RNA–Protein interactions for RNA: ENST00000621161.4

RAB11FIP4-211, Transcript of RAB11 family interacting protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP4, Length 8,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-211ENST00000621161 LINC01006Q8NI28 216 aa14.1□□□□□ -0.15
RAB11FIP4-211ENST00000621161 SMCR5Q8TEV8 140 aa14.1□□□□□ -0.15
RAB11FIP4-211ENST00000621161 IGLV4-60A0A075B6I1 120 aa14.09□□□□□ -0.15
RAB11FIP4-211ENST00000621161 NHLRC4P0CG21 123 aaPredicted RBP14.09□□□□□ -0.15
RAB11FIP4-211ENST00000621161 JMJD1CQ15652 2540 aa14.09□□□□□ -0.15
RAB11FIP4-211ENST00000621161 GAS8-AS1O95177 125 aa14.09□□□□□ -0.15
RAB11FIP4-211ENST00000621161 C11orf21Q9P2W6 132 aa14.08□□□□□ -0.15
RAB11FIP4-211ENST00000621161 USP9XQ93008 2570 aaPredicted RBP14.08□□□□□ -0.16
RAB11FIP4-211ENST00000621161 KIAA0087Q14695 138 aa14.08□□□□□ -0.16
RAB11FIP4-211ENST00000621161 AMELXQ99217 191 aa14.07□□□□□ -0.16
RAB11FIP4-211ENST00000621161 COA5Q86WW8 74 aa14.07□□□□□ -0.16
RAB11FIP4-211ENST00000621161 TSPEAR-AS2P59090 65 aa14.06□□□□□ -0.16
RAB11FIP4-211ENST00000621161 A8MUN3 132 aa14.06□□□□□ -0.16
RAB11FIP4-211ENST00000621161 BRWD1-AS2P59051 145 aa14.06□□□□□ -0.16
RAB11FIP4-211ENST00000621161 ZNF295-AS1Q8N0V1 137 aa14.05□□□□□ -0.16
RAB11FIP4-211ENST00000621161 C18orf65Q6ZTR6 163 aa14.05□□□□□ -0.16
RAB11FIP4-211ENST00000621161 SPATA3Q8NHX4 192 aa14.04□□□□□ -0.16
RAB11FIP4-211ENST00000621161 EP400Q96L91 3159 aa14.04□□□□□ -0.16
RAB11FIP4-211ENST00000621161 LINC00483Q53H64 154 aa14.03□□□□□ -0.16
RAB11FIP4-211ENST00000621161 PLA2G5P39877 138 aa14.02□□□□□ -0.16
RAB11FIP4-211ENST00000621161 C22orf24Q9Y442 160 aa14.02□□□□□ -0.16
RAB11FIP4-211ENST00000621161 IGLV1-40P01703 118 aa14.01□□□□□ -0.17
RAB11FIP4-211ENST00000621161 TM2D3Q9BRN9 247 aa14.01□□□□□ -0.17
RAB11FIP4-211ENST00000621161 FAM19A4Q96LR4 140 aa14□□□□□ -0.17
RAB11FIP4-211ENST00000621161 USP9YO00507 2555 aaPredicted RBP13.99□□□□□ -0.17
RAB11FIP4-211ENST00000621161 AVPP01185 164 aa13.99□□□□□ -0.17
RAB11FIP4-211ENST00000621161 C11orf72Q8NBR9 251 aa13.98□□□□□ -0.17
RAB11FIP4-211ENST00000621161 C1orf229Q6ZS94 237 aaPredicted RBP13.98□□□□□ -0.17
RAB11FIP4-211ENST00000621161 LYPD5Q6UWN5 251 aa13.98□□□□□ -0.17
RAB11FIP4-211ENST00000621161 Q8NA96 180 aa13.97□□□□□ -0.17
RAB11FIP4-211ENST00000621161 CRIP3Q6Q6R5 217 aa13.97□□□□□ -0.17
RAB11FIP4-211ENST00000621161 Q6ZRU5 148 aa13.97□□□□□ -0.17
RAB11FIP4-211ENST00000621161 CAMK2N1Q7Z7J9 78 aa13.95□□□□□ -0.18
RAB11FIP4-211ENST00000621161 BRI3O95415 125 aa13.95□□□□□ -0.18
RAB11FIP4-211ENST00000621161 SPTBN4Q9H254 2564 aa13.94□□□□□ -0.18
RAB11FIP4-211ENST00000621161 Q6ZPA2 131 aa13.93□□□□□ -0.18
RAB11FIP4-211ENST00000621161 ANKRD17O75179 2603 aaKnown RBP13.93□□□□□ -0.18
RAB11FIP4-211ENST00000621161 LINC00336Q6ZUF6 198 aa13.93□□□□□ -0.18
RAB11FIP4-211ENST00000621161 Q6ZQT0 140 aa13.93□□□□□ -0.18
RAB11FIP4-211ENST00000621161 COL27A1Q8IZC6 1860 aaPredicted RBP13.93□□□□□ -0.18
RAB11FIP4-211ENST00000621161 TYMSOSQ8TAI1 123 aa13.92□□□□□ -0.18
RAB11FIP4-211ENST00000621161 POLQO75417 2590 aa13.92□□□□□ -0.18
RAB11FIP4-211ENST00000621161 Q96NJ1 140 aa13.92□□□□□ -0.18
RAB11FIP4-211ENST00000621161 C11orf71Q6IPW1 123 aa13.92□□□□□ -0.18
RAB11FIP4-211ENST00000621161 CEP295Q9C0D2 2601 aa13.92□□□□□ -0.18
RAB11FIP4-211ENST00000621161 PLA2G2DQ9UNK4 145 aa13.91□□□□□ -0.18
RAB11FIP4-211ENST00000621161 FAM229AH3BQW9 127 aa13.91□□□□□ -0.18
RAB11FIP4-211ENST00000621161 ZNF580Q9UK33 172 aa13.91□□□□□ -0.18
RAB11FIP4-211ENST00000621161 PRO3102Q9H379 93 aa13.9□□□□□ -0.18
RAB11FIP4-211ENST00000621161 Q8NBF4 154 aa13.89□□□□□ -0.19
RAB11FIP4-211ENST00000621161 MTORP42345 2549 aa13.89□□□□□ -0.19
RAB11FIP4-211ENST00000621161 ODF3L2Q3SX64 289 aa13.89□□□□□ -0.19
RAB11FIP4-211ENST00000621161 IGLV1-51P01701 117 aa13.87□□□□□ -0.19
RAB11FIP4-211ENST00000621161 COX6B2Q6YFQ2 88 aa13.87□□□□□ -0.19
RAB11FIP4-211ENST00000621161 LOC110117498A0A087WWA1 95 aa13.87□□□□□ -0.19
RAB11FIP4-211ENST00000621161 Q1T7F1 81 aa13.86□□□□□ -0.19
RAB11FIP4-211ENST00000621161 LINC00476Q8WZB0 136 aa13.85□□□□□ -0.19
RAB11FIP4-211ENST00000621161 PRRC2CQ9Y520 2896 aaKnown RBP13.85□□□□□ -0.19
RAB11FIP4-211ENST00000621161 A0A1W2PNU3 283 aaPredicted RBP13.82□□□□□ -0.2
RAB11FIP4-211ENST00000621161 LINC00167Q96N53 147 aa13.82□□□□□ -0.2
RAB11FIP4-211ENST00000621161 KIF25-AS1Q9Y6Z4 181 aa13.82□□□□□ -0.2
RAB11FIP4-211ENST00000621161 CR1P17927 2039 aa13.8□□□□□ -0.2
RAB11FIP4-211ENST00000621161 URB1-AS1Q96HZ7 61 aa13.78□□□□□ -0.2
RAB11FIP4-211ENST00000621161 PCSK5Q92824 1860 aa13.78□□□□□ -0.2
RAB11FIP4-211ENST00000621161 CENPFP49454 3210 aa13.77□□□□□ -0.2
RAB11FIP4-211ENST00000621161 A8MWP4 228 aa13.77□□□□□ -0.21
RAB11FIP4-211ENST00000621161 LINC00310P59036 64 aa13.76□□□□□ -0.21
RAB11FIP4-211ENST00000621161 Q6ZRP5 223 aa13.76□□□□□ -0.21
RAB11FIP4-211ENST00000621161 Q6ZRX8 168 aa13.76□□□□□ -0.21
RAB11FIP4-211ENST00000621161 WIPF1O43516 503 aa13.76□□□□□ -0.21
RAB11FIP4-211ENST00000621161 Q6ZSN1 163 aa13.74□□□□□ -0.21
RAB11FIP4-211ENST00000621161 RPL37AP61513 92 aaKnown RBP13.74□□□□□ -0.21
RAB11FIP4-211ENST00000621161 C10orf142B7Z368 130 aa13.73□□□□□ -0.21
RAB11FIP4-211ENST00000621161 RBM12B-AS1Q9P1G2 102 aa13.73□□□□□ -0.21
RAB11FIP4-211ENST00000621161 TRBV7-4A0A0J9YYF1 115 aa13.73□□□□□ -0.21
RAB11FIP4-211ENST00000621161 DMAC1Q96GE9 116 aa13.71□□□□□ -0.21
RAB11FIP4-211ENST00000621161 IGLV5-39A0A0G2JS06 123 aa13.71□□□□□ -0.21
RAB11FIP4-211ENST00000621161 MRPL34Q9BQ48 92 aaKnown RBP13.71□□□□□ -0.21
RAB11FIP4-211ENST00000621161 KLKP1Q107X0 134 aa13.71□□□□□ -0.22
RAB11FIP4-211ENST00000621161 COX8CQ7Z4L0 72 aa13.7□□□□□ -0.22
RAB11FIP4-211ENST00000621161 CHTF8P0CG12 524 aa13.69□□□□□ -0.22
RAB11FIP4-211ENST00000621161 IGLV6-57P01721 117 aa13.68□□□□□ -0.22
RAB11FIP4-211ENST00000621161 WISP2O76076 250 aa13.68□□□□□ -0.22
RAB11FIP4-211ENST00000621161 FHL3Q13643 280 aa13.67□□□□□ -0.22
RAB11FIP4-211ENST00000621161 CHD8Q9HCK8 2581 aa13.65□□□□□ -0.22
RAB11FIP4-211ENST00000621161 J3QL48 77 aa13.65□□□□□ -0.22
RAB11FIP4-211ENST00000621161 IGHV3OR16-9A0A0B4J2B5 98 aa13.64□□□□□ -0.23
RAB11FIP4-211ENST00000621161 ST20-AS1Q8NBB2 130 aa13.64□□□□□ -0.23
RAB11FIP4-211ENST00000621161 C16orf90A8MZG2 172 aa13.64□□□□□ -0.23
RAB11FIP4-211ENST00000621161 PHF5AQ7RTV0 110 aaKnown RBP13.64□□□□□ -0.23
RAB11FIP4-211ENST00000621161 A0A096LNJ9 63 aa13.63□□□□□ -0.23
RAB11FIP4-211ENST00000621161 C16orf95Q9H693 158 aa13.62□□□□□ -0.23
RAB11FIP4-211ENST00000621161 SRCAPQ6ZRS2 3230 aa13.62□□□□□ -0.23
RAB11FIP4-211ENST00000621161 FAM218AQ96MZ4 157 aa13.61□□□□□ -0.23
RAB11FIP4-211ENST00000621161 A0A0D9SG42 100 aa13.61□□□□□ -0.23
RAB11FIP4-211ENST00000621161 USP24Q9UPU5 2620 aa13.6□□□□□ -0.23
RAB11FIP4-211ENST00000621161 K7EQZ3 153 aa13.6□□□□□ -0.23
RAB11FIP4-211ENST00000621161 RTL8CO15255 209 aa13.58□□□□□ -0.23
RAB11FIP4-211ENST00000621161 LINC01546A6NGU7 62 aa13.56□□□□□ -0.24
RAB11FIP4-211ENST00000621161 SMR3AQ99954 134 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms