RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 TRACP01848 142 aa12.2□□□□□ -0.46
SNAPC3-207ENST00000610884 BAALC-AS2P0C853 105 aa12.2□□□□□ -0.46
SNAPC3-207ENST00000610884 LINC00158P58513 81 aa12.2□□□□□ -0.46
SNAPC3-207ENST00000610884 SMCR5Q8TEV8 140 aa12.2□□□□□ -0.46
SNAPC3-207ENST00000610884 CCL18P55774 89 aa12.19□□□□□ -0.46
SNAPC3-207ENST00000610884 KIAA0087Q14695 138 aa12.19□□□□□ -0.46
SNAPC3-207ENST00000610884 DNAH1Q9P2D7 4330 aa12.19□□□□□ -0.46
SNAPC3-207ENST00000610884 CASC10Q5T4H9 136 aa12.18□□□□□ -0.46
SNAPC3-207ENST00000610884 MIR7-3HGQ8N6C7 128 aa12.18□□□□□ -0.46
SNAPC3-207ENST00000610884 ACYP1P07311 99 aa12.18□□□□□ -0.46
SNAPC3-207ENST00000610884 UNQ6190/PRO20217Q6UXQ8 127 aa12.18□□□□□ -0.46
SNAPC3-207ENST00000610884 C22orf24Q9Y442 160 aa12.17□□□□□ -0.46
SNAPC3-207ENST00000610884 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
SNAPC3-207ENST00000610884 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
SNAPC3-207ENST00000610884 LINC01556Q5JQF7 62 aa12.16□□□□□ -0.46
SNAPC3-207ENST00000610884 LINC00337Q8N6G1 96 aa12.16□□□□□ -0.46
SNAPC3-207ENST00000610884 LECT2O14960 151 aa12.16□□□□□ -0.46
SNAPC3-207ENST00000610884 TRAV13-2A0A0B4J235 113 aa12.15□□□□□ -0.46
SNAPC3-207ENST00000610884 KRTAP26-1Q6PEX3 210 aa12.15□□□□□ -0.46
SNAPC3-207ENST00000610884 SND1-IT1Q9HBX3 110 aa12.15□□□□□ -0.46
SNAPC3-207ENST00000610884 IGKV2-28A0A075B6P5 120 aa12.14□□□□□ -0.47
SNAPC3-207ENST00000610884 IGKV2D-28P01615 120 aa12.14□□□□□ -0.47
SNAPC3-207ENST00000610884 SPAG11BQ08648 103 aa12.14□□□□□ -0.47
SNAPC3-207ENST00000610884 KRTAP1-5Q9BYS1 174 aa12.14□□□□□ -0.47
SNAPC3-207ENST00000610884 CFAP161Q6P656 301 aa12.13□□□□□ -0.47
SNAPC3-207ENST00000610884 Q8IZM0 81 aa12.13□□□□□ -0.47
SNAPC3-207ENST00000610884 RPL28P46779 137 aaKnown RBP12.13□□□□□ -0.47
SNAPC3-207ENST00000610884 PRR3P79522 188 aaKnown RBP12.13□□□□□ -0.47
SNAPC3-207ENST00000610884 SVIPQ8NHG7 77 aa12.13□□□□□ -0.47
SNAPC3-207ENST00000610884 DNAH10OSP0CZ25 163 aa12.12□□□□□ -0.47
SNAPC3-207ENST00000610884 GAGE2AQ6NT46 116 aa12.12□□□□□ -0.47
SNAPC3-207ENST00000610884 C1orf43Q9BWL3 253 aa12.12□□□□□ -0.47
SNAPC3-207ENST00000610884 APLNQ9ULZ1 77 aa12.12□□□□□ -0.47
SNAPC3-207ENST00000610884 LINC00643Q86TS7 51 aa12.11□□□□□ -0.47
SNAPC3-207ENST00000610884 A0A087WYN8 130 aa12.11□□□□□ -0.47
SNAPC3-207ENST00000610884 PPDPFQ9H3Y8 114 aa12.11□□□□□ -0.47
SNAPC3-207ENST00000610884 SMIM11BQ8TCY0 68 aa12.1□□□□□ -0.47
SNAPC3-207ENST00000610884 UBE2DNLQ8IWF7 75 aa12.1□□□□□ -0.47
SNAPC3-207ENST00000610884 IMUPQ9GZP8 106 aa12.1□□□□□ -0.47
SNAPC3-207ENST00000610884 DNAL4O96015 105 aa12.09□□□□□ -0.47
SNAPC3-207ENST00000610884 INAFM2P0DMQ5 153 aa12.09□□□□□ -0.47
SNAPC3-207ENST00000610884 KMT2AQ03164 3969 aa12.09□□□□□ -0.47
SNAPC3-207ENST00000610884 KLK5Q9Y337 293 aaPredicted RBP12.09□□□□□ -0.47
SNAPC3-207ENST00000610884 C15orf56Q8N910 161 aa12.08□□□□□ -0.48
SNAPC3-207ENST00000610884 DYNC2H1Q8NCM8 4307 aaKnown RBP12.07□□□□□ -0.48
SNAPC3-207ENST00000610884 C9orf129Q5T035 196 aaKnown RBP12.06□□□□□ -0.48
SNAPC3-207ENST00000610884 SDIM1Q6ZPB5 146 aa12.06□□□□□ -0.48
SNAPC3-207ENST00000610884 SMIM20Q8N5G0 67 aa12.06□□□□□ -0.48
SNAPC3-207ENST00000610884 Q8NDZ9 215 aa12.05□□□□□ -0.48
SNAPC3-207ENST00000610884 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
SNAPC3-207ENST00000610884 ZNF561-AS1K7EIQ3 104 aa12.05□□□□□ -0.48
SNAPC3-207ENST00000610884 M0R2N4 97 aa12.04□□□□□ -0.48
SNAPC3-207ENST00000610884 XAGE1AQ9HD64 81 aa12.04□□□□□ -0.48
SNAPC3-207ENST00000610884 C14orf132Q9NPU4 83 aa12.04□□□□□ -0.48
SNAPC3-207ENST00000610884 C6orf48Q9UBA6 75 aa12.04□□□□□ -0.48
SNAPC3-207ENST00000610884 OR13C6PQ8NH95 151 aa12.03□□□□□ -0.48
SNAPC3-207ENST00000610884 Q6ZRU5 148 aa12.03□□□□□ -0.48
SNAPC3-207ENST00000610884 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.48
SNAPC3-207ENST00000610884 LINC01561Q8N1V8 128 aa12□□□□□ -0.49
SNAPC3-207ENST00000610884 H0YGX0 51 aa12□□□□□ -0.49
SNAPC3-207ENST00000610884 SLPIP03973 132 aa12□□□□□ -0.49
SNAPC3-207ENST00000610884 UPK3BQ9BT76 320 aa11.99□□□□□ -0.49
SNAPC3-207ENST00000610884 CXCL5P42830 114 aa11.99□□□□□ -0.49
SNAPC3-207ENST00000610884 USP17L23D6RBM5 183 aa11.98□□□□□ -0.49
SNAPC3-207ENST00000610884 C9orf153Q5TBE3 101 aa11.98□□□□□ -0.49
SNAPC3-207ENST00000610884 NCR3O14931 201 aa11.98□□□□□ -0.49
SNAPC3-207ENST00000610884 NUPR2A6NF83 97 aa11.97□□□□□ -0.49
SNAPC3-207ENST00000610884 KRTAP21-3Q3LHN1 58 aa11.97□□□□□ -0.49
SNAPC3-207ENST00000610884 C3orf22Q8N5N4 141 aa11.97□□□□□ -0.49
SNAPC3-207ENST00000610884 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
SNAPC3-207ENST00000610884 IGKV3D-7A0A0C4DH55 119 aa11.94□□□□□ -0.5
SNAPC3-207ENST00000610884 LINC00846Q9NV44 126 aa11.94□□□□□ -0.5
SNAPC3-207ENST00000610884 UQCRQO14949 82 aa11.94□□□□□ -0.5
SNAPC3-207ENST00000610884 OBSCN-AS1Q96MR7 158 aa11.94□□□□□ -0.5
SNAPC3-207ENST00000610884 FUSP35637 526 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNAPC3-207ENST00000610884 ORMDL1Q9P0S3 153 aa11.92□□□□□ -0.5
SNAPC3-207ENST00000610884 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.91□□□□□ -0.5
SNAPC3-207ENST00000610884 Q6ZRP5 223 aa11.91□□□□□ -0.5
SNAPC3-207ENST00000610884 PSCAO43653 123 aa11.91□□□□□ -0.5
SNAPC3-207ENST00000610884 SYCNQ0VAF6 134 aa11.9□□□□□ -0.5
SNAPC3-207ENST00000610884 HIST1H4AP62805 103 aaKnown RBP11.89□□□□□ -0.51
SNAPC3-207ENST00000610884 VPS13DQ5THJ4 4388 aa11.89□□□□□ -0.51
SNAPC3-207ENST00000610884 GVQW2A0A096LPI5 108 aaPredicted RBP11.89□□□□□ -0.51
SNAPC3-207ENST00000610884 COX7CP15954 63 aa11.89□□□□□ -0.51
SNAPC3-207ENST00000610884 COX17Q14061 63 aa11.89□□□□□ -0.51
SNAPC3-207ENST00000610884 A0A087WVE0 104 aa11.88□□□□□ -0.51
SNAPC3-207ENST00000610884 ATOX1O00244 68 aa11.88□□□□□ -0.51
SNAPC3-207ENST00000610884 RPL18AQ02543 176 aaKnown RBP11.87□□□□□ -0.51
SNAPC3-207ENST00000610884 Q6JHZ5 121 aa11.87□□□□□ -0.51
SNAPC3-207ENST00000610884 C2orf48Q96LS8 159 aa11.87□□□□□ -0.51
SNAPC3-207ENST00000610884 HYDINQ4G0P3 5121 aa11.87□□□□□ -0.51
SNAPC3-207ENST00000610884 NBDYA0A0U1RRE5 68 aa11.86□□□□□ -0.51
SNAPC3-207ENST00000610884 MUC7Q8TAX7 377 aa11.85□□□□□ -0.51
SNAPC3-207ENST00000610884 DNAH2Q9P225 4427 aa11.85□□□□□ -0.51
SNAPC3-207ENST00000610884 FAM168BA1KXE4 195 aa11.84□□□□□ -0.51
SNAPC3-207ENST00000610884 A0A1B0GX51 115 aa11.83□□□□□ -0.52
SNAPC3-207ENST00000610884 LY6G6CO95867 125 aa11.83□□□□□ -0.52
SNAPC3-207ENST00000610884 Q8N814 137 aa11.83□□□□□ -0.52
SNAPC3-207ENST00000610884 RMI2Q96E14 147 aa11.83□□□□□ -0.52
SNAPC3-207ENST00000610884 NDUFC2-KCTD14E9PQ53 114 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms