RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 HIST1H2BOP23527 126 aa10.28□□□□□ -0.76
PRKN-208ENST00000610470 HIST1H2BBP33778 126 aa10.28□□□□□ -0.76
PRKN-208ENST00000610470 HIST1H2BDP58876 126 aa10.28□□□□□ -0.76
PRKN-208ENST00000610470 HIST1H2BCP62807 126 aa10.28□□□□□ -0.76
PRKN-208ENST00000610470 HIST2H2BEQ16778 126 aa10.28□□□□□ -0.76
PRKN-208ENST00000610470 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.28□□□□□ -0.76
PRKN-208ENST00000610470 KRTAP13-1Q8IUC0 172 aa10.28□□□□□ -0.76
PRKN-208ENST00000610470 HIST1H2BHQ93079 126 aa10.28□□□□□ -0.76
PRKN-208ENST00000610470 HIST1H2BNQ99877 126 aa10.28□□□□□ -0.76
PRKN-208ENST00000610470 HIST1H2BMQ99879 126 aa10.28□□□□□ -0.76
PRKN-208ENST00000610470 A0A087X002 238 aa10.27□□□□□ -0.77
PRKN-208ENST00000610470 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
PRKN-208ENST00000610470 LEPROTL1O95214 131 aa10.27□□□□□ -0.77
PRKN-208ENST00000610470 VPREB1P12018 145 aa10.27□□□□□ -0.77
PRKN-208ENST00000610470 S100A1P23297 94 aa10.27□□□□□ -0.77
PRKN-208ENST00000610470 PRR4Q16378 134 aa10.27□□□□□ -0.77
PRKN-208ENST00000610470 ZNF625Q96I27 306 aaPredicted RBP10.27□□□□□ -0.77
PRKN-208ENST00000610470 ATP6V1G1O75348 118 aa10.26□□□□□ -0.77
PRKN-208ENST00000610470 FABP4P15090 132 aa10.26□□□□□ -0.77
PRKN-208ENST00000610470 TYMSOSQ8TAI1 123 aa10.26□□□□□ -0.77
PRKN-208ENST00000610470 H0Y8G0 127 aa10.25□□□□□ -0.77
PRKN-208ENST00000610470 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
PRKN-208ENST00000610470 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
PRKN-208ENST00000610470 TSPAN13O95857 204 aa10.23□□□□□ -0.77
PRKN-208ENST00000610470 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
PRKN-208ENST00000610470 HSPB8Q9UJY1 196 aa10.23□□□□□ -0.77
PRKN-208ENST00000610470 TMEM223A0PJW6 202 aa10.22□□□□□ -0.77
PRKN-208ENST00000610470 LINC00158P58513 81 aa10.22□□□□□ -0.77
PRKN-208ENST00000610470 FAM229BQ4G0N7 80 aa10.22□□□□□ -0.77
PRKN-208ENST00000610470 FAM19A1Q7Z5A9 133 aa10.22□□□□□ -0.77
PRKN-208ENST00000610470 ANAPC11Q9NYG5 84 aa10.21□□□□□ -0.77
PRKN-208ENST00000610470 TMEM238C9JI98 176 aa10.2□□□□□ -0.78
PRKN-208ENST00000610470 PRLHP81277 87 aa10.2□□□□□ -0.78
PRKN-208ENST00000610470 M0R378 163 aa10.19□□□□□ -0.78
PRKN-208ENST00000610470 Q8NDZ9 215 aa10.19□□□□□ -0.78
PRKN-208ENST00000610470 KRTAP13-2Q52LG2 175 aa10.18□□□□□ -0.78
PRKN-208ENST00000610470 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
PRKN-208ENST00000610470 PMCHL2Q9BQD1 86 aa10.17□□□□□ -0.78
PRKN-208ENST00000610470 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
PRKN-208ENST00000610470 IGKV2D-26A0A0A0MRZ7 120 aa10.16□□□□□ -0.78
PRKN-208ENST00000610470 SMIM13P0DJ93 91 aa10.15□□□□□ -0.78
PRKN-208ENST00000610470 HERV-K104P63124 156 aa10.15□□□□□ -0.78
PRKN-208ENST00000610470 MEIG1Q5JSS6 88 aa10.15□□□□□ -0.78
PRKN-208ENST00000610470 LINC00587B1AMM8 73 aa10.14□□□□□ -0.79
PRKN-208ENST00000610470 COA6Q5JTJ3 125 aaKnown RBP10.14□□□□□ -0.79
PRKN-208ENST00000610470 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
PRKN-208ENST00000610470 DPM2O94777 84 aa10.13□□□□□ -0.79
PRKN-208ENST00000610470 PLNP26678 52 aa10.13□□□□□ -0.79
PRKN-208ENST00000610470 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
PRKN-208ENST00000610470 BOD1L2Q8IYS8 172 aa10.12□□□□□ -0.79
PRKN-208ENST00000610470 HIGD2AQ9BW72 106 aa10.12□□□□□ -0.79
PRKN-208ENST00000610470 MYMXA0A1B0GTQ4 84 aa10.11□□□□□ -0.79
PRKN-208ENST00000610470 SYS1-DBNDD2H3BUS1 97 aa10.11□□□□□ -0.79
PRKN-208ENST00000610470 IGKCP01834 107 aa10.11□□□□□ -0.79
PRKN-208ENST00000610470 MIR7-3HGQ8N6C7 128 aa10.11□□□□□ -0.79
PRKN-208ENST00000610470 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
PRKN-208ENST00000610470 PRYO14603 147 aa10.1□□□□□ -0.79
PRKN-208ENST00000610470 CTAG1AP78358 180 aa10.09□□□□□ -0.79
PRKN-208ENST00000610470 NCR3O14931 201 aa10.08□□□□□ -0.8
PRKN-208ENST00000610470 ZNF706Q9Y5V0 76 aaPredicted RBP10.08□□□□□ -0.8
PRKN-208ENST00000610470 LEPROTO15243 131 aa10.07□□□□□ -0.8
PRKN-208ENST00000610470 C3orf79P0CE67 100 aa10.07□□□□□ -0.8
PRKN-208ENST00000610470 TSPEAR-AS2P59090 65 aa10.07□□□□□ -0.8
PRKN-208ENST00000610470 HERVK_113P61574 105 aa10.06□□□□□ -0.8
PRKN-208ENST00000610470 LINC01545Q5VT33 79 aa10.06□□□□□ -0.8
PRKN-208ENST00000610470 PET117Q6UWS5 81 aa10.06□□□□□ -0.8
PRKN-208ENST00000610470 LINC00337Q8N6G1 96 aa10.06□□□□□ -0.8
PRKN-208ENST00000610470 SPRR4Q96PI1 79 aa10.06□□□□□ -0.8
PRKN-208ENST00000610470 KCNQ1DNQ9H478 68 aa10.06□□□□□ -0.8
PRKN-208ENST00000610470 SPRR1AP35321 89 aa10.05□□□□□ -0.8
PRKN-208ENST00000610470 KRTDAPP60985 99 aa10.05□□□□□ -0.8
PRKN-208ENST00000610470 S100A12P80511 92 aa10.05□□□□□ -0.8
PRKN-208ENST00000610470 C3orf22Q8N5N4 141 aa10.05□□□□□ -0.8
PRKN-208ENST00000610470 RETNLBQ9BQ08 111 aa10.05□□□□□ -0.8
PRKN-208ENST00000610470 MUC2Q02817 5179 aa10.05□□□□□ -0.8
PRKN-208ENST00000610470 ETDCA0A1B0GVM5 59 aa10.04□□□□□ -0.8
PRKN-208ENST00000610470 J3QQQ9 107 aa10.04□□□□□ -0.8
PRKN-208ENST00000610470 TRBV10-3A0A0K0K1G6 114 aa10.02□□□□□ -0.81
PRKN-208ENST00000610470 SPAG11AQ6PDA7 123 aa10.02□□□□□ -0.81
PRKN-208ENST00000610470 LOC107984156A0A0G2JMH3 177 aa10.01□□□□□ -0.81
PRKN-208ENST00000610470 LGALS3P17931 250 aaKnown RBP10.01□□□□□ -0.81
PRKN-208ENST00000610470 NMUP48645 174 aa10.01□□□□□ -0.81
PRKN-208ENST00000610470 ARL17AQ8IVW1 177 aa10.01□□□□□ -0.81
PRKN-208ENST00000610470 SMCR5Q8TEV8 140 aa10.01□□□□□ -0.81
PRKN-208ENST00000610470 E9PLD3 99 aa10□□□□□ -0.81
PRKN-208ENST00000610470 KRTAP4-16G5E9R7 235 aaPredicted RBP10□□□□□ -0.81
PRKN-208ENST00000610470 HIST3H2BBQ8N257 126 aa10□□□□□ -0.81
PRKN-208ENST00000610470 DAND5Q8N907 189 aa10□□□□□ -0.81
PRKN-208ENST00000610470 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
PRKN-208ENST00000610470 TRBV10-2A0A0K0K1G8 114 aa9.99□□□□□ -0.81
PRKN-208ENST00000610470 A0A0U1RQV1 116 aa9.99□□□□□ -0.81
PRKN-208ENST00000610470 C4orf48Q5BLP8 95 aa9.99□□□□□ -0.81
PRKN-208ENST00000610470 MIEN1Q9BRT3 115 aa9.99□□□□□ -0.81
PRKN-208ENST00000610470 S100A6P06703 90 aa9.98□□□□□ -0.81
PRKN-208ENST00000610470 DDTP30046 118 aa9.98□□□□□ -0.81
PRKN-208ENST00000610470 TPRXLQ17RH7 258 aa9.98□□□□□ -0.81
PRKN-208ENST00000610470 S100A2P29034 98 aa9.97□□□□□ -0.81
PRKN-208ENST00000610470 SPANXB1Q9NS25 103 aaPredicted RBP9.97□□□□□ -0.81
PRKN-208ENST00000610470 C20orf202A1L168 122 aa9.96□□□□□ -0.82
PRKN-208ENST00000610470 HIST1H2BLQ99880 126 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms