RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SCXQ7RTU7 201 aa5.99□□□□□ -1.45
LIG4-204ENST00000611712 CR1P17927 2039 aa5.98□□□□□ -1.45
LIG4-204ENST00000611712 SERP2Q8N6R1 65 aa5.98□□□□□ -1.45
LIG4-204ENST00000611712 GCN1Q92616 2671 aaKnown RBP5.98□□□□□ -1.45
LIG4-204ENST00000611712 UTP20O75691 2785 aaKnown RBP5.98□□□□□ -1.45
LIG4-204ENST00000611712 FUSP35637 526 aaKnown RBP eCLIP5.98□□□□□ -1.45
LIG4-204ENST00000611712 C20orf197Q8N268 126 aa5.98□□□□□ -1.45
LIG4-204ENST00000611712 LYPD5Q6UWN5 251 aa5.97□□□□□ -1.45
LIG4-204ENST00000611712 Q6ZTC4 211 aa5.97□□□□□ -1.45
LIG4-204ENST00000611712 J3KT08 172 aa5.97□□□□□ -1.45
LIG4-204ENST00000611712 C10orf25Q5T742 122 aa5.97□□□□□ -1.45
LIG4-204ENST00000611712 M0R378 163 aa5.97□□□□□ -1.45
LIG4-204ENST00000611712 WFDC10BQ8IUB3 73 aa5.97□□□□□ -1.45
LIG4-204ENST00000611712 NANOS2P60321 138 aaKnown RBP5.96□□□□□ -1.45
LIG4-204ENST00000611712 LINC00575Q6W349 94 aa5.96□□□□□ -1.45
LIG4-204ENST00000611712 NBEAL2Q6ZNJ1 2754 aa5.96□□□□□ -1.45
LIG4-204ENST00000611712 CRYBG3Q68DQ2 2970 aa5.95□□□□□ -1.46
LIG4-204ENST00000611712 A0A0J9YWU9 116 aa5.95□□□□□ -1.46
LIG4-204ENST00000611712 EGFEM1PQ0D2K5 195 aa5.95□□□□□ -1.46
LIG4-204ENST00000611712 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
LIG4-204ENST00000611712 PPDPFQ9H3Y8 114 aa5.95□□□□□ -1.46
LIG4-204ENST00000611712 NHLRC4P0CG21 123 aaPredicted RBP5.95□□□□□ -1.46
LIG4-204ENST00000611712 KRTAP1-1Q07627 177 aa5.95□□□□□ -1.46
LIG4-204ENST00000611712 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.95□□□□□ -1.46
LIG4-204ENST00000611712 KRTAP10-3P60369 221 aa5.94□□□□□ -1.46
LIG4-204ENST00000611712 Q8NAQ8 132 aa5.94□□□□□ -1.46
LIG4-204ENST00000611712 FAM19A1Q7Z5A9 133 aa5.93□□□□□ -1.46
LIG4-204ENST00000611712 SETXQ7Z333 2677 aaKnown RBP5.93□□□□□ -1.46
LIG4-204ENST00000611712 BPY2O14599 106 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 PRB2P02812 416 aaPredicted RBP5.92□□□□□ -1.46
LIG4-204ENST00000611712 Q6ZRU5 148 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 LINC00612Q8N6U2 182 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 CSMD1Q96PZ7 3565 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 IGKV2-24A0A0C4DH68 120 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 C3orf84H3BNL1 204 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 LINC01600Q96MT4 127 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 C6orf48Q9UBA6 75 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 UNC79Q9P2D8 2635 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 RPL37AP8A6NKH3 93 aa5.92□□□□□ -1.46
LIG4-204ENST00000611712 NDUFC2-KCTD14E9PQ53 114 aa5.91□□□□□ -1.46
LIG4-204ENST00000611712 KIAA0087Q14695 138 aa5.91□□□□□ -1.46
LIG4-204ENST00000611712 FAM19A5Q7Z5A7 132 aaPredicted RBP5.91□□□□□ -1.46
LIG4-204ENST00000611712 TRAV10A0A0B4J240 114 aa5.91□□□□□ -1.46
LIG4-204ENST00000611712 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.47
LIG4-204ENST00000611712 TMEM258P61165 79 aa5.89□□□□□ -1.47
LIG4-204ENST00000611712 NF1P21359 2839 aa5.89□□□□□ -1.47
LIG4-204ENST00000611712 ESRGQ1W209 222 aa5.88□□□□□ -1.47
LIG4-204ENST00000611712 Q6ZVQ6 151 aa5.88□□□□□ -1.47
LIG4-204ENST00000611712 C2orf48Q96LS8 159 aa5.88□□□□□ -1.47
LIG4-204ENST00000611712 HIGD2AQ9BW72 106 aa5.88□□□□□ -1.47
LIG4-204ENST00000611712 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
LIG4-204ENST00000611712 SPATA3Q8NHX4 192 aa5.88□□□□□ -1.47
LIG4-204ENST00000611712 FBN2P35556 2912 aa5.87□□□□□ -1.47
LIG4-204ENST00000611712 UBR5O95071 2799 aaPredicted RBP5.87□□□□□ -1.47
LIG4-204ENST00000611712 LINC01547P58512 204 aaPredicted RBP5.87□□□□□ -1.47
LIG4-204ENST00000611712 ITPR2Q14571 2701 aa5.87□□□□□ -1.47
LIG4-204ENST00000611712 FAM236DA0A1B0GTK5 79 aa5.86□□□□□ -1.47
LIG4-204ENST00000611712 FAM236CP0DP71 79 aa5.86□□□□□ -1.47
LIG4-204ENST00000611712 DHRS4-AS1Q9P1J3 65 aa5.86□□□□□ -1.47
LIG4-204ENST00000611712 CELSR2Q9HCU4 2923 aa5.86□□□□□ -1.47
LIG4-204ENST00000611712 MAST4O15021 2626 aa5.86□□□□□ -1.47
LIG4-204ENST00000611712 APCP25054 2843 aa5.86□□□□□ -1.47
LIG4-204ENST00000611712 MXRA5Q9NR99 2828 aa5.86□□□□□ -1.47
LIG4-204ENST00000611712 CELSR1Q9NYQ6 3014 aa5.85□□□□□ -1.47
LIG4-204ENST00000611712 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.85□□□□□ -1.47
LIG4-204ENST00000611712 TRAV7A0A075B6U4 112 aa5.85□□□□□ -1.47
LIG4-204ENST00000611712 Q6ZQT0 140 aa5.85□□□□□ -1.47
LIG4-204ENST00000611712 PRR34Q9NV39 138 aa5.85□□□□□ -1.47
LIG4-204ENST00000611712 IGLV6-57P01721 117 aa5.84□□□□□ -1.47
LIG4-204ENST00000611712 CRYGAP11844 174 aa5.84□□□□□ -1.47
LIG4-204ENST00000611712 LINC01556Q5JQF7 62 aa5.84□□□□□ -1.47
LIG4-204ENST00000611712 GVQW2A0A096LPI5 108 aaPredicted RBP5.84□□□□□ -1.48
LIG4-204ENST00000611712 LOC107984640A0A0U1RRK4 108 aa5.83□□□□□ -1.48
LIG4-204ENST00000611712 H3BNG1 76 aa5.83□□□□□ -1.48
LIG4-204ENST00000611712 UBE2AP49459 152 aa5.83□□□□□ -1.48
LIG4-204ENST00000611712 SVEP1Q4LDE5 3571 aa5.83□□□□□ -1.48
LIG4-204ENST00000611712 ELOF1P60002 83 aaKnown RBP5.83□□□□□ -1.48
LIG4-204ENST00000611712 MGAM2Q2M2H8 2515 aa5.83□□□□□ -1.48
LIG4-204ENST00000611712 C7orf33Q8WU49 177 aa5.82□□□□□ -1.48
LIG4-204ENST00000611712 LOC110117498A0A087WWA1 95 aa5.81□□□□□ -1.48
LIG4-204ENST00000611712 A0A096LNI7 61 aa5.81□□□□□ -1.48
LIG4-204ENST00000611712 F8WDY8 70 aa5.81□□□□□ -1.48
LIG4-204ENST00000611712 VPREB1P12018 145 aa5.81□□□□□ -1.48
LIG4-204ENST00000611712 TEP1Q99973 2627 aaKnown RBP5.81□□□□□ -1.48
LIG4-204ENST00000611712 C1orf137Q5JT78 98 aa5.81□□□□□ -1.48
LIG4-204ENST00000611712 Q8N9L7 120 aa5.81□□□□□ -1.48
LIG4-204ENST00000611712 CDK2AP2O75956 126 aa5.81□□□□□ -1.48
LIG4-204ENST00000611712 CXCL6P80162 114 aa5.8□□□□□ -1.48
LIG4-204ENST00000611712 SPENQ96T58 3664 aaKnown RBP5.8□□□□□ -1.48
LIG4-204ENST00000611712 Q6ZRP5 223 aa5.8□□□□□ -1.48
LIG4-204ENST00000611712 C14orf177Q52M58 125 aa5.8□□□□□ -1.48
LIG4-204ENST00000611712 TRBV7-6A0A0J9YX20 115 aa5.79□□□□□ -1.48
LIG4-204ENST00000611712 KRTAP24-1Q3LI83 254 aa5.79□□□□□ -1.48
LIG4-204ENST00000611712 OBSCN-AS1Q96MR7 158 aa5.79□□□□□ -1.48
LIG4-204ENST00000611712 MRPL55Q7Z7F7 128 aaKnown RBP5.79□□□□□ -1.48
LIG4-204ENST00000611712 NOTCH1P46531 2555 aa5.79□□□□□ -1.48
LIG4-204ENST00000611712 LINC00167Q96N53 147 aa5.78□□□□□ -1.48
LIG4-204ENST00000611712 NDUFC1O43677 76 aa5.78□□□□□ -1.48
LIG4-204ENST00000611712 C22orf24Q9Y442 160 aa5.78□□□□□ -1.48
LIG4-204ENST00000611712 MP68P56378 58 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms