RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 TRBV7-7A0A0K0K1E9 115 aa12.36□□□□□ -0.43
ATXN2-227ENST00000616825 SMCR5Q8TEV8 140 aa12.36□□□□□ -0.43
ATXN2-227ENST00000616825 PCOTHQ58A44 107 aa12.35□□□□□ -0.43
ATXN2-227ENST00000616825 DEFB116Q30KQ4 102 aa12.35□□□□□ -0.43
ATXN2-227ENST00000616825 SOSTDC1Q6X4U4 206 aa12.33□□□□□ -0.44
ATXN2-227ENST00000616825 H0Y9P7 68 aa12.31□□□□□ -0.44
ATXN2-227ENST00000616825 TMEM254Q8TBM7 123 aa12.31□□□□□ -0.44
ATXN2-227ENST00000616825 X6R8D5 127 aa12.3□□□□□ -0.44
ATXN2-227ENST00000616825 LIMD2Q9BT23 127 aa12.3□□□□□ -0.44
ATXN2-227ENST00000616825 FAM19A4Q96LR4 140 aa12.29□□□□□ -0.44
ATXN2-227ENST00000616825 HCG22E2RYF7 251 aa12.28□□□□□ -0.44
ATXN2-227ENST00000616825 MDFIQ99750 246 aa12.28□□□□□ -0.44
ATXN2-227ENST00000616825 RETNLBQ9BQ08 111 aa12.28□□□□□ -0.44
ATXN2-227ENST00000616825 SPINK1P00995 79 aa12.27□□□□□ -0.45
ATXN2-227ENST00000616825 SBSPONQ8IVN8 264 aa12.27□□□□□ -0.45
ATXN2-227ENST00000616825 LINC00167Q96N53 147 aa12.27□□□□□ -0.45
ATXN2-227ENST00000616825 H3BNG1 76 aa12.26□□□□□ -0.45
ATXN2-227ENST00000616825 KIAA0087Q14695 138 aa12.26□□□□□ -0.45
ATXN2-227ENST00000616825 LINC01546A6NGU7 62 aa12.24□□□□□ -0.45
ATXN2-227ENST00000616825 C6orf48Q9UBA6 75 aa12.24□□□□□ -0.45
ATXN2-227ENST00000616825 IGLV5-45A0A087WSX0 123 aa12.23□□□□□ -0.45
ATXN2-227ENST00000616825 CXCL6P80162 114 aa12.23□□□□□ -0.45
ATXN2-227ENST00000616825 hDV103S1A0JD37 113 aa12.23□□□□□ -0.45
ATXN2-227ENST00000616825 C5orf42Q9H799 3197 aa12.22□□□□□ -0.45
ATXN2-227ENST00000616825 CDIP1Q9H305 208 aa12.22□□□□□ -0.45
ATXN2-227ENST00000616825 PMAIP1Q13794 54 aa12.22□□□□□ -0.45
ATXN2-227ENST00000616825 Q9UF83 564 aa12.21□□□□□ -0.45
ATXN2-227ENST00000616825 SPATA3Q8NHX4 192 aa12.21□□□□□ -0.45
ATXN2-227ENST00000616825 C1orf195Q5TG92 126 aa12.21□□□□□ -0.46
ATXN2-227ENST00000616825 KRTAP24-1Q3LI83 254 aa12.19□□□□□ -0.46
ATXN2-227ENST00000616825 C1orf64Q8NEQ6 169 aa12.19□□□□□ -0.46
ATXN2-227ENST00000616825 IGKV2D-30A0A075B6S6 120 aa12.18□□□□□ -0.46
ATXN2-227ENST00000616825 IGKV2-30P06310 120 aa12.18□□□□□ -0.46
ATXN2-227ENST00000616825 STAB1Q9NY15 2570 aa12.18□□□□□ -0.46
ATXN2-227ENST00000616825 LAMA2P24043 3122 aaKnown RBP12.17□□□□□ -0.46
ATXN2-227ENST00000616825 PSPHP1O15172 72 aa12.16□□□□□ -0.46
ATXN2-227ENST00000616825 MOBPQ13875 183 aa12.16□□□□□ -0.46
ATXN2-227ENST00000616825 SPACA4Q8TDM5 124 aa12.16□□□□□ -0.46
ATXN2-227ENST00000616825 A0A1B0GW54 56 aa12.14□□□□□ -0.47
ATXN2-227ENST00000616825 LAMA3Q16787 3333 aa12.12□□□□□ -0.47
ATXN2-227ENST00000616825 Q8NAQ8 132 aa12.11□□□□□ -0.47
ATXN2-227ENST00000616825 TP53AIP1Q9HCN2 124 aa12.11□□□□□ -0.47
ATXN2-227ENST00000616825 PRO0461Q9UI25 63 aa12.11□□□□□ -0.47
ATXN2-227ENST00000616825 PTPRBP23467 1997 aa12.11□□□□□ -0.47
ATXN2-227ENST00000616825 BRCA2P51587 3418 aa12.1□□□□□ -0.47
ATXN2-227ENST00000616825 ELOF1P60002 83 aaKnown RBP12.1□□□□□ -0.47
ATXN2-227ENST00000616825 SMIM29Q86T20 159 aa12.1□□□□□ -0.47
ATXN2-227ENST00000616825 Q8NBF4 154 aa12.1□□□□□ -0.47
ATXN2-227ENST00000616825 NBDYA0A0U1RRE5 68 aa12.09□□□□□ -0.47
ATXN2-227ENST00000616825 CRYGAP11844 174 aa12.09□□□□□ -0.47
ATXN2-227ENST00000616825 SMCPP49901 116 aaPredicted RBP12.09□□□□□ -0.47
ATXN2-227ENST00000616825 RANBP2P49792 3224 aaKnown RBP12.09□□□□□ -0.47
ATXN2-227ENST00000616825 Q6ZRX8 168 aa12.08□□□□□ -0.48
ATXN2-227ENST00000616825 FAM218AQ96MZ4 157 aa12.08□□□□□ -0.48
ATXN2-227ENST00000616825 CENPEQ02224 2701 aa12.08□□□□□ -0.48
ATXN2-227ENST00000616825 PHF5AQ7RTV0 110 aaKnown RBP12.06□□□□□ -0.48
ATXN2-227ENST00000616825 LINC00588Q9Y4M8 146 aa12.06□□□□□ -0.48
ATXN2-227ENST00000616825 KLK9Q2XQG4 91 aa12.06□□□□□ -0.48
ATXN2-227ENST00000616825 HELZ2Q9BYK8 2649 aaKnown RBP12.05□□□□□ -0.48
ATXN2-227ENST00000616825 BCE1O60756 84 aa12.05□□□□□ -0.48
ATXN2-227ENST00000616825 LINC00476Q8WZB0 136 aa12.04□□□□□ -0.48
ATXN2-227ENST00000616825 C16orf90A8MZG2 172 aa12.04□□□□□ -0.48
ATXN2-227ENST00000616825 Q6ZRP5 223 aa12.04□□□□□ -0.48
ATXN2-227ENST00000616825 EPM2AB3EWF7 344 aa12.02□□□□□ -0.49
ATXN2-227ENST00000616825 RTL8CO15255 209 aa12.02□□□□□ -0.49
ATXN2-227ENST00000616825 GVQW2A0A096LPI5 108 aaPredicted RBP12.01□□□□□ -0.49
ATXN2-227ENST00000616825 FAM229AH3BQW9 127 aa12.01□□□□□ -0.49
ATXN2-227ENST00000616825 MKI67P46013 3256 aaKnown RBP12.01□□□□□ -0.49
ATXN2-227ENST00000616825 SETXQ7Z333 2677 aaKnown RBP12□□□□□ -0.49
ATXN2-227ENST00000616825 Q6ZQT0 140 aa12□□□□□ -0.49
ATXN2-227ENST00000616825 FLNAP21333 2647 aaKnown RBP11.99□□□□□ -0.49
ATXN2-227ENST00000616825 HTTP42858 3142 aa11.99□□□□□ -0.49
ATXN2-227ENST00000616825 C7orf65Q6ZTY9 151 aa11.99□□□□□ -0.49
ATXN2-227ENST00000616825 AKAP13Q12802 2813 aa11.98□□□□□ -0.49
ATXN2-227ENST00000616825 XIRP2A4UGR9 3374 aa11.98□□□□□ -0.49
ATXN2-227ENST00000616825 ACYP2P14621 99 aa11.98□□□□□ -0.49
ATXN2-227ENST00000616825 LOC110117498A0A087WWA1 95 aa11.98□□□□□ -0.49
ATXN2-227ENST00000616825 DNAH10OSP0CZ25 163 aa11.98□□□□□ -0.49
ATXN2-227ENST00000616825 CHD7Q9P2D1 2997 aa11.97□□□□□ -0.49
ATXN2-227ENST00000616825 TYMSOSQ8TAI1 123 aa11.97□□□□□ -0.49
ATXN2-227ENST00000616825 ST20-AS1Q8NBB2 130 aa11.96□□□□□ -0.49
ATXN2-227ENST00000616825 CHTF8P0CG12 524 aa11.96□□□□□ -0.5
ATXN2-227ENST00000616825 A0A1B0GU69 56 aa11.95□□□□□ -0.5
ATXN2-227ENST00000616825 TRAV22A0A0B4J277 110 aa11.95□□□□□ -0.5
ATXN2-227ENST00000616825 H3BPC8 53 aa11.95□□□□□ -0.5
ATXN2-227ENST00000616825 ITPR3Q14573 2671 aa11.95□□□□□ -0.5
ATXN2-227ENST00000616825 WWC2-AS2Q96NR7 200 aa11.94□□□□□ -0.5
ATXN2-227ENST00000616825 VPREB1P12018 145 aa11.94□□□□□ -0.5
ATXN2-227ENST00000616825 LINC00313P59037 77 aa11.93□□□□□ -0.5
ATXN2-227ENST00000616825 COL27A1Q8IZC6 1860 aaPredicted RBP11.91□□□□□ -0.5
ATXN2-227ENST00000616825 CFAP46Q8IYW2 2715 aa11.91□□□□□ -0.5
ATXN2-227ENST00000616825 UNC80Q8N2C7 3258 aa11.91□□□□□ -0.5
ATXN2-227ENST00000616825 COL4A2P08572 1712 aa11.89□□□□□ -0.51
ATXN2-227ENST00000616825 TRBV7-4A0A0J9YYF1 115 aa11.89□□□□□ -0.51
ATXN2-227ENST00000616825 LITAFQ99732 161 aa11.89□□□□□ -0.51
ATXN2-227ENST00000616825 CFAP54Q96N23 3096 aa11.89□□□□□ -0.51
ATXN2-227ENST00000616825 IGLV6-57P01721 117 aa11.89□□□□□ -0.51
ATXN2-227ENST00000616825 CSNK1G2-AS1Q8NCQ2 148 aa11.87□□□□□ -0.51
ATXN2-227ENST00000616825 SPAG11AQ6PDA7 123 aa11.84□□□□□ -0.51
ATXN2-227ENST00000616825 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms