RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 RETNQ9HD89 108 aa12.99□□□□□ -0.33
PCDHGB3-202ENST00000618934 CMYA5Q8N3K9 4069 aa12.98□□□□□ -0.33
PCDHGB3-202ENST00000618934 LYPD5Q6UWN5 251 aa12.98□□□□□ -0.33
PCDHGB3-202ENST00000618934 TENM3Q9P273 2699 aa12.97□□□□□ -0.33
PCDHGB3-202ENST00000618934 IGKV3D-7A0A0C4DH55 119 aa12.95□□□□□ -0.34
PCDHGB3-202ENST00000618934 OXLD1Q5BKU9 147 aa12.95□□□□□ -0.34
PCDHGB3-202ENST00000618934 S100A7L2Q5SY68 101 aa12.94□□□□□ -0.34
PCDHGB3-202ENST00000618934 A0A0J9YWU9 116 aa12.94□□□□□ -0.34
PCDHGB3-202ENST00000618934 C3orf22Q8N5N4 141 aa12.93□□□□□ -0.34
PCDHGB3-202ENST00000618934 RPL18AQ02543 176 aaKnown RBP12.93□□□□□ -0.34
PCDHGB3-202ENST00000618934 WFDC10BQ8IUB3 73 aa12.92□□□□□ -0.34
PCDHGB3-202ENST00000618934 WIPF1O43516 503 aa12.92□□□□□ -0.34
PCDHGB3-202ENST00000618934 C6orf48Q9UBA6 75 aa12.92□□□□□ -0.34
PCDHGB3-202ENST00000618934 A0A1B0GX51 115 aa12.91□□□□□ -0.34
PCDHGB3-202ENST00000618934 KRTAP10-11P60412 298 aa12.91□□□□□ -0.34
PCDHGB3-202ENST00000618934 C9orf153Q5TBE3 101 aa12.91□□□□□ -0.34
PCDHGB3-202ENST00000618934 XAGE1AQ9HD64 81 aa12.91□□□□□ -0.34
PCDHGB3-202ENST00000618934 LINC00575Q6W349 94 aa12.91□□□□□ -0.34
PCDHGB3-202ENST00000618934 CCKP06307 115 aa12.9□□□□□ -0.34
PCDHGB3-202ENST00000618934 UQCRQO14949 82 aa12.89□□□□□ -0.35
PCDHGB3-202ENST00000618934 TMEM256-PLSCR3K7ERE1 68 aa12.89□□□□□ -0.35
PCDHGB3-202ENST00000618934 IGLV6-57P01721 117 aa12.88□□□□□ -0.35
PCDHGB3-202ENST00000618934 HIST1H4AP62805 103 aaKnown RBP12.88□□□□□ -0.35
PCDHGB3-202ENST00000618934 HIGD2BQ4VC39 106 aa12.88□□□□□ -0.35
PCDHGB3-202ENST00000618934 KPRPQ5T749 579 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB3-202ENST00000618934 STAB1Q9NY15 2570 aa12.88□□□□□ -0.35
PCDHGB3-202ENST00000618934 FBN1P35555 2871 aaKnown RBP12.88□□□□□ -0.35
PCDHGB3-202ENST00000618934 A0A087WVE0 104 aa12.87□□□□□ -0.35
PCDHGB3-202ENST00000618934 C2orf48Q96LS8 159 aa12.87□□□□□ -0.35
PCDHGB3-202ENST00000618934 Q6ZTC4 211 aa12.87□□□□□ -0.35
PCDHGB3-202ENST00000618934 F8P00451 2351 aa12.86□□□□□ -0.35
PCDHGB3-202ENST00000618934 Q6JHZ5 121 aa12.86□□□□□ -0.35
PCDHGB3-202ENST00000618934 TRBV10-3A0A0K0K1G6 114 aa12.85□□□□□ -0.35
PCDHGB3-202ENST00000618934 KRTAP26-1Q6PEX3 210 aa12.85□□□□□ -0.35
PCDHGB3-202ENST00000618934 GVQW2A0A096LPI5 108 aaPredicted RBP12.84□□□□□ -0.35
PCDHGB3-202ENST00000618934 hADV29S1A0JD25 119 aa12.84□□□□□ -0.35
PCDHGB3-202ENST00000618934 JMJD7-PLA2G4BH0Y9G9 81 aa12.84□□□□□ -0.35
PCDHGB3-202ENST00000618934 COX7CP15954 63 aa12.84□□□□□ -0.35
PCDHGB3-202ENST00000618934 ESRGQ1W209 222 aa12.81□□□□□ -0.36
PCDHGB3-202ENST00000618934 MUC7Q8TAX7 377 aa12.81□□□□□ -0.36
PCDHGB3-202ENST00000618934 M0R2N4 97 aa12.8□□□□□ -0.36
PCDHGB3-202ENST00000618934 ATOX1O00244 68 aa12.8□□□□□ -0.36
PCDHGB3-202ENST00000618934 Q6ZQY7 126 aa12.79□□□□□ -0.36
PCDHGB3-202ENST00000618934 FLNBO75369 2602 aaKnown RBP12.79□□□□□ -0.36
PCDHGB3-202ENST00000618934 DNAH3Q8TD57 4116 aa12.79□□□□□ -0.36
PCDHGB3-202ENST00000618934 Q6ZRU5 148 aa12.79□□□□□ -0.36
PCDHGB3-202ENST00000618934 C15orf56Q8N910 161 aa12.79□□□□□ -0.36
PCDHGB3-202ENST00000618934 CAMK2N2Q96S95 79 aa12.79□□□□□ -0.36
PCDHGB3-202ENST00000618934 ZNF561-AS1K7EIQ3 104 aa12.78□□□□□ -0.36
PCDHGB3-202ENST00000618934 CYSTM1Q9H1C7 97 aa12.78□□□□□ -0.36
PCDHGB3-202ENST00000618934 TRAV23DV6A0A075B6W5 121 aa12.78□□□□□ -0.36
PCDHGB3-202ENST00000618934 NOTCH1P46531 2555 aa12.77□□□□□ -0.37
PCDHGB3-202ENST00000618934 MAST4O15021 2626 aa12.76□□□□□ -0.37
PCDHGB3-202ENST00000618934 LAMTOR3Q9UHA4 124 aa12.76□□□□□ -0.37
PCDHGB3-202ENST00000618934 H3BNG1 76 aa12.76□□□□□ -0.37
PCDHGB3-202ENST00000618934 CRYGAP11844 174 aa12.76□□□□□ -0.37
PCDHGB3-202ENST00000618934 VPREB1P12018 145 aa12.76□□□□□ -0.37
PCDHGB3-202ENST00000618934 Q6ZQT0 140 aa12.76□□□□□ -0.37
PCDHGB3-202ENST00000618934 RBM3P98179 157 aaKnown RBP12.75□□□□□ -0.37
PCDHGB3-202ENST00000618934 ZNF73O43830 326 aaPredicted RBP12.73□□□□□ -0.37
PCDHGB3-202ENST00000618934 FAM19A1Q7Z5A9 133 aa12.73□□□□□ -0.37
PCDHGB3-202ENST00000618934 DIRC1Q969H9 104 aa12.73□□□□□ -0.37
PCDHGB3-202ENST00000618934 LOC107984640A0A0U1RRK4 108 aa12.71□□□□□ -0.37
PCDHGB3-202ENST00000618934 USP17L23D6RBM5 183 aa12.71□□□□□ -0.37
PCDHGB3-202ENST00000618934 KRTAP24-1Q3LI83 254 aa12.71□□□□□ -0.37
PCDHGB3-202ENST00000618934 EGFEM1PQ0D2K5 195 aa12.71□□□□□ -0.38
PCDHGB3-202ENST00000618934 COX7BP24311 80 aa12.69□□□□□ -0.38
PCDHGB3-202ENST00000618934 Q6ZRP5 223 aa12.69□□□□□ -0.38
PCDHGB3-202ENST00000618934 SERP2Q8N6R1 65 aa12.69□□□□□ -0.38
PCDHGB3-202ENST00000618934 IGKV2D-24A0A075B6R9 120 aa12.69□□□□□ -0.38
PCDHGB3-202ENST00000618934 LOC110117498A0A087WWA1 95 aa12.69□□□□□ -0.38
PCDHGB3-202ENST00000618934 DEFB131BA0A096LNP1 70 aa12.69□□□□□ -0.38
PCDHGB3-202ENST00000618934 ELOF1P60002 83 aaKnown RBP12.68□□□□□ -0.38
PCDHGB3-202ENST00000618934 UPK3BQ9BT76 320 aa12.68□□□□□ -0.38
PCDHGB3-202ENST00000618934 NDUFC2-KCTD14E9PQ53 114 aa12.68□□□□□ -0.38
PCDHGB3-202ENST00000618934 C1orf43Q9BWL3 253 aa12.67□□□□□ -0.38
PCDHGB3-202ENST00000618934 UBL5Q9BZL1 73 aa12.67□□□□□ -0.38
PCDHGB3-202ENST00000618934 M0R378 163 aa12.66□□□□□ -0.38
PCDHGB3-202ENST00000618934 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
PCDHGB3-202ENST00000618934 C11orf45Q8TAV5 145 aa12.65□□□□□ -0.38
PCDHGB3-202ENST00000618934 DSCR8Q96T75 97 aa12.64□□□□□ -0.39
PCDHGB3-202ENST00000618934 NBEAL1Q6ZS30 2694 aa12.63□□□□□ -0.39
PCDHGB3-202ENST00000618934 DNAH1Q9P2D7 4330 aa12.62□□□□□ -0.39
PCDHGB3-202ENST00000618934 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.62□□□□□ -0.39
PCDHGB3-202ENST00000618934 ATP5EP2Q5VTU8 51 aa12.62□□□□□ -0.39
PCDHGB3-202ENST00000618934 PRB2P02812 416 aaPredicted RBP12.61□□□□□ -0.39
PCDHGB3-202ENST00000618934 Q6ZVQ6 151 aa12.61□□□□□ -0.39
PCDHGB3-202ENST00000618934 LINC00528Q8N1L1 170 aa12.61□□□□□ -0.39
PCDHGB3-202ENST00000618934 J3KT08 172 aa12.6□□□□□ -0.39
PCDHGB3-202ENST00000618934 SYCNQ0VAF6 134 aa12.6□□□□□ -0.39
PCDHGB3-202ENST00000618934 TRBV7-6A0A0J9YX20 115 aa12.59□□□□□ -0.39
PCDHGB3-202ENST00000618934 LINC01547P58512 204 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB3-202ENST00000618934 SERTAD4-AS1Q5TG53 156 aa12.59□□□□□ -0.39
PCDHGB3-202ENST00000618934 TRBV7-4A0A0J9YYF1 115 aa12.59□□□□□ -0.39
PCDHGB3-202ENST00000618934 CASC10Q5T4H9 136 aa12.59□□□□□ -0.39
PCDHGB3-202ENST00000618934 HAMPP81172 84 aa12.58□□□□□ -0.4
PCDHGB3-202ENST00000618934 GHRHP01286 108 aa12.58□□□□□ -0.4
PCDHGB3-202ENST00000618934 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.4
PCDHGB3-202ENST00000618934 COL6A5A8TX70 2615 aa12.57□□□□□ -0.4
PCDHGB3-202ENST00000618934 DNAH10OSP0CZ25 163 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms