RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 BPY2O14599 106 aa4.9□□□□□ -1.63
NEDD9-216ENST00000620854 BRK1Q8WUW1 75 aa4.9□□□□□ -1.63
NEDD9-216ENST00000620854 CSDC2Q9Y534 153 aaKnown RBP4.9□□□□□ -1.63
NEDD9-216ENST00000620854 SNURFQ9Y675 71 aa4.9□□□□□ -1.63
NEDD9-216ENST00000620854 C9orf116Q5BN46 136 aaPredicted RBP4.89□□□□□ -1.63
NEDD9-216ENST00000620854 LINC00959A0A1B0GUT2 108 aa4.89□□□□□ -1.63
NEDD9-216ENST00000620854 FSHBP01225 129 aa4.89□□□□□ -1.63
NEDD9-216ENST00000620854 RPL28P46779 137 aaKnown RBP4.89□□□□□ -1.63
NEDD9-216ENST00000620854 UNC79Q9P2D8 2635 aa4.89□□□□□ -1.63
NEDD9-216ENST00000620854 CCKP06307 115 aa4.88□□□□□ -1.63
NEDD9-216ENST00000620854 C2orf48Q96LS8 159 aa4.88□□□□□ -1.63
NEDD9-216ENST00000620854 TEP1Q99973 2627 aaKnown RBP4.88□□□□□ -1.63
NEDD9-216ENST00000620854 A8MTW9 85 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 PRR4Q16378 134 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 FAM19A1Q7Z5A9 133 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 LINC01561Q8N1V8 128 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 A0A096LNT2 108 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 IGLV1-51P01701 117 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 MP68P56378 58 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 SMIM9A6NGZ8 99 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 SERP2Q8N6R1 65 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 A0A0U1RQV1 116 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 FAM236DA0A1B0GTK5 79 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 FAM236CP0DP71 79 aa4.87□□□□□ -1.63
NEDD9-216ENST00000620854 CR1P17927 2039 aa4.86□□□□□ -1.63
NEDD9-216ENST00000620854 PDE6GP18545 87 aa4.86□□□□□ -1.63
NEDD9-216ENST00000620854 UNQ6190/PRO20217Q6UXQ8 127 aa4.86□□□□□ -1.63
NEDD9-216ENST00000620854 VWFP04275 2813 aa4.86□□□□□ -1.63
NEDD9-216ENST00000620854 UBE2AP49459 152 aa4.86□□□□□ -1.63
NEDD9-216ENST00000620854 PKIGQ9Y2B9 76 aa4.86□□□□□ -1.63
NEDD9-216ENST00000620854 H0Y9J4 135 aa4.85□□□□□ -1.63
NEDD9-216ENST00000620854 C4orf26Q17RF5 130 aa4.85□□□□□ -1.63
NEDD9-216ENST00000620854 CD164L2Q6UWJ8 174 aa4.85□□□□□ -1.63
NEDD9-216ENST00000620854 ITPR2Q14571 2701 aa4.85□□□□□ -1.63
NEDD9-216ENST00000620854 UBR5O95071 2799 aaPredicted RBP4.85□□□□□ -1.63
NEDD9-216ENST00000620854 IGHV3OR16-9A0A0B4J2B5 98 aa4.85□□□□□ -1.63
NEDD9-216ENST00000620854 CRYGAP11844 174 aa4.85□□□□□ -1.63
NEDD9-216ENST00000620854 LYRM9A8MSI8 78 aa4.84□□□□□ -1.63
NEDD9-216ENST00000620854 HRCT1Q6UXD1 115 aa4.84□□□□□ -1.63
NEDD9-216ENST00000620854 C11orf45Q8TAV5 145 aa4.84□□□□□ -1.63
NEDD9-216ENST00000620854 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.84□□□□□ -1.63
NEDD9-216ENST00000620854 DEFB131BA0A096LNP1 70 aa4.84□□□□□ -1.63
NEDD9-216ENST00000620854 MIFP14174 115 aa4.84□□□□□ -1.63
NEDD9-216ENST00000620854 CYSRT1A8MQ03 144 aa4.84□□□□□ -1.64
NEDD9-216ENST00000620854 NDUFB1O75438 58 aa4.83□□□□□ -1.64
NEDD9-216ENST00000620854 RPL37AP8A6NKH3 93 aa4.83□□□□□ -1.64
NEDD9-216ENST00000620854 FHL2Q14192 279 aa4.83□□□□□ -1.64
NEDD9-216ENST00000620854 Q8N3U1 123 aa4.83□□□□□ -1.64
NEDD9-216ENST00000620854 IGHV4-30-4P0DP06 118 aa4.83□□□□□ -1.64
NEDD9-216ENST00000620854 SYCNQ0VAF6 134 aa4.83□□□□□ -1.64
NEDD9-216ENST00000620854 CELA1Q9UNI1 258 aa4.83□□□□□ -1.64
NEDD9-216ENST00000620854 OXTP01178 125 aa4.82□□□□□ -1.64
NEDD9-216ENST00000620854 PDZD2O15018 2839 aa4.82□□□□□ -1.64
NEDD9-216ENST00000620854 A0A0J9YWU9 116 aa4.82□□□□□ -1.64
NEDD9-216ENST00000620854 ATP5EP2Q5VTU8 51 aa4.82□□□□□ -1.64
NEDD9-216ENST00000620854 Q6JHZ5 121 aa4.82□□□□□ -1.64
NEDD9-216ENST00000620854 WFDC10BQ8IUB3 73 aa4.82□□□□□ -1.64
NEDD9-216ENST00000620854 H3BQ85 93 aa4.82□□□□□ -1.64
NEDD9-216ENST00000620854 KPRPQ5T749 579 aaPredicted RBP4.82□□□□□ -1.64
NEDD9-216ENST00000620854 WFDC13Q8IUB5 93 aa4.82□□□□□ -1.64
NEDD9-216ENST00000620854 KRTAP1-3Q8IUG1 177 aa4.82□□□□□ -1.64
NEDD9-216ENST00000620854 A0A087WZ39 114 aa4.81□□□□□ -1.64
NEDD9-216ENST00000620854 SPTSSBQ8NFR3 76 aa4.81□□□□□ -1.64
NEDD9-216ENST00000620854 LRCOL1A6NCL2 159 aa4.81□□□□□ -1.64
NEDD9-216ENST00000620854 ZNF73O43830 326 aaPredicted RBP4.81□□□□□ -1.64
NEDD9-216ENST00000620854 Q8IZM0 81 aa4.81□□□□□ -1.64
NEDD9-216ENST00000620854 BAHCC1Q9P281 2608 aa4.81□□□□□ -1.64
NEDD9-216ENST00000620854 GIG44P09565 113 aaPredicted RBP4.81□□□□□ -1.64
NEDD9-216ENST00000620854 C6orf223Q8N319 242 aa4.81□□□□□ -1.64
NEDD9-216ENST00000620854 HIVEP1P15822 2718 aa4.8□□□□□ -1.64
NEDD9-216ENST00000620854 TRBV10-3A0A0K0K1G6 114 aa4.8□□□□□ -1.64
NEDD9-216ENST00000620854 M0R2N4 97 aa4.8□□□□□ -1.64
NEDD9-216ENST00000620854 NDUFC2O95298 119 aa4.8□□□□□ -1.64
NEDD9-216ENST00000620854 Q8N814 137 aa4.8□□□□□ -1.64
NEDD9-216ENST00000620854 FAM19A3Q7Z5A8 133 aa4.8□□□□□ -1.64
NEDD9-216ENST00000620854 KRTAP24-1Q3LI83 254 aa4.79□□□□□ -1.64
NEDD9-216ENST00000620854 PLAC8L1A1L4L8 177 aa4.79□□□□□ -1.64
NEDD9-216ENST00000620854 LELP1Q5T871 98 aa4.79□□□□□ -1.64
NEDD9-216ENST00000620854 PKD1L1Q8TDX9 2849 aa4.79□□□□□ -1.64
NEDD9-216ENST00000620854 IGKV4-1P06312 121 aa4.79□□□□□ -1.64
NEDD9-216ENST00000620854 SPATA3Q8NHX4 192 aa4.79□□□□□ -1.64
NEDD9-216ENST00000620854 RETNQ9HD89 108 aa4.78□□□□□ -1.64
NEDD9-216ENST00000620854 NANOS2P60321 138 aaKnown RBP4.78□□□□□ -1.64
NEDD9-216ENST00000620854 CHKB-CPT1BH3BT56 60 aa4.78□□□□□ -1.64
NEDD9-216ENST00000620854 Q8NDZ9 215 aa4.78□□□□□ -1.64
NEDD9-216ENST00000620854 IL17DQ8TAD2 202 aa4.78□□□□□ -1.64
NEDD9-216ENST00000620854 M0R378 163 aa4.77□□□□□ -1.65
NEDD9-216ENST00000620854 OBSCN-AS1Q96MR7 158 aa4.77□□□□□ -1.65
NEDD9-216ENST00000620854 FAM30AQ9NZY2 134 aa4.77□□□□□ -1.65
NEDD9-216ENST00000620854 TRAV10A0A0B4J240 114 aa4.77□□□□□ -1.65
NEDD9-216ENST00000620854 NDUFC2-KCTD14E9PQ53 114 aa4.77□□□□□ -1.65
NEDD9-216ENST00000620854 C10orf25Q5T742 122 aa4.77□□□□□ -1.65
NEDD9-216ENST00000620854 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
NEDD9-216ENST00000620854 KRTAP1-1Q07627 177 aa4.76□□□□□ -1.65
NEDD9-216ENST00000620854 Q8N9L7 120 aa4.76□□□□□ -1.65
NEDD9-216ENST00000620854 STAB1Q9NY15 2570 aa4.76□□□□□ -1.65
NEDD9-216ENST00000620854 COX17Q14061 63 aa4.75□□□□□ -1.65
NEDD9-216ENST00000620854 SPINK6Q6UWN8 80 aa4.75□□□□□ -1.65
NEDD9-216ENST00000620854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.75□□□□□ -1.65
NEDD9-216ENST00000620854 COL6A5A8TX70 2615 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms