RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 IGKV2D-28P01615 120 aa13.33□□□□□ -0.28
CBWD3-212ENST00000616550 KRTAP1-4P0C5Y4 121 aa13.33□□□□□ -0.28
CBWD3-212ENST00000616550 MEIG1Q5JSS6 88 aa13.33□□□□□ -0.28
CBWD3-212ENST00000616550 NDUFA12Q9UI09 145 aa13.32□□□□□ -0.28
CBWD3-212ENST00000616550 MYMXA0A1B0GTQ4 84 aa13.31□□□□□ -0.28
CBWD3-212ENST00000616550 LINC00587B1AMM8 73 aa13.31□□□□□ -0.28
CBWD3-212ENST00000616550 DPM2O94777 84 aa13.31□□□□□ -0.28
CBWD3-212ENST00000616550 SMIM13P0DJ93 91 aa13.31□□□□□ -0.28
CBWD3-212ENST00000616550 MAP1LC3CQ9BXW4 147 aa13.31□□□□□ -0.28
CBWD3-212ENST00000616550 LEPROTO15243 131 aa13.3□□□□□ -0.28
CBWD3-212ENST00000616550 UBE2AP49459 152 aa13.3□□□□□ -0.28
CBWD3-212ENST00000616550 PLEKHB2Q96CS7 222 aa13.3□□□□□ -0.28
CBWD3-212ENST00000616550 PMCHL2Q9BQD1 86 aa13.3□□□□□ -0.28
CBWD3-212ENST00000616550 HIST1H2BKO60814 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 IGKCP01834 107 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST1H2BJP06899 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST1H2BOP23527 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST1H2BBP33778 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST1H2BDP58876 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HERVK_113P61574 105 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST1H2BCP62807 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST2H2BEQ16778 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST1H2BHQ93079 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST1H2BNQ99877 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 HIST1H2BMQ99879 126 aa13.29□□□□□ -0.28
CBWD3-212ENST00000616550 Q8NDZ9 215 aa13.28□□□□□ -0.28
CBWD3-212ENST00000616550 RPL13AP40429 203 aaKnown RBP13.27□□□□□ -0.29
CBWD3-212ENST00000616550 MIR7-3HGQ8N6C7 128 aa13.26□□□□□ -0.29
CBWD3-212ENST00000616550 TSPEAR-AS2P59090 65 aa13.25□□□□□ -0.29
CBWD3-212ENST00000616550 J3QQQ9 107 aa13.24□□□□□ -0.29
CBWD3-212ENST00000616550 BOD1L2Q8IYS8 172 aa13.24□□□□□ -0.29
CBWD3-212ENST00000616550 TMEM126AQ9H061 195 aa13.24□□□□□ -0.29
CBWD3-212ENST00000616550 TMEM238C9JI98 176 aa13.23□□□□□ -0.29
CBWD3-212ENST00000616550 M0R378 163 aa13.23□□□□□ -0.29
CBWD3-212ENST00000616550 LGALS3P17931 250 aaKnown RBP13.23□□□□□ -0.29
CBWD3-212ENST00000616550 FAM19A1Q7Z5A9 133 aa13.23□□□□□ -0.29
CBWD3-212ENST00000616550 KRTAP13-1Q8IUC0 172 aa13.23□□□□□ -0.29
CBWD3-212ENST00000616550 NMUP48645 174 aa13.22□□□□□ -0.29
CBWD3-212ENST00000616550 HMCN2Q8NDA2 5059 aa13.22□□□□□ -0.29
CBWD3-212ENST00000616550 SYS1-DBNDD2H3BUS1 97 aa13.2□□□□□ -0.3
CBWD3-212ENST00000616550 PRLHP81277 87 aa13.19□□□□□ -0.3
CBWD3-212ENST00000616550 NCR3O14931 201 aa13.17□□□□□ -0.3
CBWD3-212ENST00000616550 CRYGAP11844 174 aa13.17□□□□□ -0.3
CBWD3-212ENST00000616550 IGKV2D-26A0A0A0MRZ7 120 aa13.16□□□□□ -0.3
CBWD3-212ENST00000616550 DAND5Q8N907 189 aa13.16□□□□□ -0.3
CBWD3-212ENST00000616550 E9PLD3 99 aa13.15□□□□□ -0.3
CBWD3-212ENST00000616550 A0A087X002 238 aa13.14□□□□□ -0.31
CBWD3-212ENST00000616550 PET117Q6UWS5 81 aa13.14□□□□□ -0.31
CBWD3-212ENST00000616550 LOC107984156A0A0G2JMH3 177 aa13.13□□□□□ -0.31
CBWD3-212ENST00000616550 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
CBWD3-212ENST00000616550 LINC01545Q5VT33 79 aa13.13□□□□□ -0.31
CBWD3-212ENST00000616550 ARL17AQ8IVW1 177 aa13.13□□□□□ -0.31
CBWD3-212ENST00000616550 ANAPC11Q9NYG5 84 aa13.13□□□□□ -0.31
CBWD3-212ENST00000616550 PRYO14603 147 aa13.12□□□□□ -0.31
CBWD3-212ENST00000616550 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
CBWD3-212ENST00000616550 UBR4Q5T4S7 5183 aa13.11□□□□□ -0.31
CBWD3-212ENST00000616550 TYMSOSQ8TAI1 123 aa13.11□□□□□ -0.31
CBWD3-212ENST00000616550 S100A12P80511 92 aa13.1□□□□□ -0.31
CBWD3-212ENST00000616550 FAM229BQ4G0N7 80 aa13.1□□□□□ -0.31
CBWD3-212ENST00000616550 KCNQ1DNQ9H478 68 aa13.1□□□□□ -0.31
CBWD3-212ENST00000616550 A0A0J9YXY3 114 aa13.09□□□□□ -0.31
CBWD3-212ENST00000616550 C3orf79P0CE67 100 aa13.09□□□□□ -0.31
CBWD3-212ENST00000616550 HIGD2AQ9BW72 106 aa13.09□□□□□ -0.31
CBWD3-212ENST00000616550 TRBV10-3A0A0K0K1G6 114 aa13.08□□□□□ -0.32
CBWD3-212ENST00000616550 KRTDAPP60985 99 aa13.07□□□□□ -0.32
CBWD3-212ENST00000616550 TRBV10-2A0A0K0K1G8 114 aa13.06□□□□□ -0.32
CBWD3-212ENST00000616550 LINC00337Q8N6G1 96 aa13.06□□□□□ -0.32
CBWD3-212ENST00000616550 ETDCA0A1B0GVM5 59 aa13.05□□□□□ -0.32
CBWD3-212ENST00000616550 SPRR1AP35321 89 aa13.05□□□□□ -0.32
CBWD3-212ENST00000616550 SPANXB1Q9NS25 103 aaPredicted RBP13.05□□□□□ -0.32
CBWD3-212ENST00000616550 NDUFC2O95298 119 aa13.04□□□□□ -0.32
CBWD3-212ENST00000616550 DDTP30046 118 aa13.04□□□□□ -0.32
CBWD3-212ENST00000616550 ADAMTSL4-AS1Q5T5F5 129 aa13.04□□□□□ -0.32
CBWD3-212ENST00000616550 TSPAN13O95857 204 aa13.03□□□□□ -0.32
CBWD3-212ENST00000616550 NPC2P61916 151 aa13.03□□□□□ -0.32
CBWD3-212ENST00000616550 KRTAP13-2Q52LG2 175 aa13.03□□□□□ -0.32
CBWD3-212ENST00000616550 C20orf202A1L168 122 aa13.02□□□□□ -0.33
CBWD3-212ENST00000616550 S100A1P23297 94 aa13.02□□□□□ -0.33
CBWD3-212ENST00000616550 S100A7L2Q5SY68 101 aa13.02□□□□□ -0.33
CBWD3-212ENST00000616550 ZNF815PA8K554 130 aa13□□□□□ -0.33
CBWD3-212ENST00000616550 KRTAP4-16G5E9R7 235 aaPredicted RBP13□□□□□ -0.33
CBWD3-212ENST00000616550 SOSTDC1Q6X4U4 206 aa13□□□□□ -0.33
CBWD3-212ENST00000616550 ZNF706Q9Y5V0 76 aaPredicted RBP13□□□□□ -0.33
CBWD3-212ENST00000616550 TIMM17BO60830 172 aa12.99□□□□□ -0.33
CBWD3-212ENST00000616550 EIF4EBP3O60516 100 aaPredicted RBP12.98□□□□□ -0.33
CBWD3-212ENST00000616550 PRR4Q16378 134 aa12.98□□□□□ -0.33
CBWD3-212ENST00000616550 SMCR5Q8TEV8 140 aa12.98□□□□□ -0.33
CBWD3-212ENST00000616550 SPRR4Q96PI1 79 aa12.98□□□□□ -0.33
CBWD3-212ENST00000616550 IGLV6-57P01721 117 aa12.96□□□□□ -0.33
CBWD3-212ENST00000616550 LITAFQ99732 161 aa12.96□□□□□ -0.33
CBWD3-212ENST00000616550 B5MCH6 92 aa12.95□□□□□ -0.34
CBWD3-212ENST00000616550 LINC00304Q8N9R0 145 aa12.95□□□□□ -0.34
CBWD3-212ENST00000616550 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
CBWD3-212ENST00000616550 TTTY13Q9BZ97 58 aa12.95□□□□□ -0.34
CBWD3-212ENST00000616550 AKR1D1P51857 326 aa12.94□□□□□ -0.34
CBWD3-212ENST00000616550 LRP2P98164 4655 aa12.92□□□□□ -0.34
CBWD3-212ENST00000616550 TRAV23DV6A0A075B6W5 121 aa12.92□□□□□ -0.34
CBWD3-212ENST00000616550 C3orf22Q8N5N4 141 aa12.92□□□□□ -0.34
CBWD3-212ENST00000616550 SPANXCQ9NY87 97 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms