36AP83881 106 aaKnown RBP5.04□□□□□ -1.6
CLK1-215ENST00000621181 ADAMTSL4-AS1Q5T5F5 129 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 LYRM7Q5U5X0 104 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 SFTA2Q6UW10 78 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 Q6ZRU5 148 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 Q6ZUT4 128 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 FAM19A3Q7Z5A8 133 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 ARL17AQ8IVW1 177 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
CLK1-215ENST00000621181 SPANXDQ9BXN6 97 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 SPANXCQ9NY87 97 aa5.04□□□□□ -1.6
CLK1-215ENST00000621181 IGHV3-64A0A075B6Q5 118 aa5.03□□□□□ -1.6
CLK1-215ENST00000621181 DGAT2L7PQ6IED9 249 aa5.03□□□□□ -1.6
CLK1-215ENST00000621181 ENHOQ6UWT2 76 aa5.03□□□□□ -1.6
CLK1-215ENST00000621181 TEN1Q86WV5 123 aa5.03□□□□□ -1.6
CLK1-215ENST00000621181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.02□□□□□ -1.61
CLK1-215ENST00000621181 IGLV5-39A0A0G2JS06 123 aa5.02□□□□□ -1.61
CLK1-215ENST00000621181 TRBV10-1A0A0K0K1A3 114 aa5.02□□□□□ -1.61
CLK1-215ENST00000621181 IGKV2-29A2NJV5 120 aaPredicted RBP5.02□□□□□ -1.61
CLK1-215ENST00000621181 TIMM17BO60830 172 aa5.02□□□□□ -1.61
CLK1-215ENST00000621181 RNASE13Q5GAN3 156 aaKnown RBP5.02□□□□□ -1.61
CLK1-215ENST00000621181 TRBV6-8A0A0A6YYG3 113 aa5.02□□□□□ -1.61
CLK1-215ENST00000621181 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.02□□□□□ -1.61
CLK1-215ENST00000621181 C9orf163Q8N9P6 203 aa5.02□□□□□ -1.61
CLK1-215ENST00000621181 PPDPFLQ8WWR9 84 aa5.02□□□□□ -1.61
CLK1-215ENST00000621181 NDUFA12Q9UI09 145 aa5.02□□□□□ -1.61
CLK1-215ENST00000621181 ERG28Q9UKR5 140 aa5.02□□□□□ -1.61
CLK1-215ENST00000621181 TRBV30A0A0K0K1B3 111 aa5.01□□□□□ -1.61
CLK1-215ENST00000621181 SPINK8P0C7L1 97 aa5.01□□□□□ -1.61
CLK1-215ENST00000621181 MIAQ16674 131 aa5.01□□□□□ -1.61
CLK1-215ENST00000621181 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
CLK1-215ENST00000621181 DPH3Q96FX2 82 aa5.01□□□□□ -1.61
CLK1-215ENST00000621181 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
CLK1-215ENST00000621181 CHCHD5Q9BSY4 110 aa5.01□□□□□ -1.61
CLK1-215ENST00000621181 PANO1I0J062 215 aa5□□□□□ -1.61
CLK1-215ENST00000621181 COX6A2Q02221 97 aa5□□□□□ -1.61
CLK1-215ENST00000621181 CLPSL2Q6UWE3 100 aa5□□□□□ -1.61
CLK1-215ENST00000621181 SDIM1Q6ZPB5 146 aa5□□□□□ -1.61
CLK1-215ENST00000621181 NTM-AS1Q6ZSK4 140 aa5□□□□□ -1.61
CLK1-215ENST00000621181 TMEM101Q96IK0 257 aa5□□□□□ -1.61
CLK1-215ENST00000621181 CDKN2A-AS1Q9UH64 79 aa5□□□□□ -1.61
CLK1-215ENST00000621181 CSDC2Q9Y534 153 aaKnown RBP5□□□□□ -1.61
CLK1-215ENST00000621181 NDUFA1O15239 70 aa5□□□□□ -1.61
CLK1-215ENST00000621181 SMAGPQ0VAQ4 97 aa5□□□□□ -1.61
CLK1-215ENST00000621181 LINC00242Q5T6M2 205 aa5□□□□□ -1.61
CLK1-215ENST00000621181 ANKRD29Q8N6D5 301 aa5□□□□□ -1.61
CLK1-215ENST00000621181 RNF213Q63HN8 5207 aa4.99□□□□□ -1.61
CLK1-215ENST00000621181 TRIAP1O43715 76 aa4.99□□□□□ -1.61
CLK1-215ENST00000621181 SLC25A20O43772 301 aa4.99□□□□□ -1.61
CLK1-215ENST00000621181 SCGB1C2P0DMR2 95 aa4.99□□□□□ -1.61
CLK1-215ENST00000621181 IFITM1P13164 125 aa4.99□□□□□ -1.61
CLK1-215ENST00000621181 DNAH8Q96JB1 4490 aa4.99□□□□□ -1.61
CLK1-215ENST00000621181 FAT3Q8TDW7 4589 aa4.99□□□□□ -1.61
CLK1-215ENST00000621181 LINC00269Q8N2A0 174 aa4.98□□□□□ -1.61
CLK1-215ENST00000621181 C9JAW5 83 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 CIRBPQ14011 172 aaKnown RBP4.97□□□□□ -1.61
CLK1-215ENST00000621181 PPDPFQ9H3Y8 114 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 GEMIN7Q9H840 131 aaKnown RBP4.97□□□□□ -1.61
CLK1-215ENST00000621181 CDC42SE2Q9NRR3 84 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 PRR34Q9NV39 138 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 IGLV10-54A0A075B6I4 117 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 A0A087WYN8 130 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 TRBV10-2A0A0K0K1G8 114 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 SMIM1B2RUZ4 78 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 H7C2G1 150 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 MT-ATP8P03928 68 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 RPL13AP40429 203 aaKnown RBP4.97□□□□□ -1.61
CLK1-215ENST00000621181 CNBPP62633 177 aaKnown RBP4.97□□□□□ -1.61
CLK1-215ENST00000621181 HERVK_113P63121 156 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 ATXN8Q156A1 80 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 C7orf33Q8WU49 177 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 ZNF625Q96I27 306 aaPredicted RBP4.97□□□□□ -1.61
CLK1-215ENST00000621181 LRP2P98164 4655 aa4.97□□□□□ -1.61
CLK1-215ENST00000621181 PRSS2P07478 247 aa4.96□□□□□ -1.62
CLK1-215ENST00000621181 CHTF8P0CG12 524 aa4.96□□□□□ -1.62
CLK1-215ENST00000621181 SOSTDC1Q6X4U4 206 aa4.96□□□□□ -1.62
CLK1-215ENST00000621181 H7C423 109 aa4.95□□□□□ -1.62
CLK1-215ENST00000621181 LST1O00453 97 aa4.95□□□□□ -1.62
CLK1-215ENST00000621181 REG3AQ06141 175 aa4.95□□□□□ -1.62
CLK1-215ENST00000621181 GAGE6Q13070 117 aa4.95□□□□□ -1.62
CLK1-215ENST00000621181 KRTAP26-1Q6PEX3 210 aa4.95□□□□□ -1.62
CLK1-215ENST00000621181 LINC00308Q8TCZ7 52 aa4.95□□□□□ -1.62
CLK1-215ENST00000621181 SPACA4Q8TDM5 124 aa4.95□□□□□ -1.62
CLK1-215ENST00000621181 Q1RN00 199 aa4.94□□□□□ -1.62
CLK1-215ENST00000621181 DAND5Q8N907 189 aa4.94□□□□□ -1.62
CLK1-215ENST00000621181 TRAV8-4A0A0B4J246 113 aa4.93□□□□□ -1.62
CLK1-215ENST00000621181 H3BT86 120 aa4.93□□□□□ -1.62
CLK1-215ENST00000621181 NPC2P61916 151 aa4.93□□□□□ -1.62
CLK1-215ENST00000621181 TRAV13-1A0A0B4J241 112 aa4.93□□□□□ -1.62
CLK1-215ENST00000621181 SLPIP03973 132 aa4.93□□□□□ -1.62
CLK1-215ENST00000621181 CLEC2BQ92478 149 aa4.93□□□□□ -1.62
CLK1-215ENST00000621181 TMEM243Q9BU79 118 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 228.4 ms