RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 NKAPP1Q8N9T2 125 aa13.23□□□□□ -0.29
SYNGR3-206ENST00000618464 ZNF625Q96I27 306 aaPredicted RBP13.23□□□□□ -0.29
SYNGR3-206ENST00000618464 BCE1O60756 84 aa13.22□□□□□ -0.29
SYNGR3-206ENST00000618464 IGLV5-37A0A075B6J1 123 aa13.21□□□□□ -0.29
SYNGR3-206ENST00000618464 ERG28Q9UKR5 140 aa13.21□□□□□ -0.29
SYNGR3-206ENST00000618464 LPAP08519 4548 aa13.2□□□□□ -0.3
SYNGR3-206ENST00000618464 RPL28P46779 137 aaKnown RBP13.19□□□□□ -0.3
SYNGR3-206ENST00000618464 SND1-IT1Q9HBX3 110 aa13.19□□□□□ -0.3
SYNGR3-206ENST00000618464 MAP1LC3CQ9BXW4 147 aa13.18□□□□□ -0.3
SYNGR3-206ENST00000618464 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
SYNGR3-206ENST00000618464 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
SYNGR3-206ENST00000618464 RPL13AP40429 203 aaKnown RBP13.16□□□□□ -0.3
SYNGR3-206ENST00000618464 VPREB1P12018 145 aa13.14□□□□□ -0.31
SYNGR3-206ENST00000618464 UBE2AP49459 152 aa13.14□□□□□ -0.31
SYNGR3-206ENST00000618464 COX17Q14061 63 aa13.14□□□□□ -0.31
SYNGR3-206ENST00000618464 COA6Q5JTJ3 125 aaKnown RBP13.14□□□□□ -0.31
SYNGR3-206ENST00000618464 TMEM223A0PJW6 202 aa13.13□□□□□ -0.31
SYNGR3-206ENST00000618464 SFTA2Q6UW10 78 aa13.13□□□□□ -0.31
SYNGR3-206ENST00000618464 PLNP26678 52 aa13.12□□□□□ -0.31
SYNGR3-206ENST00000618464 DPM2O94777 84 aa13.11□□□□□ -0.31
SYNGR3-206ENST00000618464 LINC00158P58513 81 aa13.11□□□□□ -0.31
SYNGR3-206ENST00000618464 Q8NDZ9 215 aa13.11□□□□□ -0.31
SYNGR3-206ENST00000618464 A0A0U1RRA0 63 aa13.1□□□□□ -0.31
SYNGR3-206ENST00000618464 RPL24P83731 157 aaKnown RBP13.1□□□□□ -0.31
SYNGR3-206ENST00000618464 KRTAP13-1Q8IUC0 172 aa13.09□□□□□ -0.31
SYNGR3-206ENST00000618464 PMCHL2Q9BQD1 86 aa13.09□□□□□ -0.31
SYNGR3-206ENST00000618464 A0A087X002 238 aa13.08□□□□□ -0.32
SYNGR3-206ENST00000618464 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
SYNGR3-206ENST00000618464 SYS1-DBNDD2H3BUS1 97 aa13.08□□□□□ -0.32
SYNGR3-206ENST00000618464 IGKCP01834 107 aa13.08□□□□□ -0.32
SYNGR3-206ENST00000618464 ANAPC11Q9NYG5 84 aa13.08□□□□□ -0.32
SYNGR3-206ENST00000618464 PRLHP81277 87 aa13.06□□□□□ -0.32
SYNGR3-206ENST00000618464 HERVK_113P61574 105 aa13.05□□□□□ -0.32
SYNGR3-206ENST00000618464 FAM19A1Q7Z5A9 133 aa13.05□□□□□ -0.32
SYNGR3-206ENST00000618464 TMEM126AQ9H061 195 aa13.05□□□□□ -0.32
SYNGR3-206ENST00000618464 S100A6P06703 90 aa13.04□□□□□ -0.32
SYNGR3-206ENST00000618464 SMIM13P0DJ93 91 aa13.04□□□□□ -0.32
SYNGR3-206ENST00000618464 CRYGAP11844 174 aa13.04□□□□□ -0.32
SYNGR3-206ENST00000618464 PET117Q6UWS5 81 aa13.04□□□□□ -0.32
SYNGR3-206ENST00000618464 KRTDAPP60985 99 aa13.03□□□□□ -0.32
SYNGR3-206ENST00000618464 MEIG1Q5JSS6 88 aa13.03□□□□□ -0.32
SYNGR3-206ENST00000618464 TYMSOSQ8TAI1 123 aa13.03□□□□□ -0.32
SYNGR3-206ENST00000618464 M0R378 163 aa13.02□□□□□ -0.33
SYNGR3-206ENST00000618464 TSPAN13O95857 204 aa13.02□□□□□ -0.33
SYNGR3-206ENST00000618464 C3orf79P0CE67 100 aa13.01□□□□□ -0.33
SYNGR3-206ENST00000618464 S100A2P29034 98 aa13.01□□□□□ -0.33
SYNGR3-206ENST00000618464 PRR4Q16378 134 aa13.01□□□□□ -0.33
SYNGR3-206ENST00000618464 PLEKHB2Q96CS7 222 aa13□□□□□ -0.33
SYNGR3-206ENST00000618464 NDUFA12Q9UI09 145 aa13□□□□□ -0.33
SYNGR3-206ENST00000618464 LEPROTO15243 131 aa12.99□□□□□ -0.33
SYNGR3-206ENST00000618464 LINC01545Q5VT33 79 aa12.99□□□□□ -0.33
SYNGR3-206ENST00000618464 C20orf202A1L168 122 aa12.98□□□□□ -0.33
SYNGR3-206ENST00000618464 HERV-K104P63124 156 aa12.98□□□□□ -0.33
SYNGR3-206ENST00000618464 BOD1L2Q8IYS8 172 aa12.98□□□□□ -0.33
SYNGR3-206ENST00000618464 MIR7-3HGQ8N6C7 128 aa12.98□□□□□ -0.33
SYNGR3-206ENST00000618464 MYMXA0A1B0GTQ4 84 aa12.97□□□□□ -0.33
SYNGR3-206ENST00000618464 KRTAP13-2Q52LG2 175 aa12.97□□□□□ -0.33
SYNGR3-206ENST00000618464 NCR3O14931 201 aa12.96□□□□□ -0.33
SYNGR3-206ENST00000618464 LGALS3P17931 250 aaKnown RBP12.96□□□□□ -0.33
SYNGR3-206ENST00000618464 TSPEAR-AS2P59090 65 aa12.96□□□□□ -0.33
SYNGR3-206ENST00000618464 HIST3H2BBQ8N257 126 aa12.96□□□□□ -0.33
SYNGR3-206ENST00000618464 J3QQQ9 107 aa12.95□□□□□ -0.34
SYNGR3-206ENST00000618464 FAM229BQ4G0N7 80 aa12.94□□□□□ -0.34
SYNGR3-206ENST00000618464 LINC00587B1AMM8 73 aa12.93□□□□□ -0.34
SYNGR3-206ENST00000618464 HIGD2AQ9BW72 106 aa12.93□□□□□ -0.34
SYNGR3-206ENST00000618464 HIST1H2BLQ99880 126 aa12.92□□□□□ -0.34
SYNGR3-206ENST00000618464 E9PLD3 99 aa12.91□□□□□ -0.34
SYNGR3-206ENST00000618464 NMUP48645 174 aa12.91□□□□□ -0.34
SYNGR3-206ENST00000618464 SNRPEP62304 92 aaKnown RBP12.91□□□□□ -0.34
SYNGR3-206ENST00000618464 IGKV2D-26A0A0A0MRZ7 120 aa12.9□□□□□ -0.34
SYNGR3-206ENST00000618464 AKR1D1P51857 326 aa12.9□□□□□ -0.34
SYNGR3-206ENST00000618464 DAND5Q8N907 189 aa12.9□□□□□ -0.34
SYNGR3-206ENST00000618464 PRYO14603 147 aa12.88□□□□□ -0.35
SYNGR3-206ENST00000618464 MUC2Q02817 5179 aa12.87□□□□□ -0.35
SYNGR3-206ENST00000618464 LINC00304Q8N9R0 145 aa12.87□□□□□ -0.35
SYNGR3-206ENST00000618464 TRBV10-3A0A0K0K1G6 114 aa12.85□□□□□ -0.35
SYNGR3-206ENST00000618464 C5orf52A6NGY3 159 aa12.84□□□□□ -0.35
SYNGR3-206ENST00000618464 ATOH7Q8N100 152 aa12.84□□□□□ -0.35
SYNGR3-206ENST00000618464 C3orf22Q8N5N4 141 aa12.84□□□□□ -0.35
SYNGR3-206ENST00000618464 KCNQ1DNQ9H478 68 aa12.84□□□□□ -0.35
SYNGR3-206ENST00000618464 SPRR4Q96PI1 79 aa12.83□□□□□ -0.36
SYNGR3-206ENST00000618464 ETDCA0A1B0GVM5 59 aa12.82□□□□□ -0.36
SYNGR3-206ENST00000618464 LINC00337Q8N6G1 96 aa12.82□□□□□ -0.36
SYNGR3-206ENST00000618464 SPRR1AP35321 89 aa12.81□□□□□ -0.36
SYNGR3-206ENST00000618464 RETNLBQ9BQ08 111 aa12.81□□□□□ -0.36
SYNGR3-206ENST00000618464 LOC107984156A0A0G2JMH3 177 aa12.79□□□□□ -0.36
SYNGR3-206ENST00000618464 A0A0J9YXY3 114 aa12.79□□□□□ -0.36
SYNGR3-206ENST00000618464 KRTAP4-16G5E9R7 235 aaPredicted RBP12.79□□□□□ -0.36
SYNGR3-206ENST00000618464 ARL17AQ8IVW1 177 aa12.79□□□□□ -0.36
SYNGR3-206ENST00000618464 MIEN1Q9BRT3 115 aa12.79□□□□□ -0.36
SYNGR3-206ENST00000618464 ZNF706Q9Y5V0 76 aaPredicted RBP12.79□□□□□ -0.36
SYNGR3-206ENST00000618464 ZNF815PA8K554 130 aa12.78□□□□□ -0.36
SYNGR3-206ENST00000618464 DDTP30046 118 aa12.78□□□□□ -0.36
SYNGR3-206ENST00000618464 SMCR5Q8TEV8 140 aa12.78□□□□□ -0.36
SYNGR3-206ENST00000618464 NPC2P61916 151 aa12.77□□□□□ -0.37
SYNGR3-206ENST00000618464 S100A12P80511 92 aa12.77□□□□□ -0.37
SYNGR3-206ENST00000618464 HSBP1L1C9JCN9 74 aa12.76□□□□□ -0.37
SYNGR3-206ENST00000618464 SCGB1D1O95968 90 aa12.76□□□□□ -0.37
SYNGR3-206ENST00000618464 ANKRD39Q53RE8 183 aa12.76□□□□□ -0.37
SYNGR3-206ENST00000618464 PPDPFQ9H3Y8 114 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms